Spav011725.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383923.1:710406-711540[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-06 0.00044 20.2 0.0 3 38 18 52 16 56 0.90 2 2 5.9 2.6e+03 -1.5 0.0 12 22 103 114 99 115 0.58
Sequence Information
- Coding Sequence
- ATGTCGGGAACTCGGAGAAGGAGCCAAGGATTGAAAGTAAAATGGAACCAAGATGATTTGAGTAAGGCATTCAAACTCGTTAAAGATGGAACAGCAATAAGAGAGGCAGCTCGGACTTGTGGCGTCCCGTTTTCAACCCTCCAAGAAAGACTGAAATACAAGAACTGTGAATTACCATCTTTGGGAAGAAATCCAGTATTTACGAAGGAGCAAGAAGCGGAAATGGCAGACACGATAAAATTCCTTGATCTTAGAATGGCCGGAAAATTTTGGATTCAAGGATTTATGAAAAGAAATAGCTTGTCTGTTCGAAAAGCAGAAGGAACGAGTCTGAACAGAGCTACAGCTTTTAACAAGAATGAAGTTACTGTATTTTTCAAGCTGCTAGAAGCATTGATGGAGAAATATAAGTTCTTACCAAGGAATATCTATAACGTCGACGAGACAGGTATCTCCTCTGTGCAAGACCCAGGGAAAATTATCACTCAAAAAGGACAAAAACGTGTGGGATCTTTGACTTCCGGTGAAAGAGGAAAGAATGTAACAGCTGTGTGTGCAGTAAATGCTACTGGGGTTTACCTTCCTCCAATGTTTATTTATCCTCGTCAGACACATTCACCAGCCTTGGAATACGATGGTCCACGTGGCGCTATATACCGCTGCTCGAAGAATGGGTGGATCAATGAAAACCTATTTACAGATTGGCTAAAGCATTTCGCGGAATTCACAAAACCATCACAAAATGAACCAATACTACTCATACTTGATAACCATAGCAGTCATATCTCTTTGAGATCTTATGAATTCTGCAAAAAGAACAACATAATAATGCTGTCGTTACCACCGCACGGCTCCCACCGAATGCAGCCTTTGGATGTGACCATTTATGGTCCATTGAAAGCTGCTTACAAACAAGAATGTAATCTTTTTATGAAAAATAAACTGGGAATGAAGATCACACAAAACCACATTGCTTCGCTTTTCAGAAAAGCGTACCAAAAGGTAGCGACAATCCCTAAAGCTGAAGCAGGATTTGCTGCTACTTGA
- Protein Sequence
- MSGTRRRSQGLKVKWNQDDLSKAFKLVKDGTAIREAARTCGVPFSTLQERLKYKNCELPSLGRNPVFTKEQEAEMADTIKFLDLRMAGKFWIQGFMKRNSLSVRKAEGTSLNRATAFNKNEVTVFFKLLEALMEKYKFLPRNIYNVDETGISSVQDPGKIITQKGQKRVGSLTSGERGKNVTAVCAVNATGVYLPPMFIYPRQTHSPALEYDGPRGAIYRCSKNGWINENLFTDWLKHFAEFTKPSQNEPILLILDNHSSHISLRSYEFCKKNNIIMLSLPPHGSHRMQPLDVTIYGPLKAAYKQECNLFMKNKLGMKITQNHIASLFRKAYQKVATIPKAEAGFAAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -