Spav008504.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- Tigd4
- Assembly
- GCA_947532125.1
- Location
- OX383908.1:13875909-13878485[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.00038 0.17 11.9 0.0 22 40 30 48 28 53 0.81 2 5 0.0029 1.3 9.1 0.0 23 40 274 291 272 296 0.79 3 5 0.0029 1.3 9.1 0.0 23 40 378 395 376 400 0.79 4 5 2.3 1e+03 -0.2 0.0 10 24 472 485 469 488 0.73 5 5 0.0041 1.8 8.6 0.0 23 37 600 615 598 621 0.76
Sequence Information
- Coding Sequence
- ATGTCGCAAAAGAAAAGAAAACAAATAAGTATCGAAGAAAAATCGCGTATTATATCAAAGTTAGAGAGTGGAACCCCAAACAAAGATTTGGCAAAGAAATATGGTGTACCACACTCGACAATTTCAACCATTTGGAAAGAGAGAGAGAAAATCAAAACACTTTATGACAATAATTGTTTGAAAATGAAACGAGCAAGAACAACGAAACATACGAAGATTGAGGAAGCTCTATTAAAGTGGTTTAAATGTCAAAGGATGAATAATGTGCCAATAAATGGACCAATACTTCAACAAAAAGCAAACGATTTTGCTAGGCGATTCGGCGAAGATTTCGTTTGTTCTTCTAGTTGGATTCAACGTTTCCGGGCTCGgtacggtatcgtcggaggaaaaatgagtggtgaagctgtcagtcttgatgatggtgttgtagaaggatggatatcgcggaaggggcctacattatgcgaaggtgatggaacagatgccatatttaatgcaaatgaaaccggacttttttataatatgacaccagacaggactttaaagtttaaagaagaaaactgcgctggtgaaaaaatgtctaagacgagaccaacaaccatggttgcagcaaatatgacagggtccagtaaaaggaagctttctgttgttggaaagtctaagaaaccaagatgctttaaaaatatacactatctaccaccacctgtaacttatgaagataatttgaatcatgaaAAGAAAAGAAAACAAATTAATATCGAAGTAAAATCACGTATTATATCAAAGTTAGAGAGTGGAACCCCAAACAAAGATTTGGCAATGGAATATGGTGTACCACACTCGACAATTTCAACCATTTGGAAAGAGAGAGAGAAAATCAAAACACTTTATGACAATAATTGTTTGAAAATGAAACGAGCAAGAACAACGAAACATAAGAAGATTGAGGAAGCTCCATTAAAGTGGTTTAAATGTCAAAGGATGAATAATGTGCCAATAAATGGACCTATACTTCAACAAAAAGCAAAAGATTTTGCTAGGCGATTCAGCGAAGATTTCGTTTGTTCTTCTAGTTGGATTCAACGTTTCCGGGCTCGgcacgAGAGTGGAACCCCAAACAAAGATTTGGCAATGGAATATGGTGTACCACACTCGACAATTTCAACCATTTGGAAAGAGAGAGAGAAAATCAAAACACTTTATGACAATAATTGTTTGAAAAGGATAAGAGTAAGAACTATGAAGCATAGGAAGATTGAGGAGGCTCTATTAAAGTGGTTTAAATGTCAAAGGAAAAATAATGAGCCAATAAATGGACCAATTCTTCAACAAAAAGCAAACGATTTTGCTAGGCGATTTGGTGAAGATTTTGTTTGCTCTTCTAGTTGGATTAATCGTTTCCGGGCTCGGCACAGTATCGTCAGAGAAAAAATGAGTGTTGAAGCTGCCAGTCTCCATGATAGCGTTGTAGAAGATTGGATATCGCAAAAGAGGCCTACATTATGCGAAGGTTATGGACCAGAAtttaaagaagaaaactgctctggtgaaaaattgtctaagaagagattaacaatcatagtggcagcaaatatgacaggatccagaaaaaggaagcttttagttgttgaaaaatctaagaaaccaagatgctttaaaaacataccctctctaccaccacctgtaacttatggaaacaatgtgaatcatgaaAAGAAAAGAAAACAAATTACTATCGAAGAAAAATCGCGTATTATATCAAAGTTAGAGAGTGGAACACCAAACAAAGATTTGGCTATGGAATATGGTGTACCACACTCGACAATTTCAACCATTTGGAAAAAGAGAGAGAAAATCAAAACACTTTATGACAAAAATTGTTTGAAAATGAAACGAGCAAGAACAACAAAGCATACGAAGATCGAGGAAGCTCTATTAAAGTGGTTTAAATATCAAAGCGCAAATAATGTGCCAATAAATGGACCAATTCTTCAACAAAAAGCAAAAGATTTTGCTAGGCAATTCGGTGATGATTTTGTTTGCTCTTCTAGTTGGATTCAACGTTTCCGAGCTCGgcacggtattgtcagaggagaaatgagtggtgaagctgccagtgtcgatgaaggtgttgtagaagaaaatacaaaggcctaa
- Protein Sequence
- MSQKKRKQISIEEKSRIISKLESGTPNKDLAKKYGVPHSTISTIWKEREKIKTLYDNNCLKMKRARTTKHTKIEEALLKWFKCQRMNNVPINGPILQQKANDFARRFGEDFVCSSSWIQRFRARYGIVGGKMSGEAVSLDDGVVEGWISRKGPTLCEGDGTDAIFNANETGLFYNMTPDRTLKFKEENCAGEKMSKTRPTTMVAANMTGSSKRKLSVVGKSKKPRCFKNIHYLPPPVTYEDNLNHEKKRKQINIEVKSRIISKLESGTPNKDLAMEYGVPHSTISTIWKEREKIKTLYDNNCLKMKRARTTKHKKIEEAPLKWFKCQRMNNVPINGPILQQKAKDFARRFSEDFVCSSSWIQRFRARHESGTPNKDLAMEYGVPHSTISTIWKEREKIKTLYDNNCLKRIRVRTMKHRKIEEALLKWFKCQRKNNEPINGPILQQKANDFARRFGEDFVCSSSWINRFRARHSIVREKMSVEAASLHDSVVEDWISQKRPTLCEGYGPEFKEENCSGEKLSKKRLTIIVAANMTGSRKRKLLVVEKSKKPRCFKNIPSLPPPVTYGNNVNHEKKRKQITIEEKSRIISKLESGTPNKDLAMEYGVPHSTISTIWKKREKIKTLYDKNCLKMKRARTTKHTKIEEALLKWFKYQSANNVPINGPILQQKAKDFARQFGDDFVCSSSWIQRFRARHGIVRGEMSGEAASVDEGVVEENTKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -