Sjap031670.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- Zfy2
- Assembly
- GCA_033032175.1
- Location
- CM065329.1:9794648-9799449[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.44 49 5.9 2.4 2 23 135 156 134 156 0.92 2 15 6.8 7.4e+02 2.1 0.1 5 19 178 191 177 191 0.78 3 15 2.3 2.5e+02 3.6 0.3 10 23 232 246 230 246 0.91 4 15 0.0014 0.15 13.7 0.8 1 23 268 291 268 291 0.98 5 15 0.00011 0.013 17.2 0.5 6 23 302 320 300 320 0.95 6 15 0.00022 0.024 16.3 1.5 2 23 333 355 332 355 0.97 7 15 0.00012 0.013 17.1 0.6 6 23 366 384 364 384 0.95 8 15 0.0004 0.043 15.5 2.6 2 23 397 419 396 419 0.96 9 15 0.0021 0.23 13.2 0.9 6 23 430 448 428 448 0.94 10 15 0.0012 0.14 13.9 0.6 1 23 470 493 470 493 0.98 11 15 0.00011 0.012 17.2 1.7 6 23 504 522 502 522 0.95 12 15 0.00018 0.019 16.6 3.6 2 23 535 557 534 557 0.96 13 15 7.3e-05 0.008 17.8 0.9 6 23 568 586 566 586 0.95 14 15 0.0002 0.021 16.4 3.6 2 23 599 621 598 621 0.96 15 15 0.00088 0.097 14.4 2.9 6 23 632 650 630 650 0.95
Sequence Information
- Coding Sequence
- ATGAAAGACGAGATTGAAACAAATATAACTATGAATAGCAAGGAACATCTAGCACCCAGCACCAGCTGTGATACATTGAGTACCACAGGTCCAGAGGCACAGTGGAATCTAAGGATGTGTATGCCTATATTGAAACAAGAAACAGTAGAGTGCATAAATGAAGAAGTATCACCTTGCAGTGAGGATatgaataAGGAGTTTTTAGAACTCATAGACAAACAAGAAGTAGATCATGAAAACACAGAGGAGGAATtgtcattaattataaatgaagaaAATGAGAATGGAAACTACCAGTTTATAGTAAAAATGGAGAAGCCAGAAGAGgatcaatatttatttgataatgccGGAGGCACAAGCGTACATCATTATGATGTCCTAATGAATCCTCAAGAGGTTGAATGCAAGTTGTGCTGTAGAACATTCAAAAATGGttTCAATTTACTGAGGCACAATATTGAGCACATAAAAGTTGAAATAAACACATCGGATGATAATAGTAAAGTGATGGAGTTACACCAGCGCCAATATTGCGACGAAAGTTTTAACCATGATAATATGCTTGCACACGACGGTGATGTTCACACCAAGAAAATAGATAAGGGAGAATTACGCGGAAAGAATTTCAAGAGCGCACCGAACCTTAAGCGTAGTGAAATGCTTTTACACAAACAAATGTCTCCAAACCAATTCCGTACACCGATGAACTTACGTAATCATGAGAAATGGCGGCATGACGGCAGcattaatgatataaataatgaCAAAGTTACTGTTAAGCAGGTagagaaaatgaaatataaatgtgaCTCATGTGAAGGAACTTATGGAAGTAAATATAGTTTAACGCAGCATATTAAGTCGATGCATTATGATTACGGAAGAACGTTtgattgttggtgcgggaaacagttccgtacacCGATACAATTACGTGCTCATATGAGGCAGCAACATGATGGCAAAATAAAAGATAGAAATAACGAAAAAGTTCAATGTGACACTTGCCAAAGAAAATTCAAAagcaaatactttttattaatgcATATAAAAAGTGTTCATTATGATTTTGGTAAAGTatttgaatgttggtgcggTAAACAGTTCCGTACACCGATGAACTTACGTGCTCATATGAGTCGGCtgcataataacaaaataaatgatacAAATAACGAGAAAGTTCAATGTGACACTTGCCAAAGAAAATTCAAAAGCAAACACTTTTTATTAGcgcatataaaaaatgttcattatgattatggtaaagtatttgaatgttggtgcgggaaacagttccgtacgCCGTTAAACTTACGTAATCATTATAAATGGCGGCATGACGGCAACATTAATGATACAAATAATGACAAACTTACTGGTAAGCAGGTagatgaattaaaatataaatgtgactcATGTGAAGGTACTTATGGAAGTAAATATAGTTTAACGCAGCATATTAAGGTGATGCATTATGATTACGGGAGAACGTTTGATTGtcggtgcgggaaacagttccgtacacCGGCATACTTACGTAAGCATATGAGGCAGCGGCATGATGGCAAAATGAATGATACAAATAGAGACAAAATTCAATGTGACACTTGCCAAAGGAAATTTAAAAGCAAAGACTGTTTATTaaagcatataaaaaatattcattatgattatggtaaagtatttgattgttggtgcgggaaacagttccgaaCACCGAGAAACTTACGTGCTCATATGAGTCGGCAGCATGATAGCAAaataaaagatagaaaaaacGACAAAGTTCAGTGTGACACTTGCCAAAGAAAATTCAAAAGCAAAGACTGTTTATTaaagcatataaaaaatattcattatgattatggtaaagtatttgaatgttggtgcgggaaacagttccgtacgCCGAAATATTTAAGTCATCATATGAGGCAGCGGCACGATGGCAAAATGAAAGATAGAAATAAAGACAAAGTTCAATGCAAGGCCCGATGTAGTCCAGAGAAGCTTAAATTAAATGCGGCAAATTGA
- Protein Sequence
- MKDEIETNITMNSKEHLAPSTSCDTLSTTGPEAQWNLRMCMPILKQETVECINEEVSPCSEDMNKEFLELIDKQEVDHENTEEELSLIINEENENGNYQFIVKMEKPEEDQYLFDNAGGTSVHHYDVLMNPQEVECKLCCRTFKNGFNLLRHNIEHIKVEINTSDDNSKVMELHQRQYCDESFNHDNMLAHDGDVHTKKIDKGELRGKNFKSAPNLKRSEMLLHKQMSPNQFRTPMNLRNHEKWRHDGSINDINNDKVTVKQVEKMKYKCDSCEGTYGSKYSLTQHIKSMHYDYGRTFDCWCGKQFRTPIQLRAHMRQQHDGKIKDRNNEKVQCDTCQRKFKSKYFLLMHIKSVHYDFGKVFECWCGKQFRTPMNLRAHMSRLHNNKINDTNNEKVQCDTCQRKFKSKHFLLAHIKNVHYDYGKVFECWCGKQFRTPLNLRNHYKWRHDGNINDTNNDKLTGKQVDELKYKCDSCEGTYGSKYSLTQHIKVMHYDYGRTFDCRCGKQFRTPAYLRKHMRQRHDGKMNDTNRDKIQCDTCQRKFKSKDCLLKHIKNIHYDYGKVFDCWCGKQFRTPRNLRAHMSRQHDSKIKDRKNDKVQCDTCQRKFKSKDCLLKHIKNIHYDYGKVFECWCGKQFRTPKYLSHHMRQRHDGKMKDRNKDKVQCKARCSPEKLKLNAAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -