Sjap019925.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- -
- Assembly
- GCA_033032175.1
- Location
- CM065318.1:13302914-13306795[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-07 0.00025 21.9 0.0 17 41 1 25 1 27 0.92 2 2 8.5 4.3e+03 -1.3 0.0 27 44 34 52 33 52 0.90
Sequence Information
- Coding Sequence
- ATGGGTATAAGAGAAGCCTGCCGGATATATGGCGTACCAAAAACAACAGTACACGATCGTATCTCAGGCAAAGTTGCCGATAATAAGAAACCAATAAATGGTGTCCCTGGAGAAACATGGTACCAAGCTTTTTTAAGACGACATCCCGATGTAAGTGTTAAGGAGCCGGAAGGAATAAATAACGCACGAGCAGCAGTAACGGAGAATCGAGTCAGAATGTGGTTTAAGGACCTAAAAGAATATGTCAAATCCATAGACGCGCTTGAAATATTTGATGATCCTACGAGGATATTTAATGGAGACGAGACGGGGTTTTCGCTTTGCCCAAAAAGTGATGGTAAAATATGTCCACCATTGGTCATATTTCCCTATATCAGACCACCCAAAGCCCTCATTGATAGTATGCCTCCGACATGGATTCTTGGACGATCTGAAAGCGGGTGGATGAAGAGTGATCCGGCAAACGTGAGTGTTTTCAGACCGCTGAAACAAGAGTGGAAGAAGACTGTTAAAAACTGGCAAGCTCGTGATGAAAATATGAACCAGACGGTAACAAAAATCAGTTTTTGCAAGATCCTTAACGAGACCCTGACTAATATCGATCTGGAAAATGCCATAGTAAATGGCTTTCGTAAATGTGGACTGTATCCATTAAACGAAGATTCTGTGGACTACACGAAATGCAATATACAGAAAGCCGAATTAAGGATTGAGGCAAATATATTTACTGAGGAAGAAGATTCTGGAGTCATGAATTTCCTTGATCCGGGATCATTTATAtcacttaataatatatctGTTTTGCCAATAGATGAAATTGAAATCTCTCAAGATAATTCAATGCTGGATAATTTTGCAAACAACCAATCTGTCACTTTAACTACAATAGTAGATATTCacaacgaaaataatttttctgatGCCGATCACAATCAACCTCCACCTAAAGATGTTTTAGCAGTACTTAAAGATACTGTCTCTCTAATAACAGCGGAAGATATCCACAATGAGAATGATATCATGAAAGCCAATGATCATCAACCTCCACCTAGGGATGTGTTAGTACCACTTACAGAGAATGTATATTTAGCCACTACAGCATCAGATATTATCCACAATGAGAATGATATCTTTGAAGCCGACGACCATCAAACCTTGCCTACTGACGTTACAGCACCACTTCCAGAGATTATGTCCTTTGACGAAGCCTTTCAAAGGCACCTCCATTTTCCGGAGCAATCTTCAGCACCAAAAGCAAAGAATGGCCCAAAACTGCCGAGTGCAATTTCTTCCAGCGCCTGGAGaggattttatgaaaaaatggaaaaagacaaagaaaataaaataagagtAAGGAGAATCAAACAAGAATTAAAAGCAGATgcaaaagaaaagaaatctaATGAAAAAGATAgcaaaataaaaggaaaaaagaaaataacaatcAAGTCTACGTCAAAGAAGACGCAGAATAAATCTCTCCAACGTAAAGCTTTAAAATGTAGCCAATGTTCCGATGATTTGATCAGTGACGTAGAAGATGACGCTGAAAAAAATATCGGTTGCGACCATTGCGTAAGTGACATTTCTATGGTCGAGAACAGACGGAAAAGGCGGTCGAAAACTGGCTTTAGGTGTCCGAGAACTGAGTTTAATGCACTTTTCGATAAAATCtatgatttttaa
- Protein Sequence
- MGIREACRIYGVPKTTVHDRISGKVADNKKPINGVPGETWYQAFLRRHPDVSVKEPEGINNARAAVTENRVRMWFKDLKEYVKSIDALEIFDDPTRIFNGDETGFSLCPKSDGKICPPLVIFPYIRPPKALIDSMPPTWILGRSESGWMKSDPANVSVFRPLKQEWKKTVKNWQARDENMNQTVTKISFCKILNETLTNIDLENAIVNGFRKCGLYPLNEDSVDYTKCNIQKAELRIEANIFTEEEDSGVMNFLDPGSFISLNNISVLPIDEIEISQDNSMLDNFANNQSVTLTTIVDIHNENNFSDADHNQPPPKDVLAVLKDTVSLITAEDIHNENDIMKANDHQPPPRDVLVPLTENVYLATTASDIIHNENDIFEADDHQTLPTDVTAPLPEIMSFDEAFQRHLHFPEQSSAPKAKNGPKLPSAISSSAWRGFYEKMEKDKENKIRVRRIKQELKADAKEKKSNEKDSKIKGKKKITIKSTSKKTQNKSLQRKALKCSQCSDDLISDVEDDAEKNIGCDHCVSDISMVENRRKRRSKTGFRCPRTEFNALFDKIYDF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -