Spav018491.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383905.1:3294374-3294940[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-12 1.6e-09 37.6 0.0 4 39 17 52 16 57 0.91
Sequence Information
- Coding Sequence
- ATGGCTCGAAAATATAAAAAGAAAATTGAAAAAAAATATGATTTAAACAATTTGGAACGTGCAATAAGAGATGTAAGAAGTAAACAATTAACTATAGGAAAAGCAGCTAAAAATTATTCTATACCAAAGTCAACTATATATGATCATTTAAAAAAAGAAGTTTTAGTTCAGCCCAAAAGTGAAAGAAAATCTGTATTTTCTGAAGCACAAGAAAAAGAATTAGCAGAGCATATTATCAAATGCAGTAAACTATTCTATGGATTGACTGTTGAAGCTGTACGGAAAACTGCTAATAAGTTTGCAGAAAAAAATAAATTAAATCACAAATTTAATAAGAACTCTCAAAAAGACACGAAACCAAAAAAAGACGAAAAAACAAAAAAACAAAACAAAGAAAATAAACAAACTCAAAATGAGTATTATTGTATTTTTTGTGCGGGAAAATATGAAGAACCACCCATTGAAGAATGGATAATGTGCTATGGATGCAATTTATGGGCACATGAAGAATGCAGTGATGGTGAAAGCACAAGCAAAGGGTTCCTCTGTGATTTATGTAGAGATTAA
- Protein Sequence
- MARKYKKKIEKKYDLNNLERAIRDVRSKQLTIGKAAKNYSIPKSTIYDHLKKEVLVQPKSERKSVFSEAQEKELAEHIIKCSKLFYGLTVEAVRKTANKFAEKNKLNHKFNKNSQKDTKPKKDEKTKKQNKENKQTQNEYYCIFCAGKYEEPPIEEWIMCYGCNLWAHEECSDGESTSKGFLCDLCRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317208;
- 90% Identity
- iTF_01317208;
- 80% Identity
- -