Ssub021596.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sarcophaga subvicina
Gene Symbol
ct
Assembly
GCA_936440885.2
Location
CAKZFJ020000272.1:960250-963616[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-32 4.6e-28 98.0 0.0 3 77 343 418 341 420 0.96
2 2 4.3e-31 4.9e-27 94.7 0.0 3 76 597 671 595 674 0.96

Sequence Information

Coding Sequence
ATGTCTGATGAACGTcttgctcatattttaaatgaggCATCGTCACTCATGAAATCATCAGGACCATCTGGTTTGCATGAACATCATCATCAGCGTAGAGCGTCTACCATACCAGAGGATTCGCGCAGCAATGATGACTCCAAGTCGCCGCATCAGCCATGCTCATCGCCCTTCTTTAAGGAGCATAACAGTAAGTCCATGGGTGAAACTGTCATGCCAGGACAGTCTCATTTACGTCCGGACGATATGAATCCCGAGAAAATGGCCCGTTTATATCAGGAATTAATGGCACGCGCCCCACGAGAAGCTTTCCCCGGTTTTTTGCTTTCGCCCTTTTTCAGTGGTGGCCTGCCTTCGGCAGCAGCGGCAGCTAGCATGGGTGGTAATGCCTTTCCCGCTTTGGCAGCCGATGAGAATATGCGTTTGGCTTTTGAGCGTGAAATGTccaaaattcaacaacaacaacaacagcagcagcagcaacaacagcatgcTGTCTCTCAACCTCCCAGCTTTGCCAATTTCTCTAGTCTTATGGCTTTGCAGCAGCAAATGTTGAACGGCGCCCAAGATCTTTCTCTAGGCACGGAGGACAAACCGAAAGACTCTTCGAAAGTGAATGGTCAACGCAGCTCCTTTGAAATTACCTCCGGCAACTCACTCAGCAATCACGGGCAAACAACACCGAACAATAAAGATTCTTCCTCGGCATCTGAGGTGGAGAGACTTTATCCTGGCATGATGAAATCAGAACAAGGCAATAAAACCCCTGCACCCTTGCCCTCTAGCAACAATTCGACCACCAACACTAATTCAGCTGCTCCCAGTCCTCTCAGCAATTCCATACTCCCGCCTGCTATGACGCCCAATGAGGAGTTCTCTGCCACCGCCAGCCCTCTTCAAAGAATGGCCTCCATAACCAATTCGTTGATAACACAGCCACCCGTACCGCCTCATCATAATCCTCCACAAAGGCCTACTAAAGCCGTCTTGCCACCCATAACCCAGCAGCAGTTCGATATGTTCAATAATCTCAACACTGAGGACATTGTGCGGCGCGTCAAAGAGGCTCTTTCGCAATATTCCATATCGCAACGTTTGTTTGGCGAATCTGTGTTGGGTTTGTCTCAAGGATCGGTATCAGACCTCTTGGCCAGACCCAAACCCTGGCATATGCTAACCCAAAAGGGCCGAGAACCCTTTATACGcatgaaaatgtttttggaagACGAGAATGCTGTCCATAAGCTGGTGGCTTCTCAATATAAAATTGCTCCTGAGAAACTGATGAgaactggtaactacagtggtTCTCCCCAAATTCCTCAGGGTTTGGCCAGTAAAATGCAGGCCTCTTTGCCTATGCAAAAGATGATGAGCGAATTGAAGCTGCAGGAACCGGCTCACATCATGCAACAAATGCAGGCAGCTGCTGTTATGTCAGCGGCCatgcaacaacatcaacagcaacaagcTGCCGCTGCCCAACAGAGCCAACAACAGGCTGCCCAGGCGGCTGTACAAGCAGCCCAAGCCGCTGCTGCAGCACAAGCTGCCCAACAGCATCACCAGAGCATGCTGTTGACATCACCAGGTCTGCCGCCACAACACGCTATAGCCTTGCCAGCAGCTAATTCACAGCCTTCATCGGGCAGTACCACACCAGCCGGTCCCACACCCGATAAAAAGCCCATGATGATGCCAATACACTCACCCCACCAAGCCAATGCCATGCGCAATATGCACCAACACATGTCGCCCACCGTTTACGAAATGGCAGCTTTAACACAAGATTTAGACACTCAGGTTATAACCACCAAAATCAAGGAGGCCTTGTTAACCAACAACATAGGCCAGAAGATATTTGGCGAAGCTGTTTTGGGTCTGTCCCAAGGCTCTGTATCAGAGTTGCTGAGCAAGCCCAAGCCCTGGCATATGCTGTCCATTAAGGGCCGCGAACCATTTATACGCATGCAGCTGTGGCTGTCCGATGCCAACAATGTGGAGCGTTTACAGGTAATAAAAAACGAGCGTCGAGAAGCTTCCAAACGCAGACGTTCAACGGGACCCAATCAACAGGACAACAGCTCGGATACCTCCAGCAATGATACCAATGACTTTTACACCAGCAGTCCTGGACCAGGTTCAGTAGGCAGTGCGGGAGCACCGCCCAATAAGAAACAAAGGGTACTATTCTCCGAGGAACAAAAGGAAGCCTTACGTTTAGCCTTTGCCTTAGATCCTTACCCCAATGTGGGCACCATAGAATTCCTGGCCAATGAATTAGGTTTGGCCACACGCACCATAACCAACTGGTTCCACAACCATCGTATGCGTTTGAAGCAACAAGTGCCTCATGGTCCACCAGGGCAGGAAACCAATATACCCACTAGAGAAAATACCAATTCCACACCCTTTGACCCCGTCCAGTTTCGCATTTTACTGCAGCAACGTCTATTGGAATTGCACAAAGAACGCATGGGCCTAAGCGGCAATACACCCTTGCCCTATCCACCTTATTTTGCGGCGGCGGCCTTATTGGGACGTTCCTTGGCCGGCATGCCGGGCACAAATCCTCAAACTGCCTTGCCCACCAATGAGGCAGAGTTACGGGCTTTAAATCAGGCGTTTAGAGAgcaaatgtctggcctggattTATCCATGAGCTCGTTGAAACGTGAGCGTAACGATGACTTTGAGGATGACATGGATGAGTCCCACTTATCGgacaatgataatgatgaaatCGATGATGAAGATAAAACCAGTGAATACCGTAACAGTGCTTTAAATGCAATGAATGCCCAACAGTTTTTGAATAACATGCGCTCCAATCGAAGAAAACCAGCCGCACCGCAATGGGTTAATCCCGCTGTACCCTCAGCTGGGGAGGGAGAACGCATTATTAATGGTGTGTGTGTGATGCAGCAAGGTGacgaacaacagcaacaacaaccaccCGGTGGTGGTAACGAAGACGACATGCATAAGACGATGGCAGCAGAACAGGAAGACAACATGGAAATGGAAGCGGCACATCAATCGTTTATGGAACCCGAAGTAGTTatcaaacaagaaaaagaagacTGCGACGAAAGTGATCAGGAGAAAACGCACAATGCAGAGGAGTTAGCGGCCGCAGCAATGAATGAGGAACGCATCAAGGTGGTACAGGAAGATAAACTCAGAATGGTACGAGTCAATCGATTAAGCAACGAAGATGAAACGTTGGCGGCGAGTAATACTGTAAGTGCTGCTGCAAATACAGCgtggaattattaa
Protein Sequence
MSDERLAHILNEASSLMKSSGPSGLHEHHHQRRASTIPEDSRSNDDSKSPHQPCSSPFFKEHNSKSMGETVMPGQSHLRPDDMNPEKMARLYQELMARAPREAFPGFLLSPFFSGGLPSAAAAASMGGNAFPALAADENMRLAFEREMSKIQQQQQQQQQQQQHAVSQPPSFANFSSLMALQQQMLNGAQDLSLGTEDKPKDSSKVNGQRSSFEITSGNSLSNHGQTTPNNKDSSSASEVERLYPGMMKSEQGNKTPAPLPSSNNSTTNTNSAAPSPLSNSILPPAMTPNEEFSATASPLQRMASITNSLITQPPVPPHHNPPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGLASKMQASLPMQKMMSELKLQEPAHIMQQMQAAAVMSAAMQQHQQQQAAAAQQSQQQAAQAAVQAAQAAAAAQAAQQHHQSMLLTSPGLPPQHAIALPAANSQPSSGSTTPAGPTPDKKPMMMPIHSPHQANAMRNMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGQETNIPTRENTNSTPFDPVQFRILLQQRLLELHKERMGLSGNTPLPYPPYFAAAALLGRSLAGMPGTNPQTALPTNEAELRALNQAFREQMSGLDLSMSSLKRERNDDFEDDMDESHLSDNDNDEIDDEDKTSEYRNSALNAMNAQQFLNNMRSNRRKPAAPQWVNPAVPSAGEGERIINGVCVMQQGDEQQQQQPPGGGNEDDMHKTMAAEQEDNMEMEAAHQSFMEPEVVIKQEKEDCDESDQEKTHNAEELAAAAMNEERIKVVQEDKLRMVRVNRLSNEDETLAASNTVSAAANTAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00892505;
90% Identity
iTF_01315397; iTF_01312820; iTF_01312904; iTF_00997498; iTF_00997613;
80% Identity
iTF_01315397;