Sjap005200.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- -
- Assembly
- GCA_033032175.1
- Location
- CM065307.1:3396806-3410933[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.084 9.2 8.2 3.3 1 23 582 604 582 604 0.94 2 28 0.0013 0.14 13.8 0.5 2 22 632 652 631 652 0.93 3 28 0.0012 0.13 14.0 0.3 2 23 681 703 680 703 0.96 4 28 0.61 66 5.5 2.2 2 21 753 772 752 774 0.92 5 28 0.0041 0.45 12.3 0.4 1 23 791 813 791 813 0.95 6 28 4.1e-05 0.0044 18.6 1.3 2 23 848 869 847 869 0.97 7 28 0.00049 0.053 15.2 2.0 2 23 905 927 905 927 0.97 8 28 0.0002 0.022 16.4 1.9 1 23 977 1000 977 1000 0.96 9 28 0.00072 0.078 14.7 0.1 1 23 1064 1086 1064 1086 0.97 10 28 0.0098 1.1 11.1 6.2 2 23 1098 1119 1097 1119 0.96 11 28 0.068 7.5 8.4 1.9 2 23 1131 1152 1130 1152 0.96 12 28 0.0095 1 11.1 1.1 1 23 1162 1184 1162 1184 0.98 13 28 0.0025 0.27 13.0 4.2 1 23 1212 1234 1212 1234 0.96 14 28 0.00032 0.035 15.8 1.7 1 23 1245 1267 1245 1267 0.98 15 28 0.0009 0.098 14.4 2.9 1 23 1275 1297 1275 1297 0.98 16 28 0.00037 0.04 15.6 0.2 2 23 1317 1339 1316 1339 0.97 17 28 2.2 2.4e+02 3.7 0.5 1 23 1357 1379 1357 1379 0.91 18 28 0.15 16 7.4 3.7 1 23 1386 1408 1386 1408 0.97 19 28 0.0046 0.51 12.1 2.5 2 23 1419 1441 1418 1441 0.95 20 28 0.004 0.43 12.3 0.4 2 23 1464 1485 1463 1485 0.95 21 28 0.0015 0.16 13.7 0.4 2 23 1566 1587 1565 1587 0.95 22 28 0.38 42 6.1 1.8 5 23 1597 1615 1594 1615 0.93 23 28 0.006 0.65 11.8 0.9 2 23 1626 1648 1625 1648 0.95 24 28 0.25 27 6.7 1.8 2 23 1665 1683 1665 1683 0.88 25 28 0.6 66 5.5 1.1 2 20 1687 1705 1686 1707 0.92 26 28 0.26 28 6.6 0.5 2 23 1756 1777 1755 1777 0.93 27 28 0.013 1.4 10.7 0.5 2 23 1788 1810 1787 1810 0.94 28 28 2.6 2.8e+02 3.5 2.7 2 19 1848 1865 1847 1868 0.92
Sequence Information
- Coding Sequence
- ATGCGCTGTTGGATGGCAGTGTTCTACACAATACAGGAGGCGGAGCTGAGAGGTATTGACCTCCCTGTGGAATACAGGGAGACAGTGTGGAAAGCGGCTACAGGAAAACTCGCATACCCGGAGAGTCTCGTTTACAGAGAGCCGGGCTGTAGGCGATGTGTGGGCGTTGAGGAGGAGGGGATGGAGCAATTTGGCAGGCCCCCTACCCCCCCACCTTCCCCTGCAGCCGCGGGAAAAGATGTACCTGTCACTGATGAATACCTACTAGCCCAGGTAGGTCAAGATTTCGACATGTCTGACTCAGAGATGTCTAGAGATGGAGAATCTGAGAAACCGGGGCGCACCGCACCTCCCGCGCAGCGCCGCCCACCGGTCCAAGAGAAGATAAGCCAACCGATAGAACAGCGGTCTTACGCACAGATAGCCGGTAAGCTCGTAGAGCCACTGAAAGCGAGCATTAGTGCGGATAACGCACGACAGCCGCCAGCCAAGAAAGCCGCTCATAGCAGAATACCACCATTGATTGTGGATAAGATGCCGCGTTGGAGCTTCCATAAGGAGGAGCTAACGCGCATCCTAAACAGAATATCTAACGCGCGCCCCAGCGGGATGGGAGTGCACTTTTTACCGCTCGACGAGGAGGAATACCGTACGATTCAGGACTACCTATTACAGCAAGAGGAATGCAAGTCGTTCTCGTACTCGCTCCCTGAGGAGAAGTACCTAAAAATAGCAATTAGAGGGCTCCCAGCGGACACTAACACAGATGACGTAGCTGCCGCCTTACAGAGAAAGGGACACAAAGCTGAGTACGTGAAGTGTATCCGGGTGCGAGATGGGCGCCCCGGCTGCATCTATCACGCAGCAATAAAGAAAACCAGAGACACCGCCCCAGCAATATACAGCATCGACGAGTTGATGCACGGCTCTCAGAAGTGCCACAAGGACATCGCCTGCGTCCGGTGCGGGGGCCCGCACTACGCGCGGGACTGCGGGCGATCTATAGAAGAACCCCCAACCTGCGCCAACTGCGGCGGTGAGCATCCCGCCAACTACACGCGGTGCCCAGCGTACAGCGTAGAGTTACGCAATAAGCGGGCAGGCGCAGTGTCGAGGACGGTAAAGAGAAGGCCAGAATATAGTGGGCGAACACTGCCACTGCTTACCACCGTGGAAGAGGTGGCTTCGTCGTCGCTGAAGGCGCCGGCCAACGACCCGGTGGAGCGCGGAGGCAGGGTGAGGCCCGCTCGCAGACGACTTGTATATGAAGGTGATGGACTACCTGATAAGGTTTGCTCAGAATGTATACAGAAACTAAGTAGCGCGTACATATTTAAGCAACAGTGCGAGAGAGCCGATCAAGAGTTAAGACGGAACTATGTCCCACCTCCAGGTTTCAGTATCAGTCCACCTCCACCTAACCGCCAGAGTAGCGATTCCGCCTTCTCCAATCACACCGACAGCTCTAATTTGACAAAGACTCCATCAACCGAAGGCAAGGATACATCAGTACGAAGCACTCGTAAACGTAGCATTGAAAGCGATAACGCCTCCGTAAGCAGTCGAAACAATTATCCCCCTAGTACTTCTAAGCGTATTGAAGAACTTAAAAGATCTAGCAAAAGACCTCGCTTTCAATCTGGGAACACGTCTCAACAAGATTCTGATTATGACGACGTCGGATCGAATTACTTACCGGAAAGCGCAGGAACGGACTCGGATGaaccaatattaaaaaatgtattcaaatgtaataaatgtCCCAAGCAATTCCAGTCTGTTCAAAGTTTGAGTGCTCACTGCAAAGTCCATAAAAGGAACAGCTTGGGGAAAAATGCAGTAGTAAACATCCCGATTCCTAATGATGACTCTACAGATGCAGAGGATAAAGTTAGTTGTGAAAGATGTGATAAAAcgtttaaattgaaaataatgctAAAACGCCATCAGGAGACATGCGGAAATACTCCCCAAGTATCACCAAAAAAAGAACTGCAAGTTTCGTTGAAACCAATCGACGTTGCTAATGCCGTGAAAATCGAATGCGAGATTTGTTCGACCAAATTCAAAGCTGTCGAATATCTCAAGAAACATATGAGATTGGTTCACGCGGCTGTGCCTAAAAGAAGTTTGGGTGAGGATGGAAAAAGTTTGGTGCCTGTTCCGTGCCTCTACTGCCTCGAGCCATTTAAAGATTTTTACTTGCATAATGCTCATTTCTCATCTTGCTCGAAGAAAGACCATAGCCAAGCTCTCGAGTGTCCATTGTGCCATAAGGTGGCGACTAAGAGAAGTGCGTATATTCTTCATACAAAGTGTCACTTCATGATGCGTGGTAATGTTGAAGAGGCTGAAGTCGAGGAGGAAGTGCACGAGTGTCGGATTTGCGGAAAAAAATTGGATTCACAGGAAAAACTCATCACACACCTGGCTGCACATGTCTCCAATATTGATGATAGTTTAGATGAAGACGAGTCCAGAGATAGTCCAGTAGAGGAGACGTTAACTAATACGTCAAGTCAGAGCACAGTCGGTAACTTGAAATGTGACATCTGCGATAAACAATTCACATACAAGAAAGCCCTACTGACCCATCAGCTAAAACATACAGAAACCGATGTGAAAATGGAGCCACCAGACAAGGACTCTAGTTTACCCAATGAGACTTACAAGGAGTCCGATTCTGAATCGAGTGTCGAAGGTGACGATAACACTTGTGACATATGCGAAAAGCAGTTCTCGTATAAACGTCTATTGGTGCAACACAAGCGGACCAAGCATACAATGGTCGCCGGCTTTAAGCGCTCGAAGATAACCCTGAAAGACTGCCCCGTGAGGTGTTTGATATGCGATCTGGAGATGAAAGTGAGCAATATAAACGAGCACAACCAGAAACACATAGCGTTGAACATGAAGCCGAGGAATATTTACACGTGTAAAGAGTGCGGCAATAACTTCAAGAGCTGCAGCGCTTTAGCGAATCACATAAAGTTTGTTCACAGGTTAAAACAGCAAGTACCAAATGAGACGAAGATGAAAGAATTCAGTACACCGGACTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCGCTGGATTGGATCCAGAGTCACAACGACTTTGGTGAGGTTCCGATTGACGATCATAATGGAGAGAGCAAACCAGTGGTCGATATGGCCGGGTTCACTTGTCCCATTTGCGGAAAGAAGATGCCAACGCTTATATCGCTGAAGCGGCACGTGAATTGGCATTCGAACGTTGGGAATAATATCCAGAAGGTGATCGAATGTTTCGTTTGCAAGGAgACGTTTAGATTTCAATGCCATTTCAAAATTCACATGCGTCAACACTACCAAGATAAGAATCTCGACCCGAAGCTTCTCACTTGCTCAATCTGCAACCGGAAGAGTAAGCATTTGCGCGCCGCCAGGGCGCACATGAACTACCACAAGCAGACGCGTTTCCAGAACAAGGATTACCAGTGCTCAATATGCAAACGGGTCTTCCAGTTCAGAAAAGTGTATCTATCACATATGGCTATCCATTATAAGAGGGGGGACAGCATCCAGAACACCGTAGTAGGCTGCGTCGGTGATAATGTTGAAAATAACGTCAACGATGGTACACACACGTGTAACATTTGTGGTAAAGTGTGCGATTCTGAAAACTCTTTAAAACACCATACAATATGGCACAAATCTAAAACGTCCCTATATGGTGCCAGACACGAGTGTGACATCTGCAACCTCCAGTTCACGAGTAAAAAATGGTTAGACGTCCACACGAGGACGCACTACGAAGACGATAACGGTCCATTCAAATGCAACATTTGCGGCAAAGGGTTTACATCTGAGGAGTATCATCGCAGGCATGTTAAATCTCACAATTTTGACCATGAATCTCACAAAAAACGCATCGAGAGACTCAGAAAAGATAAAGTTAAGTGTCCAATATGCAATCGATATTATCCTGACCTTGTGAAACTTATTCGACATCTCAGAAGGACTCATCCGGAAAGTAAAATGATCAAAGAGGACCCGGACGCGCCCGTACAGAAATACTATGCTTGCAAGTTATGCGCGAAAGTGTTTTTGGATGAGAGACGACTCCAACATCATGAGGAAGCCCACCTCAGGAAGCCAGAATTCTTCAAATGCAAGTTCTGCGGCAAGAAAACGATTTCATTGAAGAACCATAGAGTTCATATTAAAGGACATTTGACAACAAAACACACAGACAATCCGCTGAAATGTCCACACTGTGAAGAGGTGTTTGTTAAAGGTTACGATTTGCATCACCACTTACGTGATGTGCATGATATTAATGAGACTTGGATAGCAGAGCGCACCGAACAAGTCCTCAATGGACCTCTGAAAGACCTGCAGTGCTCTGTCTGCTTCAAAATCTTGGCAAGTAAGGGCAACTTTCAGCGTCATATTGACTATCACAATTCTCTAAGATGCAACTACTGCTTCGATTACTTTAGTGCTTTGAGATTTTTGGAAGGGCATTTGGGGTTCGCTTGTGAAAAGAAACAGTTAATAGGAAACACTGAAATATATCCAAAGAAACTGAAATGCCACATTTGCTACAAAGCTTTCCATCTGCAAGTCAAGTTAGACTGTCACCTACGAACTCAGCATGACATAAAAGTGCTCCGGGAAGCATCGTCCGAGAAAAAGGAAAGTGTCTGCGATTATTGTTTCAAAGTGTTTGAAAACGAATACGCACTGACCACGCATAAGATATACCATAGAACCATTGGATACTATGGATGCATTTATTGTAAAAGGAAATTCAATACTTTGACACTgtatagaaaacataaaaacgCGCACTTTTCACAACTAAACGTTGACGATCCCTGGAAATGCGAGCATTGCGATGAGACGTTTGTCGCTTTTAGACAATTTATATATCACATGCGGGACGTCCACGGCGATGACAAAGAATGGTTGGTCATGCCAAAAGATTCCATTGAAGAAACATGTCCTATATGCAATAAAGTGTTCATGAATTTACACAGACATTTAGACTATCATGAGGAAAATAAATGTAAGAAGTGCGGCGAATATTTTTACTCCACCGTCGAGTACGATAACCATCTATGCGCTATTGAGAGTGACGATGAAGTGACCGTGAATTGTGATAACGATAAGGTACAAAAATACGGGGAATGTCCGTTTTGCTTCAAGCCTATAACGAAGAAGAATTCCAGACGTCTGCATGACCAAATACACAAGGGCTCAGGATCGATATCCTGTCGGTTCTGTCcacttaaatttaaaactatggACGCATTCAATATACACGCTTTCTCACACCGAAGTAGAAAGTACAACAAGAGACCGATAAAATGTAGAAATTGCCCCGAGAAGTTTGTACAGTACGGGCCATTTATGAGACATATGAAATTTGTCCACAAATCTGTGAAGAAAGTTCACTACAGAGCGACGGTGAAGCCTGAGAAGTGTCTGGTGTGCGGTGGTGAATTCCCTAACCTTCACAACCACTACCGAGCACACTTACTTAATCAGTGCCAACTCTGCCGAAAATATTTCACATCTTACCAACTGTTTTCGAACCACGAGTGCGATAAGGAAGATTCTGATCCCACCAAAGTGTTCATTAGTGATGCAAATCTCATTTTCCTCATAAACAGTTACGTACCTAAGGACGAAAAAGACGATGAGAAATTCTATGGCTACAGCGATGAAGAAGATGAGGAGATTGCGCCTACCCCCAGTGTCCAGTCGCAACCGGAGGAGAATCCTGATAAGAAACCTCTTCACAATCTAGTTCAATCTCCGATTATATCCGACGTATTGTCGTTATTTCACAAAGAGGAAGTGAAGAGTCAAGACGAAGACTGTATCAGTCAAGACGGTGATTGTAATAGCCAGAATACTGATGTTGATGTCGTAAATCTAAGTGACGACTCAATGGATATTAATGAAGAAATCCCCATAGTTGTGATCGATGACGATTAG
- Protein Sequence
- MRCWMAVFYTIQEAELRGIDLPVEYRETVWKAATGKLAYPESLVYREPGCRRCVGVEEEGMEQFGRPPTPPPSPAAAGKDVPVTDEYLLAQVGQDFDMSDSEMSRDGESEKPGRTAPPAQRRPPVQEKISQPIEQRSYAQIAGKLVEPLKASISADNARQPPAKKAAHSRIPPLIVDKMPRWSFHKEELTRILNRISNARPSGMGVHFLPLDEEEYRTIQDYLLQQEECKSFSYSLPEEKYLKIAIRGLPADTNTDDVAAALQRKGHKAEYVKCIRVRDGRPGCIYHAAIKKTRDTAPAIYSIDELMHGSQKCHKDIACVRCGGPHYARDCGRSIEEPPTCANCGGEHPANYTRCPAYSVELRNKRAGAVSRTVKRRPEYSGRTLPLLTTVEEVASSSLKAPANDPVERGGRVRPARRRLVYEGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKTPSTEGKDTSVRSTRKRSIESDNASVSSRNNYPPSTSKRIEELKRSSKRPRFQSGNTSQQDSDYDDVGSNYLPESAGTDSDEPILKNVFKCNKCPKQFQSVQSLSAHCKVHKRNSLGKNAVVNIPIPNDDSTDAEDKVSCERCDKTFKLKIMLKRHQETCGNTPQVSPKKELQVSLKPIDVANAVKIECEICSTKFKAVEYLKKHMRLVHAAVPKRSLGEDGKSLVPVPCLYCLEPFKDFYLHNAHFSSCSKKDHSQALECPLCHKVATKRSAYILHTKCHFMMRGNVEEAEVEEEVHECRICGKKLDSQEKLITHLAAHVSNIDDSLDEDESRDSPVEETLTNTSSQSTVGNLKCDICDKQFTYKKALLTHQLKHTETDVKMEPPDKDSSLPNETYKESDSESSVEGDDNTCDICEKQFSYKRLLVQHKRTKHTMVAGFKRSKITLKDCPVRCLICDLEMKVSNINEHNQKHIALNMKPRNIYTCKECGNNFKSCSALANHIKFVHRLKQQVPNETKMKEFSTPDLADFCEVVVTKAEPLDWIQSHNDFGEVPIDDHNGESKPVVDMAGFTCPICGKKMPTLISLKRHVNWHSNVGNNIQKVIECFVCKETFRFQCHFKIHMRQHYQDKNLDPKLLTCSICNRKSKHLRAARAHMNYHKQTRFQNKDYQCSICKRVFQFRKVYLSHMAIHYKRGDSIQNTVVGCVGDNVENNVNDGTHTCNICGKVCDSENSLKHHTIWHKSKTSLYGARHECDICNLQFTSKKWLDVHTRTHYEDDNGPFKCNICGKGFTSEEYHRRHVKSHNFDHESHKKRIERLRKDKVKCPICNRYYPDLVKLIRHLRRTHPESKMIKEDPDAPVQKYYACKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTTKHTDNPLKCPHCEEVFVKGYDLHHHLRDVHDINETWIAERTEQVLNGPLKDLQCSVCFKILASKGNFQRHIDYHNSLRCNYCFDYFSALRFLEGHLGFACEKKQLIGNTEIYPKKLKCHICYKAFHLQVKLDCHLRTQHDIKVLREASSEKKESVCDYCFKVFENEYALTTHKIYHRTIGYYGCIYCKRKFNTLTLYRKHKNAHFSQLNVDDPWKCEHCDETFVAFRQFIYHMRDVHGDDKEWLVMPKDSIEETCPICNKVFMNLHRHLDYHEENKCKKCGEYFYSTVEYDNHLCAIESDDEVTVNCDNDKVQKYGECPFCFKPITKKNSRRLHDQIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKRPIKCRNCPEKFVQYGPFMRHMKFVHKSVKKVHYRATVKPEKCLVCGGEFPNLHNHYRAHLLNQCQLCRKYFTSYQLFSNHECDKEDSDPTKVFISDANLIFLINSYVPKDEKDDEKFYGYSDEEDEEIAPTPSVQSQPEENPDKKPLHNLVQSPIISDVLSLFHKEEVKSQDEDCISQDGDCNSQNTDVDVVNLSDDSMDINEEIPIVVIDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -