Basic Information

Insect: Saturnia japonica
Gene Symbol: -
Assembly: GCA_033032175.1
Location: CM065329.1:2849525-2863033[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.57 63 5.5 1.2 1 23 16 39 16 39 0.93

2 25 2.1 2.3e+02 3.8 0.2 3 23 62 82 60 82 0.94

3 25 0.19 21 7.0 6.7 1 23 104 126 104 126 0.95

4 25 0.00012 0.013 17.1 1.1 1 23 130 152 130 152 0.98

5 25 0.025 2.7 9.8 0.3 1 23 157 180 157 180 0.94

6 25 9.1e-05 0.01 17.5 2.5 1 23 186 209 186 209 0.98

7 25 0.038 4.2 9.2 1.3 1 23 216 239 216 239 0.95

8 25 0.0083 0.91 11.3 2.2 1 23 245 267 245 267 0.96

9 25 2.5e-06 0.00027 22.4 0.6 1 23 273 295 273 295 0.99

10 25 0.086 9.4 8.1 0.5 1 23 359 382 359 382 0.89

11 25 0.0011 0.12 14.1 0.0 2 23 411 433 410 433 0.91

12 25 0.00037 0.041 15.6 1.0 1 23 455 477 455 477 0.98

13 25 0.0033 0.36 12.6 0.1 1 23 481 503 481 503 0.95

14 25 0.0011 0.12 14.0 0.7 1 23 508 531 508 531 0.96

15 25 0.0064 0.7 11.7 5.6 1 23 537 560 537 560 0.96

16 25 0.00039 0.043 15.5 0.1 1 23 567 590 567 590 0.98

17 25 0.25 27 6.7 0.3 1 23 711 734 711 734 0.95

18 25 3.1 3.4e+02 3.2 0.2 2 23 759 781 758 781 0.92

19 25 0.081 8.8 8.2 0.1 1 23 805 827 805 827 0.96

20 25 0.00048 0.052 15.2 0.2 1 23 831 853 831 853 0.98

21 25 0.00043 0.047 15.4 0.3 1 23 858 881 858 881 0.95

22 25 0.0048 0.53 12.1 0.3 2 23 888 910 888 910 0.93

23 25 0.079 8.7 8.2 6.4 1 23 917 940 917 940 0.96

24 25 4.7e-05 0.0051 18.4 4.8 2 23 947 968 946 968 0.96

25 25 0.0022 0.25 13.1 1.5 1 23 974 996 974 996 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.57	63	5.5	1.2	1	23	16	39	16	39	0.93
2	25	2.1	2.3e+02	3.8	0.2	3	23	62	82	60	82	0.94
3	25	0.19	21	7.0	6.7	1	23	104	126	104	126	0.95
4	25	0.00012	0.013	17.1	1.1	1	23	130	152	130	152	0.98
5	25	0.025	2.7	9.8	0.3	1	23	157	180	157	180	0.94
6	25	9.1e-05	0.01	17.5	2.5	1	23	186	209	186	209	0.98
7	25	0.038	4.2	9.2	1.3	1	23	216	239	216	239	0.95
8	25	0.0083	0.91	11.3	2.2	1	23	245	267	245	267	0.96
9	25	2.5e-06	0.00027	22.4	0.6	1	23	273	295	273	295	0.99
10	25	0.086	9.4	8.1	0.5	1	23	359	382	359	382	0.89
11	25	0.0011	0.12	14.1	0.0	2	23	411	433	410	433	0.91
12	25	0.00037	0.041	15.6	1.0	1	23	455	477	455	477	0.98
13	25	0.0033	0.36	12.6	0.1	1	23	481	503	481	503	0.95
14	25	0.0011	0.12	14.0	0.7	1	23	508	531	508	531	0.96
15	25	0.0064	0.7	11.7	5.6	1	23	537	560	537	560	0.96
16	25	0.00039	0.043	15.5	0.1	1	23	567	590	567	590	0.98
17	25	0.25	27	6.7	0.3	1	23	711	734	711	734	0.95
18	25	3.1	3.4e+02	3.2	0.2	2	23	759	781	758	781	0.92
19	25	0.081	8.8	8.2	0.1	1	23	805	827	805	827	0.96
20	25	0.00048	0.052	15.2	0.2	1	23	831	853	831	853	0.98
21	25	0.00043	0.047	15.4	0.3	1	23	858	881	858	881	0.95
22	25	0.0048	0.53	12.1	0.3	2	23	888	910	888	910	0.93
23	25	0.079	8.7	8.2	6.4	1	23	917	940	917	940	0.96
24	25	4.7e-05	0.0051	18.4	4.8	2	23	947	968	946	968	0.96
25	25	0.0022	0.25	13.1	1.5	1	23	974	996	974	996	0.98

Sequence Information

Coding Sequence: ATGCAATCTTGTTCCGCCTACCCTTTCAAATATAGGAAGGGCACATATTTATGTTTCTTTTGTAAGAGCAGTTTCATGGAACCGGAAAAACTGCGCGAACACACCCGAGACCAGCATTCCGATTATAGACAAATGAAGCCACGTAAATACGAACCGTTGAAGATGGATTTCGCGATGGTACATTGTAAGCTATGCGGTCTGGACATACCCAATTATTTAACGTTAAAAGTCCATTTAATCGAACATGGTAAAGTGATAGATTCGTCATACGGCGAAAGCGTTTTGCCATACAAACTCAACAAGAACGAACACTGTTGCCAAATATGCGGAAAACGGTACGAGATGTTCCTAAGCCTTCACAAGCATATGAACGATCATTATGAGTATTTTATATGCGAGACGTGCGGTAAACGGTTCGCGACATCCCAAAGAATGGTTAATCATACAAGGACGCACGAGAAAGGCGATTTTCCTTGCAAAAAATGTGCGGAATCTTTCACATCGTATTCCGCGAGGTACGCCCACGTCGCGAAGGTCCATAAATCGAATAAAAGGTACAAATGCCCGATATGCGATGAAAAATTTTCATCCTATAAACACAGGTTGAAGCATCTAAATATGGTACACGGGGAGAAAACTGCCGTATTCCCTTGTCCTTCTTGCCCGAAGGTATTCGACTTGTGCAGCAGAAGAACCGCTCATATTCGGTTCCAGCACTTGCAGGAGAGGAAGCACGTATGCAGCGTTTGTAGTATGAAGTTCTTCACCAACTACGAACTCCAGGAGCATTCGATAAAGCACGGCGGGGAGAGGATTTACCAATGCGATGTATGCAAAAAGGCATACGCTCGGTTAAAAACACTGAGGGAACATATGAGAATTCATAATAACGACAGAAGATTCACCTGTCCGGTTTGTGGTTCATACGTATTACCTGATAAGGAACGATTTCATGACGAAACACAAATAAAGGATCTCAAGACGAGGAACGACGATTTCAAAGCGAAACAGCAGCGCGCTTTGATCCTTCTCGAAAATTCTAGAATATGCCCGTTTAGGTGGATGAAGAATACGTATATTTGCATTTATTGTGAACGATATTTCAATGATCCTGTCGAACTGAGACATCATAATGCATCCGAACACGATAATCTAAAAGAAACAGATATTAAAATTGCTATATCGAAACTGAAGAAATACGAACTGGTCAAAGTTGACGTGACAAACGTTGAATGCGGGATTTGcgataaaagttttaaaatttacgaAGAACTTAAAATCCATCTCGCTGATGAACATAAGAAAAACATCGACCCGAACGCAACAGATGGAGTGCTGCCTTTCAAAATGACGCAATCGCAGTTCAGCTGCGGCATCTGCGACGAAACTTACGAAGAGTTCAAAAGCTTGAACCATCACATGAACGTGCATTTCCAAAACTTTATCTGCGATCAGTGTGGTATTGGATTCATCACGCCAGGAAGGCTGCGAACCCATGCGTTCTCACATGAAACCGGTTGCTACCCTTGCGAGACTTGCGATAAGGCATTCCGGTCTTCAAACGCGAAGAACGAACACCACGCAACCGTGCATATGAAAGTGAAAAGGCACAGATGTCCGCACTGCACGGAATCCTTCAGGAACTACTTCCAAAGGAACAAGCATATCACATCGGTGCACGGTTTGAAGTTGAAGGAGTTCAAATGCGCGATGTGCCCGAAAGTCTTCAATTTGAGCGGAAAATTGGGTGTTCACGTACGGACGGTACATTTGAAAGTGAAAACGGCATTCGTGCGAGGAATCGACTCTTCTATATTACTGGAAACTTCGAAGAAAACCATCGTGCCGTTATTTCAAGTCACATACGATCGGTCACTATGTAGACCTTTGGGAACTGTTTTGGACTTTCGTAAATTAAGAACGAAGTCTTCGGTAGCTTCAAGGATTTCTTCTCCGAGTCGTTCACCTTCCCCTCTACCATTAAGTAGATCACCTACCCCTCCCACCGACAACCCACCAGTTAAAGTCTTCAAATCTAAGTCAACGGCAAAGGCTCCAGACGTGAGGCAGAACGCGCTGCTTATCTTTGAATTTTCGACAGCTTATCCATTTGTATACGGGAATAATAAGTTCAAATGTTTCGTTTGCTCCCAACCTTATCTCGACCTTCAACTCCTAAAGCAGCATATGTCCGAAGCTCATACATTTGCCCCGTTAAAAAGATTAGTCAACAATCGAAGAGAAAACATCTTAAAAGTTGATATCAATGGTATGTCCTGTAAATTATGCTCTATGAAACCAACAGATTTGGTCGAGCTAAAGATTCATTTAAAGGAAGTACACGGGAAACCTATAGATCTCGATTTACACGACAACTTGATACCGTTTAAGCTTGATGCCATCAACGGTTCATACAAATGTGTTATATGCAGCGAAAGCTTCATCAAAGTGAGGATTTTGGTCATTCATATGAGCGTTCACTTTAACAATTACAGTTGCGAAATTTGCGGATCCGGTTTCATGACTTTGAGACTTCTGAAGAAGCATTTGGAAGTTCACGAAAGCGGCAACTACGCGTGCGATCGCTGCGACAAAGTCTTCTCAACTCCTTACAAAAGAACGTTACACGTTCGTGGAGTACATTTGAAGCAATATCCACGCCGTTGTCCGATATGTCCTGAAAGGTTCAACTCGAATTATAAAAGGACGATACATTTGCAAGACGTACATAATCAATCTACGAGGGTTCATAAATGTGAGACTTGCGGACGAGGATTCAATTTGAAGTACCATCTGATATGCCACACTCGTTCGGTCCACCTACAGGAGAGGAACCAACAGTGCGACATTTGCCACCAGAGGTTCTGTAACAAGGAGTCGTTGAAGAGGCATATGGTTATACACACTGGAGAGAAAAATCACAAATGTGATGCGTGCGGTATGGCCTTCCTCCGTCGTAAGAACTTGAAGGATCACTTGAGGTTGCACGAGATTGGTTGA
Protein Sequence: MQSCSAYPFKYRKGTYLCFFCKSSFMEPEKLREHTRDQHSDYRQMKPRKYEPLKMDFAMVHCKLCGLDIPNYLTLKVHLIEHGKVIDSSYGESVLPYKLNKNEHCCQICGKRYEMFLSLHKHMNDHYEYFICETCGKRFATSQRMVNHTRTHEKGDFPCKKCAESFTSYSARYAHVAKVHKSNKRYKCPICDEKFSSYKHRLKHLNMVHGEKTAVFPCPSCPKVFDLCSRRTAHIRFQHLQERKHVCSVCSMKFFTNYELQEHSIKHGGERIYQCDVCKKAYARLKTLREHMRIHNNDRRFTCPVCGSYVLPDKERFHDETQIKDLKTRNDDFKAKQQRALILLENSRICPFRWMKNTYICIYCERYFNDPVELRHHNASEHDNLKETDIKIAISKLKKYELVKVDVTNVECGICDKSFKIYEELKIHLADEHKKNIDPNATDGVLPFKMTQSQFSCGICDETYEEFKSLNHHMNVHFQNFICDQCGIGFITPGRLRTHAFSHETGCYPCETCDKAFRSSNAKNEHHATVHMKVKRHRCPHCTESFRNYFQRNKHITSVHGLKLKEFKCAMCPKVFNLSGKLGVHVRTVHLKVKTAFVRGIDSSILLETSKKTIVPLFQVTYDRSLCRPLGTVLDFRKLRTKSSVASRISSPSRSPSPLPLSRSPTPPTDNPPVKVFKSKSTAKAPDVRQNALLIFEFSTAYPFVYGNNKFKCFVCSQPYLDLQLLKQHMSEAHTFAPLKRLVNNRRENILKVDINGMSCKLCSMKPTDLVELKIHLKEVHGKPIDLDLHDNLIPFKLDAINGSYKCVICSESFIKVRILVIHMSVHFNNYSCEICGSGFMTLRLLKKHLEVHESGNYACDRCDKVFSTPYKRTLHVRGVHLKQYPRRCPICPERFNSNYKRTIHLQDVHNQSTRVHKCETCGRGFNLKYHLICHTRSVHLQERNQQCDICHQRFCNKESLKRHMVIHTGEKNHKCDACGMAFLRRKNLKDHLRLHEIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -