Spav018518.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383905.1:3554825-3563449[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.11 1.4e+02 2.9 0.1 33 44 7 18 3 18 0.90 2 6 1.2e-06 0.0015 18.8 1.3 3 44 205 239 203 239 0.94 3 6 1.6e-05 0.021 15.1 0.5 3 44 273 306 271 306 0.93 4 6 4.1e-07 0.00053 20.2 2.6 15 44 351 381 341 381 0.89 5 6 5.4e-06 0.007 16.6 0.4 3 43 516 556 514 557 0.91 6 6 0.0022 2.8 8.3 0.3 11 29 599 617 595 632 0.73
Sequence Information
- Coding Sequence
- ATGCGTATGGGTGATTATAGTAGTATGAGAAGACACATTCGTTTAAAGCATCCGTATATTTATGATGAAGAAAGGATAAAATATTGCAAGGAAAAAAATAAAAAGAGCACTGAATGCAAGGAAACCCCAGAAAACGAAATAGAATACGTAGTGGAGTACATCGATTCGAATGATCCACTATTAGAGACTGATACAATAATTAGTGCAATAGAATCACACGATAACGAATTGAACGACAGTGATGTGAATCTTTCTAGCCGTCAAGCAAACACGGATGTGGAAGAAAATGAAGAATCTAAACATACTGGTGATTCAGATGATGCAGAGTATTTTGAAACAAATGATACTCTACGTGACAGTGATCCCCTAAATGAAGATGAAATTAAACGACTTTGCACTAAGGAGGTCATAGAAAAGGACATGACAGAAAAACAAAACTCCTACGAATTTATCGAAACGGTAGCCGGTCTACTAATGTTTCAAGGGTACACTTACACTCAAAACAAACGTAAGAGGTCATGCTACTACTGTTCGAGGAGAAATTTAAGTTGCAGAAGCAGACTTAAGTTAGACGATAACTGCACAATTATAAATACCAAACTGAAATCGTATTTGTGGAAGTTCTTCAACAAAACGGATGGAAAATATGCAATTTGTAAAATATGCAACAAAGTAGTATATGCTCATATGCCGAGACACTTGCAGCGTTTACATCCTGAATCTTACATGGAATGGCGAAGACACAGAAATCGTCCGAAGAAACAAAGTTCACATTCAGACACTGAATTTACGGACCGTGGCAACAACAGGAGTTTTATATGGCTGTTTTTTGACAAAATAGATGGAATGGCTATTTGCAAAATATGTGGCGTTAGTATGAAGTGCAATATGTCAAGGCATTTGTTATACAAGCATCCTAAAACTCACAAAAAATGGCAAAATATAAGAAAAAAGAATAATGAATGCACATCGTTGAATGAAGACAACCCAGCAAAATTAGTAAACACTCGCCGCGGATGGATAAAACAATACATGAAAAGAACGGGCATCAATATGTTCCGTTGTGAATTATGTCACAAAATACTGAAAATGTGTGTAGGAGATTATAGTAATATGAAAAGACACATTCGCGTAAAACATCCTTATACTTATGATCAAGAAATGAGAGAATATTGGGATGCAAAAAAGAAAAAGAGCACTGAAACCAAGGAAAACACAGAAAACGTTATAGAATACGTAGTGGAATATATCGATTCTAATGATCCACTTTTAGAAACTGATACAATACTTAGTGCAATAGAAACACATGATAACGAATTGAACGACAGTGATGAGAATCCTTCTAGTCGTCAGTCAAATACCAGAACGGAAGAAAATGAAAAAAATGAAGAATCTAAGCATACTGATGATTCAGATGATGCGAACGATGCGGAATATTTTGGAACAGACAACACCCTACGTGAAAATGATCCCTTAATTGAACATAAAATTAAACTGCTTTGTACTAAGGAGGTTGAAGGGAAAAGGCATAGATCTAAAACATGCTTTTGGAATTTCTTTGATGTTTTGGTTGAAAACCACTTGTATAAATGTTTATTTTGTGGAAAGCAAGTGGCTACATTTCCAAAAAGTGTTGGAAATCTGAAACGACATATTGCAACCTTACACGCCTGGCAATATGACTTAATTATTAAATATGCGCCCATGTATGACACTTGTAAATTGTCTACACCAAAATATACGAAAATAAAGAAACCAGTAACTATGGAACGTACTAGTAACACAGACTTTGACATTTTGGATCGTGGTTGCTTTAAATGTAAGATATGCGAAAAGGTTATTGTCTGTGGTGATGACGAGAAGATTATTTTTGATCACGTTAAAGAAGAACACCCTGATCGTGTTGTCGTATGCAATAGTCAAGACCTACTGAACGACGATAATCAAGAAGAAGTGGTCATCTATGAAGAACAAGATTCATGTATTGTAGAAAGTTAA
- Protein Sequence
- MRMGDYSSMRRHIRLKHPYIYDEERIKYCKEKNKKSTECKETPENEIEYVVEYIDSNDPLLETDTIISAIESHDNELNDSDVNLSSRQANTDVEENEESKHTGDSDDAEYFETNDTLRDSDPLNEDEIKRLCTKEVIEKDMTEKQNSYEFIETVAGLLMFQGYTYTQNKRKRSCYYCSRRNLSCRSRLKLDDNCTIINTKLKSYLWKFFNKTDGKYAICKICNKVVYAHMPRHLQRLHPESYMEWRRHRNRPKKQSSHSDTEFTDRGNNRSFIWLFFDKIDGMAICKICGVSMKCNMSRHLLYKHPKTHKKWQNIRKKNNECTSLNEDNPAKLVNTRRGWIKQYMKRTGINMFRCELCHKILKMCVGDYSNMKRHIRVKHPYTYDQEMREYWDAKKKKSTETKENTENVIEYVVEYIDSNDPLLETDTILSAIETHDNELNDSDENPSSRQSNTRTEENEKNEESKHTDDSDDANDAEYFGTDNTLRENDPLIEHKIKLLCTKEVEGKRHRSKTCFWNFFDVLVENHLYKCLFCGKQVATFPKSVGNLKRHIATLHAWQYDLIIKYAPMYDTCKLSTPKYTKIKKPVTMERTSNTDFDILDRGCFKCKICEKVIVCGDDEKIIFDHVKEEHPDRVVVCNSQDLLNDDNQEEVVIYEEQDSCIVES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -