Ssub013140.1
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- kn
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000126.1:1470611-1506097[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-92 3.8e-88 297.2 0.0 10 182 71 231 62 231 0.95
Sequence Information
- Coding Sequence
- ATGAAAGACGAAATCCAAGCAAAAGGAAACAGCTTCAAACTGCGCTCTGACGAGGCTGTGCCGGGCTTTAGCTCGGCCTCTCCCTGGCCTACACTTGATCTGGAATGGGGCCGCAAATTGTATCCGACGGCCGCTCCACGAACGGCCAGTGGTCTCATGTTTGGTCTGCCGCCGACTGCGGCTGACATGAATCAACCACGTGGACCAATGACCTCATTGAAAGAAGAGCCGCTGGGAGCAAGAGCCTGGATGCAACCGGTCGTCGATCAAAGCAATTTGGGAATAGGCCGAGCACATTTCGAGAAGCAGCCGCCCAGTAATTTAAGGAAATCGAATTTTTTCCACTTTGTTATCGCTCTTTATGATCGTGCTGGTCAACCCATTGAAATTGAACGGACAGCTTTTATAGGATTCATTGAAAAGGATTCGGAGGCGGATACCACAAAAACCAACAATGGAATACAATATCGTTTACAACTATTATATGCCAATGGTGCCCGCCAGGAACAGGACATTTTCGTACGTCTCATCGATTCGGTAACAAAACAAGCAATTATCTATGAAGGCCAGGATAAAAATCCGGAAATGTGTCGGGTGTTATTAACGCATGAGGTGATGTGCAGTCGATGTTGCGATAAAAAAAGCTGTGGAAACCGCAATGAAACACCATCGGATCCTGTTATTATTGATAGGTAA
- Protein Sequence
- MKDEIQAKGNSFKLRSDEAVPGFSSASPWPTLDLEWGRKLYPTAAPRTASGLMFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSEADTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118478;
- 90% Identity
- iTF_00889914;
- 80% Identity
- -