Spav010217.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:1875189-1883330[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.00096 1.2 9.5 0.1 14 29 141 156 134 164 0.79 2 6 7.2e-05 0.092 13.1 1.6 6 43 201 234 196 235 0.80 3 6 0.00012 0.16 12.3 3.7 10 43 243 271 234 272 0.83 4 6 0.00078 1 9.7 3.2 6 44 271 305 270 305 0.86 5 6 0.24 3.1e+02 1.8 0.6 22 44 315 334 308 334 0.75 6 6 0.0038 4.9 7.5 2.5 13 43 341 368 337 369 0.80
Sequence Information
- Coding Sequence
- ATGGATAACAATGAACATCCAGCACTCAGCTGTGAAACATTGAGTAACACAGCTCCAGAGGTACAGAGCAATATATGTACGCCAACAATGAAAGTAGACCTTAAAGAGGAAACAACATCAGAGAGCAGAGATGAAGAAGAATCACCTTGCCATaactttaagTATCCACCTGAGCCCTTGGATTCACCAGAGTATGTAAATTATTATGATGATAATATTGATATGTTGGAAGACCTGAAGAAGGAATATCCTGAGGATGAAAGCCCTCAATCAGACTGCAATATGACTGATGTAAATGTTTCTGAAGATGCAAATTGGAATAGAAATAAGCAGATTACCATAAAAACGGAGAGACTAGAAGAGCAAGACATTACGGATAGTTCTGGAGCCACTAGCGTACATTATGACGTCCTAGTAACTCTTCAAGAAGTTAAATGCAATTTATGTGGTAGAATATTCAATAATGATTACAATTTATTAAAGCACAATAATGATCACATAAAAATTAAAATAAACACACCAGCGGATAATGACATTAATGAGTTGCACCAGCGCCAATATTGTGGGAAAGGTTTTATTAACTATGATGATATGCTTGCACACGTCATTGATGTTCATAGCGAGAATAATCCCAAATGTAAAATATGCGGAAAGCAATTTAATAACGAAAGGAATCTTGAACGTCACTTCAAACTTTCACACAAACTTAAGAAGTTCCAAAAACAAGTAACTGCAAAGGATATGAAATGTATATATTGCAATGCAGATTTCAAACGTAAATCCAGATTGAATAACCATATAAGGGTACGTCACATGGATAAAGTGGATGAGGAAATTAAATACAAGTGTGACTCATGCGGTCGCATTTATAAACGTAAAGGAGCCTTAATATCTCATATAAAAAAGACTCATAATGACTATCGGAAGATGTTTGAATGTTGGTGCGGGAAGCAGTTTCGTACCCAGAGGATCTTACGTGCGCATATAATTCGGCAGCATAATGGCGAAATGAACGATAAAAATAACGACAAAGTTCAATGTGAACATTGCCAAAAATTGTACAAATCCCAATACTATTTATCAATGCATATAAAACATGTTCACTATGATTATGGTGAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGATGTACTTAAAGCAACATAAGAGACGGCACACTGACGGTAACATTATTGATGAAATTATAGAGATTGAATAA
- Protein Sequence
- MDNNEHPALSCETLSNTAPEVQSNICTPTMKVDLKEETTSESRDEEESPCHNFKYPPEPLDSPEYVNYYDDNIDMLEDLKKEYPEDESPQSDCNMTDVNVSEDANWNRNKQITIKTERLEEQDITDSSGATSVHYDVLVTLQEVKCNLCGRIFNNDYNLLKHNNDHIKIKINTPADNDINELHQRQYCGKGFINYDDMLAHVIDVHSENNPKCKICGKQFNNERNLERHFKLSHKLKKFQKQVTAKDMKCIYCNADFKRKSRLNNHIRVRHMDKVDEEIKYKCDSCGRIYKRKGALISHIKKTHNDYRKMFECWCGKQFRTQRILRAHIIRQHNGEMNDKNNDKVQCEHCQKLYKSQYYLSMHIKHVHYDYGEVFECWCGKQFRTPMYLKQHKRRHTDGNIIDEIIEIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317638;
- 90% Identity
- iTF_01317638;
- 80% Identity
- iTF_01317638;