Sjap022265.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- -
- Assembly
- GCA_033032175.1
- Location
- CM065320.1:16639974-16641131[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-09 2.2e-06 28.5 0.0 1 43 15 58 15 60 0.92
Sequence Information
- Coding Sequence
- AtggtgaaaaattataaaagaacaACAAATAGAGGAGATTGGTCAGAAGAGGCCATGAGAAATGCGGTGGACTCTGTGGTACAAGGCAAAATGGATTACTATCTAGCAGCAAAGACCTTTGGTGTCCCCCAAACCACTTTGGAAAGAAAAGTGAAGATGCTTCGTGAAAGCTCTAAGGAAAATGCTTCAGCTACAATGAAAATGAAGGTTCAGTTAGGCCCTAAAGAAACAGTTTTTTCTTATGACGAAGAGAAAGAGTTATGCAATTATATATTAGATATGGAGAGCAGGCTTTACGGGCTAACTACTAAAGATCTTAGAGGCTTAGTCTacgcaattaaaaataataaaccacatccatttaatgatttaaaaaaagaagctgGTAAAGACTGGGTACAAGGTTTTTTAAAGAGGAATCCAGAATTGGATATAAGACAACCTGAAAGCACCTCAGCTGCGCGTGCTTCCGGATTCAACAAAGAGGTGGTTGATAAGTTTTTCACTTTCTTAGGAAATGTTTATGATGAACATCAATTGACACCTGACAGAATCTATAACTGTGACGAAACAGGAATTTCCGTTGTGCCCAAGACGAAGTCAAAAGTAATAGCTAAAAAAGGTCGAAAGCAAGTTGGGGCCATAACTTCTGCAGAAAGAGGTACGACCATCACAGTCGAAATATGTTTCAGTGCCAGTGGCCAATATATGCCCCCCATGATGATATTTCCTAGAAAGAGGATGGATCCGCAGCTAATGCTAAATGCTGCACCTGGAGCTTGGGGAGTTTGCAGTGATTTTGGCTGGATGACAGCAGAATTGTTTCTGGAATGGTTTAAAAAGTTTATCGAGATTAGTGGAGCCACAGTCGAACGACCTGTTCTGTTACTGTTGGATGGTCATAGTACCCACACTCAAAATATTGATCTCATAAATGAAGCTCGATCCCATGGAGTTATCATTTTATGTTTCCCCCCACATACAACTCACCGCCTTCAAGTCGCTGATGTTTCTTACATGAGACCGTTGAGCACATATTATGATCAACAAATAACAGCTTGGCTTCGCAGCATCCAGGAATGGTCGTCACAGTTCGGCAAATTGCTGAAATTTTTTGGAAAGCGTTCATACAGGCGTCTTCTATGTCAACGGCTGTAA
- Protein Sequence
- MVKNYKRTTNRGDWSEEAMRNAVDSVVQGKMDYYLAAKTFGVPQTTLERKVKMLRESSKENASATMKMKVQLGPKETVFSYDEEKELCNYILDMESRLYGLTTKDLRGLVYAIKNNKPHPFNDLKKEAGKDWVQGFLKRNPELDIRQPESTSAARASGFNKEVVDKFFTFLGNVYDEHQLTPDRIYNCDETGISVVPKTKSKVIAKKGRKQVGAITSAERGTTITVEICFSASGQYMPPMMIFPRKRMDPQLMLNAAPGAWGVCSDFGWMTAELFLEWFKKFIEISGATVERPVLLLLDGHSTHTQNIDLINEARSHGVIILCFPPHTTHRLQVADVSYMRPLSTYYDQQITAWLRSIQEWSSQFGKLLKFFGKRSYRRLLCQRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00256807;
- 90% Identity
- iTF_00256807; iTF_00256806; iTF_00255775; iTF_00428045; iTF_00428941;
- 80% Identity
- -