Sjap028063.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- nfxl1
- Assembly
- GCA_033032175.1
- Location
- CM065326.1:978789-981266[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 4.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 0.01 2.3e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 18 3.1e-07 0.0067 17.6 15.9 3 19 186 202 185 202 0.95 4 18 1.1e-07 0.0024 19.1 11.1 3 19 239 255 237 255 0.91 5 18 0.45 9.8e+03 -2.1 1.1 6 10 280 284 279 284 0.87 6 18 7.6e-10 1.6e-05 26.0 11.7 1 19 290 308 290 308 0.99 7 18 1.6e-06 0.035 15.4 18.3 3 19 345 361 344 361 0.93 8 18 4.1e-07 0.0089 17.3 17.0 1 18 395 412 395 413 0.97 9 18 8.1e-09 0.00017 22.7 16.9 1 19 422 440 422 440 0.99 10 18 0.54 1.2e+04 -2.3 1.0 5 10 468 473 468 473 0.91 11 18 0.00011 2.3 9.5 5.4 9 19 488 498 486 498 0.90 12 18 0.0021 45 5.4 8.6 1 12 508 518 508 518 0.96 13 18 0.31 6.7e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 18 1.7e-05 0.36 12.1 5.2 1 11 588 598 588 599 0.98 15 18 0.51 1.1e+04 -2.2 1.4 14 18 612 616 612 617 0.84 16 18 3.5e-05 0.76 11.1 14.4 4 18 630 645 628 646 0.89 17 18 2 4.3e+04 -6.1 2.9 9 13 652 656 652 656 0.74 18 18 2.1e-06 0.045 15.0 11.3 1 16 687 701 687 706 0.87
Sequence Information
- Coding Sequence
- ATGGCACGAAGATATAGAGACGCAGCGGCAAAATTGCATCAAAATGTTCAAAAACACTTGAAAGACATGAAAGAACTCTCATCATCAGAAGATGAAGAACCTTACGAGTCAAATGTTCTGGACGGTGTGTTTCAAAGCTATCGGCGAGGCGGCGGCGACTCGCAGTTATTAAACAGAACTAAGAATCTTCTGGAAGAAGCTATTAGTGGCCGGTCTGTGACCTGTCTAATATGCATAGGTTCTGTCAAAAGAGTAGATGCTATATGGAGCTGTGATTATTGTTACTGCTTCTTCCACTTATCCTGCATACAGAAGTGGTCAAGTGACAGCATCAGCCTCCGTAGTGAGGAAAATCAGGGCCCTATTACTGTGTTTGTACATAAGAAAATCGAGTGGTGTTGTCCTAAATGCCGCCATTCATATTCCAAGGATGAAATACCAAGAAAATATCGCTGTTTTTGCAGTAAGTCTGATGATCCTCCATTGCATCCGTGGTTGTTACCACACACTTGTGGAGAGGTTTGCGGAAAGAGGTTATCGACTGGCGataattgtaaacataaatGTCTCCTCTTGTGTCACCCTGGTCCATGTCCACCATGTCCCCAGACTGTTAATGGAGTATGTTATTGTGGTAAAGAACATAAACGAGTGAGATGTAGTGCTGCAACATGGTCCTGTAATCAACAGTGCAAGAAAATCTTACATTGCCGAacacataaatgtgaaaatatttgCCATGATGGTGAATGTCTACCTTGTACTTATACCAGTATGCAGGTTTGTCAATGTGGCTCTGAAAAAGCCAAGAGACCTTGTAATAATCCTATCTGGCATTGTCAAAAAccatgcaataaaaaatattcatgtgGCTTTCATAATTGCGAGAAAGTTTGCCATTCTGGTGATTGTGGGTCTTGTCCCAACTCTGGCACGAAATCTTGCCCCTGTGGTGCTAATAAACGTTTTGTACAATGCCCTGATGTAATGGAGACTTGTCTAGGAAcatgtaataaaaaacattatgacTGTGAACACAGTTGCCCTGAAAAATGCCATAAAGGTCCTTGTCCACCTTGTCAAGTATTAATCCAAAAGACTTGCCAATGCTCTACACATACTAGATCTCTTCCATGCAGCAAAGATTTCAGATGCGAGACAAAATGCAGAGGTACAAGGCCATGTGGTAAACACAGCTGTGCTCGCAAATGCTGCAATGGAAACTGTCCTCCATGTGAAAAAATCTGTGATAAGCCCCTTCACTGTGGTCGCCATAAATGCACTAACATCTGTCATCATGGTCCATGTTACCCATGCCCATTGGAATCAAAAATCACCTGCAGATGTAAAGAAACATACATCACTGTTCCCTGTGGAAGAGAGAGGTTTGTAAAGCCTCCAAAATGCTCTCGGCCTTGTAAAATTAGATACAAATGTGGTCATAGTGAGGAAAATATTCATTCATGCCATTTTGGAGATTGCCCACCTTGTAAAGCAATATGCTATAAAACTTACCCAAAATGTGGACATGAATGTAAGGCTACATGTCATGAATTTGTTGCTGTTGTATTCAAACAAGTCGAAAAACCAGCAACACCTTGGGAAGTGCAACCTCCGAAGACTAAAATAATGACTTTAGATTGTCCGCCATGTGAAACACCTGTCTCTGTCGTCTGTTTTGGAGAACATGAAACAGAATATCAGGCATGTCACTCAGCCAGGCGTAGATCATGTGGTAGAGAATGTGGCAGACAGTTACAATGTGGTAATCATGTTTGTTCTCAACTTTGTCATCTCTTGAAAGAAGACTCTGATTACCCGAGTGTGCCTTTTGAATGTAAACCATGTAACAAAGCGTGTTTAGTATCCCGTCCAGAAAAATGTGttcataaatgtaaaatacaagCATGTCATCCTGGACCATGTCCACCATGTGATATATTAGAACGGATTTTATGTCACTGTGGTGTCACAGAACTATATATACGCTGCAAAGAATTACCAACAGTGACTGAAGAAATATTGTCATGCAATCAACAGTGTCCAAGGAGCTTAGAATGTGGTCATCGTTGCCGAAATACTTGTCACTCGGGGCCATGTGTCAATCAAGTTTGTTCTAGGaagacaaaaatatattgtCCTTGTGGAAATCTGAAAAAGGAAGCAGCCTGTAACTCTATTAGGAATGCAGAAATAACAGTAATTTGTAATGAAAGTTGTGAAGCAAAGAAATTAGCCATTAAATTGGAAAAGGAGAAAGAAGAAAGTCGTAGGAAAGAGatggaagaagaaaaaaatcgtAGGGAGCTTGCCGAGTATGAATGGAAATTGAGTGGGAAAAAGAAgagatataaagaaaaaaaggttataGTCAATAAAGACGAACGAAAATGGCTAAAGCTATTTTTGATTcctattttatctatattaattgtaattgtagcatctatttattatatattttgtgtgAATATCTGA
- Protein Sequence
- MARRYRDAAAKLHQNVQKHLKDMKELSSSEDEEPYESNVLDGVFQSYRRGGGDSQLLNRTKNLLEEAISGRSVTCLICIGSVKRVDAIWSCDYCYCFFHLSCIQKWSSDSISLRSEENQGPITVFVHKKIEWCCPKCRHSYSKDEIPRKYRCFCSKSDDPPLHPWLLPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCGKEHKRVRCSAATWSCNQQCKKILHCRTHKCENICHDGECLPCTYTSMQVCQCGSEKAKRPCNNPIWHCQKPCNKKYSCGFHNCEKVCHSGDCGSCPNSGTKSCPCGANKRFVQCPDVMETCLGTCNKKHYDCEHSCPEKCHKGPCPPCQVLIQKTCQCSTHTRSLPCSKDFRCETKCRGTRPCGKHSCARKCCNGNCPPCEKICDKPLHCGRHKCTNICHHGPCYPCPLESKITCRCKETYITVPCGRERFVKPPKCSRPCKIRYKCGHSEENIHSCHFGDCPPCKAICYKTYPKCGHECKATCHEFVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVSVVCFGEHETEYQACHSARRRSCGRECGRQLQCGNHVCSQLCHLLKEDSDYPSVPFECKPCNKACLVSRPEKCVHKCKIQACHPGPCPPCDILERILCHCGVTELYIRCKELPTVTEEILSCNQQCPRSLECGHRCRNTCHSGPCVNQVCSRKTKIYCPCGNLKKEAACNSIRNAEITVICNESCEAKKLAIKLEKEKEESRRKEMEEEKNRRELAEYEWKLSGKKKRYKEKKVIVNKDERKWLKLFLIPILSILIVIVASIYYIFCVNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00113830; iTF_01317903; iTF_00114612; iTF_00113024; iTF_00187727;
- 90% Identity
- iTF_00113024;
- 80% Identity
- -