Sjap018995.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- ZNF212
- Assembly
- GCA_033032175.1
- Location
- CM065317.1:19626031-19627398[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.2e-06 0.00046 21.7 4.2 1 23 143 165 143 165 0.98 2 11 1.2e-06 0.00014 23.4 2.8 1 23 171 194 171 194 0.96 3 11 5e-06 0.00054 21.5 1.3 1 23 202 224 202 224 0.98 4 11 1.1e-07 1.2e-05 26.6 1.2 1 23 230 252 230 252 0.98 5 11 2.7e-06 0.0003 22.3 4.0 1 23 258 280 258 280 0.97 6 11 3.8e-07 4.1e-05 25.0 0.3 1 23 286 308 286 308 0.98 7 11 2.3e-06 0.00025 22.5 1.7 1 23 314 337 314 337 0.97 8 11 0.82 90 5.0 0.3 2 16 343 354 342 361 0.65 9 11 0.12 13 7.6 0.5 2 23 368 390 367 390 0.95 10 11 8.5 9.3e+02 1.8 0.1 1 23 396 421 396 421 0.87 11 11 0.00067 0.074 14.8 0.6 1 23 427 450 427 450 0.91
Sequence Information
- Coding Sequence
- ATGAATCTCGATTTGTGTAGATTATGTTATAAAACAGGCGCTACATCGTACATTTTTCATGGTAATTCTGACGATATTCAACTAAGCACGACAATAATGTATTGCTGttctaatttacaaataaaagaaGGTGACGGCTTTCCTGCTCATGTTTGTGAATACTGCGAGCAAGAATTGCTGAATTGTTACCAATTTATACTTAAATGCGAAGATACCGACAAGAAACTACGATCAAATGTTATATCAGAAGGCATCGCGACTCTCCCCGATTGCCCAACGAAAATGGAAGTAAAGTCTGACCTAGATGAAAATCTATACGATGATTTAAACGAAACtgacagttttaatttaaagtctGAGGTGTTTGAAGAAGTTCCCACAAAAAGAAGATATAAGAAAAGATTGAAGCATAAACATTCTAGTCATCACCAGTGTCATGATTGCGATCGAAAATGCCCTACACGTTCAGCATTAATTATTCACATGAGAGTCCACACAAATGAAAAGCCATTTTCATGTTCATTTTGTGACAAGAGATACAAGGATCGCAGTAATTTAAAAAGGCATATTGACAGAAATCATCAGCCGGAGAGAGAAAGAAACTTCATTTGTGAACATTGTGGCAAAGGATTTTTCAGTAAACGAGATGTAGTTATTCATATGAGAACACATACAGGTGAAACTCCATATGCGTGCAATATTTGTTCTAAAAGTTTCTCCCAGTCTAGCAGTTTATTGAGGCACCAATTACGTCATAGAGGTGAAAGGTCTCACTCTTGCTCAACATGTGATAAAGCATTTTGTACCAAAGAAGAATTACGAAATCATATGTTAGTTCACACCACTGAGAAGAAATACTCATGCCCTATCTGTAATATACCATTTAAATATCAAAGTAATGTAAACAAGCACTTAAGAGTGCATAGAGAACCAAATCGGTTTGTCTGTAATCATTGCGGCCgtaaatttaacttaaaagGTAATCTTAAGATACATATAGACACTCAACATTCAGAAAAGTCTGGATATTGCAATATTTGTTTGAAAAGTTTCCCAAACTTTGAGGTACATATGTGGAGACATACAGGCCACAGACCGTTGAAATGTGAGCTGTGTTCAAGCAGCTTTTTTGAGTTGAAAGCTTTGGGTCGGCACATTAATTATAAGCACAAGCAGACTGAAAAATATAAGTGCTCCATTGATGGTTGTTTGTTAGGCTTTCCATCACGACCAATGCTAGAGTTCCACACCGCTAAAGTTCACAGTATGGACATTCCATTCCCATGTGACAGATGTTCCCGAGGGTTTTACAGAAAGAATGATCTTGCTAGACATAAGATTGGTACTCATAAAGAAAGATTGCTGTAA
- Protein Sequence
- MNLDLCRLCYKTGATSYIFHGNSDDIQLSTTIMYCCSNLQIKEGDGFPAHVCEYCEQELLNCYQFILKCEDTDKKLRSNVISEGIATLPDCPTKMEVKSDLDENLYDDLNETDSFNLKSEVFEEVPTKRRYKKRLKHKHSSHHQCHDCDRKCPTRSALIIHMRVHTNEKPFSCSFCDKRYKDRSNLKRHIDRNHQPERERNFICEHCGKGFFSKRDVVIHMRTHTGETPYACNICSKSFSQSSSLLRHQLRHRGERSHSCSTCDKAFCTKEELRNHMLVHTTEKKYSCPICNIPFKYQSNVNKHLRVHREPNRFVCNHCGRKFNLKGNLKIHIDTQHSEKSGYCNICLKSFPNFEVHMWRHTGHRPLKCELCSSSFFELKALGRHINYKHKQTEKYKCSIDGCLLGFPSRPMLEFHTAKVHSMDIPFPCDRCSRGFYRKNDLARHKIGTHKERLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114295;
- 90% Identity
- iTF_01317534;
- 80% Identity
- -