Basic Information

Gene Symbol
Ubp1
Assembly
GCA_033032175.1
Location
CM065331.1:7803140-7818878[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-55 8.9e-52 176.8 0.1 23 200 123 293 112 293 0.92
2 2 1.9e-27 1.6e-23 84.4 0.7 154 221 291 359 291 360 0.95

Sequence Information

Coding Sequence
ATGTTTAAGCAGGAGGCACCGTCTCCGACAGGCACCGTGCTCTCGCCACCTAGAAGACCCTGGCCGCCGTTACGACGGCCTGATGATAAACAGATGACGAGCATGGTCATCGACGGCGGTAACCGTGACGGCATCGAGGACGGCTGCCAGCAGTCTCCCACGCATAACGGTACCATCATGAGTCAACACGGCAGCTCAGAAAGCATGCAGTGTCAGAACACGATGGCGCCCGGTACTATGATGCCTCTCAATGGATACCACTCCCCTAATGGacaagaaaataaaaACGCGGGACTTCTCATGTGCTCGCCAGTTAGTTCACTGGACGGTTTTCTACACTCGCCTGTGCAGCAGCGGTCTGATTTCAGCTTTAAGGATGATACAAGATTCCAGTACGTGTTGGCCGCTGCGACGTCAATAGCTACGAAGCAGAACGAAGAGACACTCACGTATTTGAATCAGGGCCAGCCCTACGAGGTCAAGCTGAAGAAGTTGGGAGACCTTTCGCATTACAAAGGGAAAATACTCAAGagtGTGATCAAAATCTGCTTTCACGAGCGCCGTCTGCAGTATATGGAGAGGGAGCAGATAACACAGTGGCACGCTGAGAGACCTGGCGAGAGGATAATTGAGGTCGATGTGCCCTTATCATATGGGGTGATAAGAGTGGAGCAGCCTTCGACTATGAACGCACTACACGTCTACTGGGACGCTACTAAAGATGTCGGCGTTTACATCAAGTTGAACTGCATATCGACGGAGTTTACCGCGAAGAAGCATGGTGGCGAAAAAGGAGTGCCGTTCCGCATTCAAGTAGAGACGTACCTCGCTAGTGATGAGCACAACCGCCTCCACGCGGCCGCCTGCCAGATCAAGTTGAACTGCATATCGACGGAGTTTACCGCGAAGAAGCATGGTGGCGAAAAAGGAGTGCCGTTCCGCATTCAAGTAGAGACGTACCTCGCTAGTGATGAGCACAACCGCCTCCACGCGGCCGCCTGCCAGATCAAGGTGTTCAAGCTGAAAGGGGCTGACAGAAAACACAAACAAGACCGTGAGAAAGTGATGCGCCGGCCGCGGATTGATCTCGAGAAGTACCAGCCTGGGTGTGAAGCCACTGTGCTCACTACGttgTCGATTGATGCTTTGATGCCTCCACCGTCATTGGTGACGACTTCGCCGCCATATTCGCCTGATATGTGGTAA
Protein Sequence
MFKQEAPSPTGTVLSPPRRPWPPLRRPDDKQMTSMVIDGGNRDGIEDGCQQSPTHNGTIMSQHGSSESMQCQNTMAPGTMMPLNGYHSPNGQENKNAGLLMCSPVSSLDGFLHSPVQQRSDFSFKDDTRFQYVLAAATSIATKQNEETLTYLNQGQPYEVKLKKLGDLSHYKGKILKSVIKICFHERRLQYMEREQITQWHAERPGERIIEVDVPLSYGVIRVEQPSTMNALHVYWDATKDVGVYIKLNCISTEFTAKKHGGEKGVPFRIQVETYLASDEHNRLHAAACQIKLNCISTEFTAKKHGGEKGVPFRIQVETYLASDEHNRLHAAACQIKVFKLKGADRKHKQDREKVMRRPRIDLEKYQPGCEATVLTTLSIDALMPPPSLVTTSPPYSPDMW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-