Ssub012594.2
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- Gata4
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000117.1:135834-140192[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5 2.8e+04 -4.3 1.7 1 5 491 495 491 496 0.78 2 2 2.1e-18 9.2e-15 54.9 7.4 1 35 543 576 543 577 0.97
Sequence Information
- Coding Sequence
- ATGGAACCACAAacgcaacagcaacagcaacagcagcaacaacaacagcaggaacaattacagcaacaacatcaacgataccaacagcaacaacagcagcaacatcaaGTGCAACAACAATCGCCTGAAAAGTATCACACACATCTACTGGATAAAATCAAAACGGAAAATAATGGTGCTGAGCATTTAAATCATGCAAATAGTGGTACGGTAATAGAGAAGCAGCCACAAGTggagcaacagcagcaacaacaacagcaacagcaacctCAACAATTAACcactcaacaacaacagcaacatcatcagCAATTACCACCAACATCTCAACAACAAAACTCTGTTACGACCATCATACAAACTCAACAATCCCAACCCATTAATGCGGTAATACAAACCCAAAATAGTCAACAGCAACAgtcacaacaacagcaacaacaacaacaacaacagcaacagcaacatccaAGTCACGAAGAATATGTACCCATACAAAGGACGCAACAACGCCGATTTATAACCACAACAGGAGAATTTTGCAGAGTTCATCGTGATTCCGAGGAACCCGAAACGATTAGTGAATATCAACGTCAACGTCATTCACCTGCAGAGTATGTACAAATGGCTCCCCGCAACGAGGAACAACCACCACCGCCACCAACGGGTGCTGCTGTCTATGCGTATGCCAACGAAAATTGCCAACCTATTATATGTACAGCAGATGCCACCGGTGGAACTATTAAACTGGAGTCTATTGATAAAGATCAGGTATCGAATGAAGCCACTCAacagctgcaacaacaacagcagcagcagcaacaacaacaacaacaacaacaccagcagcATCAACACCAATGTCCTACGCCCAATGGCAACTACAATGAATCAATGGTGGTATCTACTTCGGCCTTACATCATCAAAATCCTCACAATCTTAGCAGTACAGGACATGCGCCCTTACCACATCCCACTCACTTGTTAAGATTCGAGGATGATAATCGTTTCGCTCAAACAATTAACGATAATGGCAATGGACCAGCAACTTTGTTCTATGAAGCGGCTGTAGTTGATCCCAATACCCACCCCAATGAAAGCAAAACATTTACCGATTTGGGTAATGCCCattatttgaattattcatCGACCTCCTCTTACCAGTTGAGTCAAAATAACACCATTTATAGTGTTTCACCCGCTTCCAATCAGCTGATATCGAAAAACGATCCCAGTTTAAATTTGCTGAGACAGCCGGTCCAATATCAGTCAATGGCCTTATTTGATTCGGTTAATGCACCCGTTTCAGATCAAAGTATATGGCCTACACCTGGTGTGGAATATTCCAATATGAGCTTTAATTATCATCAGCAGGTGGTCGAGGAATATCCTTCGGGCAATATAACAACCAGTTCTTGGGCCCCCACAAACTCTATAGCCCACTACGAGGCTCCTCCACCTTTGTCGGACAAATGCGAACAATGCAATTCTCCACTGAGTAGTAAGATTAATGGATTTTGTCCCACCTGTTACGGTGGACCCATACGTCAGACTGTAAGAGTAGGACCACGTCAGGCAAAGCCTAAAACATCGGCTGCAGCAGCCAATAATAGAAGGACTGGTGTATCTTGTGCCAATTGTCAAACGACTTCAACGACCTTATGGCGTCGCAACAATGACGGTAACCCAGTTTGTAATGCCTGTGGTCTCTATTTTAAGCTTCACAATACGAATCGTCCGCTGTCGATGAAAAAGGAAGGCATACAAaaacgtaaacgtaaacccAAAAATAATGGCGGCCCTGTCATGAGACCTCAATTACCCAGCTTGCCTCCAGGTGGTGGTAATTTAATGATTTCTACAAATGGGCCCCTATATCCCTCACAAGTTCAAACTATTGGCCTGCCTTTAAATGCTCAGTCATCGCCGAATCCAGCTGATTTGCAAGATATGACGACTGGCGGAACACGTTCGGTTACGATTGGCCATCCCGAAATGACTTTAAATATGTCACGTCCTCACGTAACTTCGGACAGTCATTCTCCTTATAGTAATTCACCATCACAGAGTCAATCGCCTCATTTACCCAGTACAGCGACTTTCAAAGTGCCACCAATTGAAGCGCCAAGGACAACACAGACCAGTGAAATACCCACCAGTGTTATAACACGTACAGGACTACCGGAACGTACatcgaataattaa
- Protein Sequence
- MEPQTQQQQQQQQQQQQEQLQQQHQRYQQQQQQQHQVQQQSPEKYHTHLLDKIKTENNGAEHLNHANSGTVIEKQPQVEQQQQQQQQQQPQQLTTQQQQQHHQQLPPTSQQQNSVTTIIQTQQSQPINAVIQTQNSQQQQSQQQQQQQQQQQQQHPSHEEYVPIQRTQQRRFITTTGEFCRVHRDSEEPETISEYQRQRHSPAEYVQMAPRNEEQPPPPPTGAAVYAYANENCQPIICTADATGGTIKLESIDKDQVSNEATQQLQQQQQQQQQQQQQQHQQHQHQCPTPNGNYNESMVVSTSALHHQNPHNLSSTGHAPLPHPTHLLRFEDDNRFAQTINDNGNGPATLFYEAAVVDPNTHPNESKTFTDLGNAHYLNYSSTSSYQLSQNNTIYSVSPASNQLISKNDPSLNLLRQPVQYQSMALFDSVNAPVSDQSIWPTPGVEYSNMSFNYHQQVVEEYPSGNITTSSWAPTNSIAHYEAPPPLSDKCEQCNSPLSSKINGFCPTCYGGPIRQTVRVGPRQAKPKTSAAAANNRRTGVSCANCQTTSTTLWRRNNDGNPVCNACGLYFKLHNTNRPLSMKKEGIQKRKRKPKNNGGPVMRPQLPSLPPGGGNLMISTNGPLYPSQVQTIGLPLNAQSSPNPADLQDMTTGGTRSVTIGHPEMTLNMSRPHVTSDSHSPYSNSPSQSQSPHLPSTATFKVPPIEAPRTTQTSEIPTSVITRTGLPERTSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313420;
- 90% Identity
- iTF_01313420;
- 80% Identity
- -