Spav017996.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Saturnia pavonia
Gene Symbol
-
Assembly
GCA_947532125.1
Location
OX383919.1:3693175-3695788[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-07 0.00029 20.8 0.0 5 41 29 66 28 67 0.92

Sequence Information

Coding Sequence
atgaataataccaagcctaaaagcacgaagaaaaaaagaagagttataggatcaagaacatacagagattattcagatgtaatgttggaattagctgtagatatggttaaaaaaaacaagatgtccagtcgggacgcagaaaaaagatttgggatccctcgacggacaatattaaataaagttaaaaacatacatatgaaacctgctggggggcaaaaaaaacttactaatgaagaggaagagaaactggcaaacgtgttgatagcttcagcagattacggcagccccatgacgaaaatggatttaaaaatgttagtctataaatatgttgaaaaaaattcacgaactgatttgttcgatggcaaattacccagtgatgcgtgGGTAGATGGGTTTTTGAACAGACACAGGTCCAAATTGACCATCAGAATTACTCAAAACATAAAAAAAGTACGGGTTGAGAAAGGGTTAGAAGAAATGGAACGTTTCTTTATCAATTTAAGTAAAACCTTAAAGGATGTACCACCAACCAACATACTAAACTACGACGAGACTAATTTGTCAGACAATCCAGGTAATTTAAAGTGTGTTTTTAGAAGGGGCGTTAAACACCCTGAAAGAATTTTAAATAGCACAAAAAGTTGCGTTTCTGTCATGTTTACTGTAACCGCATCTGGGAAGTGCTTACCAACATATGTGGTTTATAAATCCACAAATTTATACTCTGAGTGGCTTGAAGGAGGCCCAGATGGAACAAGGTACAATTGTTCAAAATCCGGGTGGTTTGATACTGCCTCATTCGAAGACTATTTCAAGACCATAGTGATTGAGTGGGCGAAACAAACTCTTGGGTCAAAAGTAGTCATTGGTGACAACTTGTCGTCCCATATAAATATCGAAGTTGTGGAGTTGTGTGAAAAGCATAATATAAAGTTAGTATTTTTACCACCAAACACTACTCACTTAACACAACCGCTCGACGTAGCGTACTTTGGACCATTAAAACGCGAATGGAAAAATATCCTATTAGATTATAAATTAAAGAATCCAGGACAAACCTCTTTGAATAAAAAACATTTTCCAAAACTTTTGGCTCAGTTATTAGAAAAAATGAAATACAAGGAAAGTAATAACATAACAAGTGGGTTTAGAGCCACAGGCATCTGGCCCCTAAATCCAAGAAATGTTTTCAAAAGAATTCCTGAGTATTTTGACGATACACAACATGGGATAGATACAACTTTGTTGGAATATCTCAAAGAAACAAGGGCCCCTAAACCAATGAAAGTTAGAAGAAACAAAAAAATACGAATAGAACCTGGAAAGTCAGTGTGTGTCAACGATATCTTGAGAAAAAGAAACAGCCCACAGAGATCAAGAAAAAAGGTATCTGTTAGAAATACCCAAATAGAGAAAACAACAGACGATACGAACCAAAACAAAGAGACAGATGAGATTATGGAGTTGTACACAGAGAATGAAATATATTTAGATGAAATTACAGGTGAAATGATAAAAGACAACAAAAATATTGAAAAGTTAGAATACGACATGTCATCGAGCTCCACTGAAATTATCAGTTTTGAAAAACCAGCATTTCTGCCACAGTTTTCATCTGTGAATAGTAATCCAGATAGACTTGGTGTAATTTGTATAAAATTGATCAACATGAATTTAGGTCTCATCGCGCACGATACTAACGCGCAAACATCAGTACGCTTGTTAAATAAAACTTTCAAAAGAAATAATGAGAATAGGTCCTTCGTAGCTATCAATGAAAATTATTTGCCAAAATGTTTACGAAGAAATGCAAATAGTTCATTGAAATCTAAAGTGACAATAACCTCAGATGTAAAAATATCTTCTAAGGAAATAAATCACACAAGGAACTTAACAGAACTAGGCAATAAATTCATAAGGCAATCAGCTTTACAAATGAAAATATTTGCAAAGGAAGTGGAAACAAACTCTGAATTAAATAGTATTCAAAAGACAAATAATGAAAACATCAATATGCCCCGTGCAAATGGTAAAAGAACACGAAAAAATAAGATTACAACGAGCTCTGAAAATTCTGACGTTGTGGAAATCGCAGACACAGATCATTCTGAATATGAGACATATGATGAATATATAGAAACATGTTTAAATGAAATAGAAGATAAGGAAAACTTGGAACTTGATAACATCACTACACCATTTGGGTTCAGCGATGTCATTTACTTTACAAGCGATGCCAATTTAAAAGAATATGATGTTCCTACTGTAAAATTTGCTAGAAAAGTAAAAAATTCAAAAGATGGTAGAATGGTCTTCACATACCCAAACGTGGAGGACGTATGTGAAGTGAATCTTGATGATGTGGAAATAGTGTTACCTAAACCAAATATTTCTAGACGAGGCCAAATAATCTTTAATATTTCTATGAATCCTTCTTACAACATACAATAA
Protein Sequence
MNNTKPKSTKKKRRVIGSRTYRDYSDVMLELAVDMVKKNKMSSRDAEKRFGIPRRTILNKVKNIHMKPAGGQKKLTNEEEEKLANVLIASADYGSPMTKMDLKMLVYKYVEKNSRTDLFDGKLPSDAWVDGFLNRHRSKLTIRITQNIKKVRVEKGLEEMERFFINLSKTLKDVPPTNILNYDETNLSDNPGNLKCVFRRGVKHPERILNSTKSCVSVMFTVTASGKCLPTYVVYKSTNLYSEWLEGGPDGTRYNCSKSGWFDTASFEDYFKTIVIEWAKQTLGSKVVIGDNLSSHINIEVVELCEKHNIKLVFLPPNTTHLTQPLDVAYFGPLKREWKNILLDYKLKNPGQTSLNKKHFPKLLAQLLEKMKYKESNNITSGFRATGIWPLNPRNVFKRIPEYFDDTQHGIDTTLLEYLKETRAPKPMKVRRNKKIRIEPGKSVCVNDILRKRNSPQRSRKKVSVRNTQIEKTTDDTNQNKETDEIMELYTENEIYLDEITGEMIKDNKNIEKLEYDMSSSSTEIISFEKPAFLPQFSSVNSNPDRLGVICIKLINMNLGLIAHDTNAQTSVRLLNKTFKRNNENRSFVAINENYLPKCLRRNANSSLKSKVTITSDVKISSKEINHTRNLTELGNKFIRQSALQMKIFAKEVETNSELNSIQKTNNENINMPRANGKRTRKNKITTSSENSDVVEIADTDHSEYETYDEYIETCLNEIEDKENLELDNITTPFGFSDVIYFTSDANLKEYDVPTVKFARKVKNSKDGRMVFTYPNVEDVCEVNLDDVEIVLPKPNISRRGQIIFNISMNPSYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-