Ssub013138.3
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- kn
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000126.1:1445111-1447316[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-119 4.3e-115 386.2 0.0 205 385 1 210 1 213 0.99 2 2 2.1e-09 1.5e-05 24.5 14.4 422 512 213 310 210 329 0.70
Sequence Information
- Coding Sequence
- ATGCGCCGTTTTCAAGTTGTCATATCAACGCAAGTGAGTGTTGAGGGCCCTCTATTGGCGATTTCGGACAATATGTTTGTGCATAATAATTCAAAACACGGTCGCCGTGCGAAACGTTTGGATACTACGGAAGGTACAGGCAATTCCTCCCTGTCCATAACGGGGCATCCCTTAGCGCCTGACAGTACCTACGATGgtTTATATCCGCCGTTACCAGTTGCTACACCCTGCATTAAAGCCATATCGCCTAGTGAAGGTTGGACTACTGGTGGTGCTACTGTTATTATAGTTGGCGATAATTTTTTCGATGGCCTACAGGTTGTTTTTGGCACGATGTTGGTATGGAGCGAACTGATAACATCGCATGCCATAAGAGTGCAAACACCGCCCCGTCATATACCGGGCGTTGTTGAAGTGACATTGTCGTACAAAAGCAAACAGTTTTGCAAAGGGTCACCGGGTCGCTTTGTTTACGTCTCAGCCCTCAATGAGCCCACCATTGATTACGGATTTCAACGCTTGCAAAAATTAATACCGCGTCATCCAGGAGATCCAGAAAAACTGCAAAaggaaatcattttaaaaagagCAGCCGATTTAGTTGAAGCTCTCTATTCAATGCCTAGATCACCTGGTGGTTCGACCGGTTTCAATTCGTATGCTGGACAATTGGCCGTGAGTGTTCAAGATGGTAGTGGCCAATGGACAGAAGATGACTATCAGAGAACCCAATCGAGTAGCGTTAGCCCCCGTGGTGGTTACTGCAGCAGTGCTTCAACGCCTCACAGTTCCGGAGGCGGTTCGTATGGCACCGCCACAACAGCGGCAACAAATGGTTATGGGCCCACACCAAATATGGGTACTTTATCATCTTCACCCGGCAGTGTTTTCAATTCCACATCAACTTGTGCATTTTCGCCATTAATTTCAACAGTGTCCTCAACATGGCATCAGGCCCTAGTGCAGCATCATCATTCGCATCCACACCACTACCATCACCCGCATCAGCCTTGGCACAATCCAGCTGtttcagcagcaacagcagccgTCTAA
- Protein Sequence
- MRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSSGGGSYGTATTAATNGYGPTPNMGTLSSSPGSVFNSTSTCAFSPLISTVSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109082;
- 90% Identity
- iTF_00893648;
- 80% Identity
- iTF_01313543;