Basic Information

Insect: Saturnia japonica
Gene Symbol: -
Assembly: GCA_033032175.1
Location: CM065321.1:841448-850984[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0053 0.58 11.9 0.6 1 23 105 127 105 127 0.98

2 11 0.036 4 9.3 0.1 2 23 135 156 134 156 0.95

3 11 1.5 1.7e+02 4.2 2.4 1 23 160 182 160 182 0.96

4 11 0.36 39 6.2 3.1 1 23 187 210 187 210 0.96

5 11 0.00043 0.047 15.4 0.4 1 23 214 237 214 237 0.95

6 11 0.00069 0.075 14.7 0.5 2 21 257 276 256 281 0.91

7 11 0.00046 0.05 15.3 0.2 3 23 289 309 287 309 0.95

8 11 0.00043 0.047 15.4 0.4 1 23 381 403 381 403 0.98

9 11 1.8e-07 2e-05 26.0 1.4 1 23 409 431 409 431 0.99

10 11 1.4e-05 0.0015 20.0 1.5 1 23 437 459 437 459 0.98

11 11 1.1e-05 0.0012 20.4 2.9 1 23 465 488 465 488 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0053	0.58	11.9	0.6	1	23	105	127	105	127	0.98
2	11	0.036	4	9.3	0.1	2	23	135	156	134	156	0.95
3	11	1.5	1.7e+02	4.2	2.4	1	23	160	182	160	182	0.96
4	11	0.36	39	6.2	3.1	1	23	187	210	187	210	0.96
5	11	0.00043	0.047	15.4	0.4	1	23	214	237	214	237	0.95
6	11	0.00069	0.075	14.7	0.5	2	21	257	276	256	281	0.91
7	11	0.00046	0.05	15.3	0.2	3	23	289	309	287	309	0.95
8	11	0.00043	0.047	15.4	0.4	1	23	381	403	381	403	0.98
9	11	1.8e-07	2e-05	26.0	1.4	1	23	409	431	409	431	0.99
10	11	1.4e-05	0.0015	20.0	1.5	1	23	437	459	437	459	0.98
11	11	1.1e-05	0.0012	20.4	2.9	1	23	465	488	465	488	0.97

Sequence Information

Coding Sequence: ATGAAGGTTGAAGATGGAGTGATGGAGTGTTGTGTGTCCGCTGCCAAAGTCTATGATGATGATAAACCTTTGAGTCAAGTGTTTATTGATAAATGcgacataaaaaagaaaaagaaaggaAAAGATGACAGAAGAAAACATAAAGAGAAGAATTTATTGAGTAAGCTAAAAATCGTTGATAAAGGAAAAGGAATGTCAAAGAGTGTTGATAATGAAGCGTTGAAGGATTTTATTATCAGTCAACTAACAcTTCCAGAGCAGTTAGCTGAAGTGGAAAAGAGGAAGAATTCACCAAACTACAAGGACTCACCGTACCGTTGTGATATTTGTTATAAGGGATTCCTACAAGTAGATACTCTAAACAATCACACAATTCGACATGAGCTGATTTCTGGTGATATAGAGTGCGGTGTGTGTAAATTTCGTTTTGTCTCTCGTCGTGCGTACGCACTGCATGTCGCCAGACATACAAGGAAATTTTCCTGTACCAGATGTAGCTTTGTCACTGTACATATTGATCAAGCAAAGAAACACAAGCAATGGCATGACGGAGTTACATACAAGTGTCAGTATTGCAATGAAGTATCCAATAAACTGACGTCACATCTCAGCCACATTCGCATGAAGCACACGTCTGAGTTCGTTTGCGACGTCTGTGGGTACTCGTTCGTGAGCGACAAGGGTCTCAAGATGCATAAAACAAGAATGCACAAGCAATGCAAAGATAGAGACGGGAATCCGAAGGCGGGTGTCGATGAATCAAGTCTGTATTGCAAGGAGTGCGACTTGCAGTTCACGACGAGGGAGGCGTGGAAACGGCATCAGGTCACCTCGGCCAAACATAGAGATAAGATTGGTACCGCATGCCGGGCGTGCGGTGAGACGTTTTCAAGTGCGGGTCGCTTGCGGTCGCACGCCCGCACGCACGCGACTGCCGCGACCGCACTAGCGCGGGCGCTGGTCGCACGACGTCGGTATATACCGCGCGACCGACGACCACGGAACCTACGGAACACGCTTGGACTCTCCTACCCTACGACATGCGAACACTGTTCAGAAACAATAGCGGACAGAAGTCGACACTGGAAACACTATCAGCGATGTCACCAAGACAAGAAGTATCCTTTGTCAGAGAATAATTACATTTGCGAATATTGCGGGAAAGGATTCCAGGCAAACGCATTCCTAGTCTACCATAAGCGGACTCACTTCGAGGAACGCACGTATAAGTGCCCGGTTTGCCCGAAGTCGTTTCACACAGCGAGCACTCTACGCGCGCACCGGCTCACTCACTCTGTGGTGCGGCCCTACCCGTGTAGTCTGTGCTACAAGACATTCAAAACTAAGCTAGGCCTTCAGCAacatataaaaAGTCATTCAGGGCGTCGTCCGTTTTCTTGTCAATACTGTGGCAAATCATTTTCTCGTGGCTCGTGTCTGACCCTGCATGTTAATAGACTACATACCAGACAGACTGAAACGGATAAAGATTTATCTAACtga
Protein Sequence: MKVEDGVMECCVSAAKVYDDDKPLSQVFIDKCDIKKKKKGKDDRRKHKEKNLLSKLKIVDKGKGMSKSVDNEALKDFIISQLTLPEQLAEVEKRKNSPNYKDSPYRCDICYKGFLQVDTLNNHTIRHELISGDIECGVCKFRFVSRRAYALHVARHTRKFSCTRCSFVTVHIDQAKKHKQWHDGVTYKCQYCNEVSNKLTSHLSHIRMKHTSEFVCDVCGYSFVSDKGLKMHKTRMHKQCKDRDGNPKAGVDESSLYCKECDLQFTTREAWKRHQVTSAKHRDKIGTACRACGETFSSAGRLRSHARTHATAATALARALVARRRYIPRDRRPRNLRNTLGLSYPTTCEHCSETIADRSRHWKHYQRCHQDKKYPLSENNYICEYCGKGFQANAFLVYHKRTHFEERTYKCPVCPKSFHTASTLRAHRLTHSVVRPYPCSLCYKTFKTKLGLQQHIKSHSGRRPFSCQYCGKSFSRGSCLTLHVNRLHTRQTETDKDLSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -