Sjap019207.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- clz9
- Assembly
- GCA_033032175.1
- Location
- CM065318.1:2195353-2196522[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-08 1.1e-05 26.3 0.0 1 36 8 43 8 46 0.95
Sequence Information
- Coding Sequence
- ATGAAGTCAAGAAAAAAGTACACGGAAGAGGATCTTCAAAATGCTATTACAGCAATTAGTAATGGCAGTAGTGTTTACAAAGTTTCTCGACAGTACAATATTCCAGAAACGACATTGCGGGACAAacgtgacaaaaaatattgtcgcGATATACCCGGCAGAAAAACGGTACTCTCAAAATCGGAAGAAACGAAAATTGTTGACTGGATCCATTATCTAGGAAAACACGGTTTCCCAGTTTCTAAGGAGCAATTGAAGCAAGGAGTGGCAAAGCTGGTTGAAAATTTAAACCGACCAAACACTTTTAAAGATggcatccctggtaaacattgGCTTACTAATTTCTTATCAAGACACCCAACAGTTGCAAAGAGAGTAGCACAAACTTTGCCAACTCATCGAAACAAAATAACTGAACAAGATGTGCGCAATTGGTTTGGTAGAGTCAAAAGttattttgaaacaaataatttattaagtgtACTTGCAGATGAGTCAAGAGTTTATAACTGCGACGAAACTGCCTTTTTTCTCTGTCCCAAAGAAAAAGACGTCTTAGTAAAAAAAGGTAGCAAGCGTGTGTATAACAGAGTTGCTAACGACGATAAAGAATGCTTAACTGTCTTAGTTAACGTTTCAGCTGGTGGCAAAATTGCTCCACCTATGGTATTATATCCATACAAACGCTTGCCAAAAAACTTGCCTTTGACGGTGCCACCTACTTGGGGTATAGGATGCACAGAATCAGGGTGGATGAATATGGAGGCCTTTTATGAATATGTTGCGAATGTATTTTACAAGTGGTTActagaaaacaaaataacaatgcCAGTCGCCCTATTCATGGATGGCCATACCTCACACATTTCATTGCCATTAAGTCTTTTCTGCAAAGAAAAAGGAATTATACTCATTGCATTATTACCAAATTCGACGCACCTCCTTCAACCACTGGATGTTGGAGTTTTTCGACCTGTTAAGGGTATATGGAAAAACGTTGTTCACGACTTcagagtaaataataattacgccAAACTAAAGCGCACAGATTTCGCCATAGAAGTACAAAAATGTTTCGAAAAAAGCCTTAAAGcagatacaataaaaatagctttcgAAGCGCTGGAATCTTTCCATTTGATGCCAATAATATTGACTTCTCAAAGGTAA
- Protein Sequence
- MKSRKKYTEEDLQNAITAISNGSSVYKVSRQYNIPETTLRDKRDKKYCRDIPGRKTVLSKSEETKIVDWIHYLGKHGFPVSKEQLKQGVAKLVENLNRPNTFKDGIPGKHWLTNFLSRHPTVAKRVAQTLPTHRNKITEQDVRNWFGRVKSYFETNNLLSVLADESRVYNCDETAFFLCPKEKDVLVKKGSKRVYNRVANDDKECLTVLVNVSAGGKIAPPMVLYPYKRLPKNLPLTVPPTWGIGCTESGWMNMEAFYEYVANVFYKWLLENKITMPVALFMDGHTSHISLPLSLFCKEKGIILIALLPNSTHLLQPLDVGVFRPVKGIWKNVVHDFRVNNNYAKLKRTDFAIEVQKCFEKSLKADTIKIAFEALESFHLMPIILTSQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075365;
- 90% Identity
- iTF_00794462;
- 80% Identity
- -