Basic Information

Insect: Saturnia japonica
Gene Symbol: -
Assembly: GCA_033032175.1
Location: CM065317.1:16390115-16403927[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00018 0.019 16.6 1.7 1 23 130 152 130 152 0.98

2 13 0.0029 0.32 12.8 5.4 2 23 158 179 157 180 0.94

3 13 2.4e-06 0.00026 22.5 0.9 1 23 182 204 182 204 0.99

4 13 0.0015 0.17 13.6 1.0 1 23 219 241 219 241 0.99

5 13 2.5e-06 0.00027 22.4 1.1 1 23 251 273 251 273 0.98

6 13 9.6e-08 1e-05 26.9 2.9 1 23 279 301 279 301 0.99

7 13 3.6e-05 0.004 18.7 4.6 1 23 307 329 307 329 0.99

8 13 6e-08 6.5e-06 27.5 0.9 1 23 335 357 335 357 0.95

9 13 1.3e-06 0.00014 23.3 0.7 1 23 363 385 363 385 0.98

10 13 7.8e-05 0.0085 17.7 1.0 1 23 391 413 391 413 0.95

11 13 0.0013 0.14 13.8 6.8 1 23 419 441 419 441 0.98

12 13 1.1e-06 0.00012 23.5 1.3 1 23 447 469 447 469 0.99

13 13 0.00076 0.083 14.6 0.3 1 20 475 494 475 497 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00018	0.019	16.6	1.7	1	23	130	152	130	152	0.98
2	13	0.0029	0.32	12.8	5.4	2	23	158	179	157	180	0.94
3	13	2.4e-06	0.00026	22.5	0.9	1	23	182	204	182	204	0.99
4	13	0.0015	0.17	13.6	1.0	1	23	219	241	219	241	0.99
5	13	2.5e-06	0.00027	22.4	1.1	1	23	251	273	251	273	0.98
6	13	9.6e-08	1e-05	26.9	2.9	1	23	279	301	279	301	0.99
7	13	3.6e-05	0.004	18.7	4.6	1	23	307	329	307	329	0.99
8	13	6e-08	6.5e-06	27.5	0.9	1	23	335	357	335	357	0.95
9	13	1.3e-06	0.00014	23.3	0.7	1	23	363	385	363	385	0.98
10	13	7.8e-05	0.0085	17.7	1.0	1	23	391	413	391	413	0.95
11	13	0.0013	0.14	13.8	6.8	1	23	419	441	419	441	0.98
12	13	1.1e-06	0.00012	23.5	1.3	1	23	447	469	447	469	0.99
13	13	0.00076	0.083	14.6	0.3	1	20	475	494	475	497	0.94

Sequence Information

Coding Sequence: ATGCGTAACATGGCCTCTACTTGTCGTACTTGTATGAAAGATAACGTAACTTtgatagatttatttaaaagtataatgtTTGAAAATGACTGGATACAAATTGTAGATATGCTAAAAATATGCACAACGGCACAgGTTGCAAAAGAAGATGGTCTGCCACATAAACTCTGTGATAACTGTTTAAACACTCTTCAACTGTCCTATACATTCCGAAATCAAACATTGAAAGCGGAACAGGAATTCAAACGGCTCATGTTGCTAGACATCTCAGTGAAAGATGAAAAACTAGATATTGATATGAAAAGTGAAAATATACAGGACTATTTTGAATGCACGggtgattttgattttgaatcatTGCCGCATTGCAAACAAGAGGATTTTGattacaaatgtaataattgcAGCAAACAGTTTAATGAAGAggaaaattttttaaaacatgttatgTCACATAATTGCTCTGCTCTTTCTTGTACAATCTGTAAAAAGACTTTTCATAAGCAGACATCTTTAGATAAGCATATTGGAAAACATCATACATATAAATGCAATATTTGCTCGCTGAATTTCTCTACAAAGTCACTTTTATTAGACCATTTAATGACACATTCTGTTGATAATTTTAAGTCTGAGTATGAAGTGGACGTAAAATTCCAATGTTCCCAGTGTGAAATGTCATTTCTCAAGCCCAGATCCCTAGCCATGCATATGAAAAAACATAACAAGAAAGTTAAAGAGAGAATAAAATTTGTCtgtgatatttgtaataaaaatttttcattgaaaaCTCTTTTGAGGAGGCATTTAAAGATACACAGTGCTGTGAAACCCTACAAATGTACGAAATGCCCTAAGACATACTCAAGACAAGATCAACTGACAAATCATATTAAGAAGCATAATGGTTGTAAGCCATATTCAtgttctttttgtaaaaaaggtttTACACAATTATGTAGCCTGAAGGACCATATACGCACTCACACAGGTGAAACTCCGTTCTTATGTTCGGAGTGTGGGAGGGGCTTCTCGAACAGTTCTAATTTACGTCAACATATGATGCGCCACACTGGAGTCAAACCCTATGCATGTAACATGTGCCCCAAAACATTCGTCACTAAAGGTCAAATGACTTCCCATATGACAACCCACACTGGAGAACATCCCTACAAGTGTGATAAGTGTGGAGCGGAATTCACCAAAGCGAACTCTTTGAAGAAACACTCGTATATACATCTGGGATTGAGGCCGTTCGTCTGCGATAATTGTAACATGCGGTTTACATGCAAAGATCACTTGAAGCGTCATTACCGAATCCACACCGGTGAGAAACCGTATAAATGCAAGGTTTGCGAACGGGCGTTCACACAGAGCAACGACCTGGTGAAGCATACAAGATCCCACTTCGGAAAATACATATACAAATGTACGGTCTGCAACACCGGATTTAGGTTGGCAAGTGAGCTTAAACTACATTACCCTGTACATTTCAACGGAGACCAGAGGAATATTCAAGAGCCAGAAGCTGACGAGAATGAGACTCTTCACGCTAGCGACGACGTGAAAAACGTAAACGATGAAGTGAAAATAGCGAACAGATTCACTATAACGATAAATAATTTGGATGAGAATGGTGCCGTCGGAGAATTTACTGTTAATATAAGCTCTGATGGAAGCTAG
Protein Sequence: MRNMASTCRTCMKDNVTLIDLFKSIMFENDWIQIVDMLKICTTAQVAKEDGLPHKLCDNCLNTLQLSYTFRNQTLKAEQEFKRLMLLDISVKDEKLDIDMKSENIQDYFECTGDFDFESLPHCKQEDFDYKCNNCSKQFNEEENFLKHVMSHNCSALSCTICKKTFHKQTSLDKHIGKHHTYKCNICSLNFSTKSLLLDHLMTHSVDNFKSEYEVDVKFQCSQCEMSFLKPRSLAMHMKKHNKKVKERIKFVCDICNKNFSLKTLLRRHLKIHSAVKPYKCTKCPKTYSRQDQLTNHIKKHNGCKPYSCSFCKKGFTQLCSLKDHIRTHTGETPFLCSECGRGFSNSSNLRQHMMRHTGVKPYACNMCPKTFVTKGQMTSHMTTHTGEHPYKCDKCGAEFTKANSLKKHSYIHLGLRPFVCDNCNMRFTCKDHLKRHYRIHTGEKPYKCKVCERAFTQSNDLVKHTRSHFGKYIYKCTVCNTGFRLASELKLHYPVHFNGDQRNIQEPEADENETLHASDDVKNVNDEVKIANRFTITINNLDENGAVGEFTVNISSDGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01317501;
90% Identity: iTF_01317501;
80% Identity: -