Sjap024437.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- clz9
- Assembly
- GCA_033032175.1
- Location
- CM065322.1:15135540-15140356[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-08 2.1e-05 25.4 0.0 1 36 53 88 53 91 0.95
Sequence Information
- Coding Sequence
- atgcctATCACAGAAGCAGAACAAAACAGTATTAAAGCAAAGTTTTATGAAATCGCAAAATTTCCTAGAGTTATTGGTGCTATAGATTGTACACATATTAAAATCTTGTCACCTGACAATATGGCCGAAACAGGCCAAAAGAAACGCAAGTGTTATACTGATGATCAGTTGGCTGCAGCCCTCTTACAAATTCGACAAGGTGTGAACATTTACAGAGCTTCAAAACAATATGGTGTGCCAGAGACTACGTTAAGAAACAAACGTGATGAGCTTTATGTCAATGAAAAGTGTGacGGCCATACGTCACATATATCTTTACCGTTAACAACATTTTGTAAGGAAAAAGGGATCGTTCTAGTTGCATTGCTTCCAAATTCAACACACGTCTTGCAACCTCTTGACGTCGCGGTATTTAGACCAGTCAAAGGAACTTGGAGGGACATTGTCCGGGAATTCCGAATTAAGCATAACTATGCAAAGCTTAAGCGCACAGATTTTTCTGCGGAAGTGCAAAAATGCTTTGATAGAAGCTTCAAGCccgaaacaataaaaaacggTTTCAGATGCTGTGGTATTTACCCATTTGATGAGCAAAATATCAACTATGACAAACTTTTATCTAAAGTGAAGAAACGCCAAAACAAAGTATCCGAAGTCAATCAATGCCAAGAGAGCATGTCACATGTTCCAAAGCTCAGCAATGGGCAATTTAAGTTACAATTTGAGAGCCGATTATCACCGGATATACTAAAATCATTCAAAGAAGCAGGTAACCACTGGACAAACGACCCCACTTACGAAAAACTGTTTCTATTCTGGAAGAGCCTTACACCATCAGGAAGCCTTGAAAGTCAAGAAAATACTGCTCTAGAGATTGGACAAACAACCTTTACCAATAACGTTGATGAAGACAATATTTCAAGCGCAGTTTACAATTTTGATGTTAGATATGATGGTATTTTATCGCCATTTAATGAAGAGATTGCTGGAGATGAAGAAATTGCCTCACTAGACTCAACACAAATTTCACTGTCATCAAATGCTATCGTAACATCCGACAAAAACAACATATCAAAAGCGAATATTCTTACATCGACACCTTTGGTTGATTCATCTACATTGATAGAGATCATTGGTCCAAAATTAGTATCAGATGTTACGCCACCAACAAAGGTAAAAATGTTGACTGAAGAAAAAGTGCTCCTACAAAATTGTTCATCGATTCCTGAATTCAGCAAGTGTTCGAGTCCTACTCTGTCAGTATCTGAAAGAGATAACTCTTCTTCCATAAGTGTACACCCAAGAAAATTGCAACAAGATCCCGTGACATATTACAACTGTTCAAAAGAAATAGATAATCTTCGAGAACCTGCAGTAATACCAAGCACAAGCAAAACTATAGTCCCAGTAGCTTATGAAAATATCCCGACCCCGTTCAAGGAAATATCTACGTCTTTCAAGAATGCATTTTTTTCCCCCGAAGACAGAAAATAA
- Protein Sequence
- MPITEAEQNSIKAKFYEIAKFPRVIGAIDCTHIKILSPDNMAETGQKKRKCYTDDQLAAALLQIRQGVNIYRASKQYGVPETTLRNKRDELYVNEKCDGHTSHISLPLTTFCKEKGIVLVALLPNSTHVLQPLDVAVFRPVKGTWRDIVREFRIKHNYAKLKRTDFSAEVQKCFDRSFKPETIKNGFRCCGIYPFDEQNINYDKLLSKVKKRQNKVSEVNQCQESMSHVPKLSNGQFKLQFESRLSPDILKSFKEAGNHWTNDPTYEKLFLFWKSLTPSGSLESQENTALEIGQTTFTNNVDEDNISSAVYNFDVRYDGILSPFNEEIAGDEEIASLDSTQISLSSNAIVTSDKNNISKANILTSTPLVDSSTLIEIIGPKLVSDVTPPTKVKMLTEEKVLLQNCSSIPEFSKCSSPTLSVSERDNSSSISVHPRKLQQDPVTYYNCSKEIDNLREPAVIPSTSKTIVPVAYENIPTPFKEISTSFKNAFFSPEDRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -