Ssub016917.1
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- Arid4b
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000178.1:1505239-1507939[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-29 2.8e-25 89.4 0.1 1 88 296 381 296 382 0.95
Sequence Information
- Coding Sequence
- aTGCAGCAAGTGGACGATCCACCCTATCTCCAAGTGGGCACGGAAGTGAGTGCCAAATATAAGGGAGCCTTCTGTGAAGCCAAAGTCAGTGAAGTTGTACGCAATATAAAAGTTAAAGTTGCTTACAAGCAGGGACTTGGTTCTGGTGTTGTTTCGGATGATGATATTAAAGCCTCCCCAGTCCAATTGAGAGTTGGCGCTGTTGTTGAAGTACGTCATCCGGATCGTAAGGATTATGTTGAGGCCACCGTTACAAAAATACAAGATTGCTCCCAGTATACGGTAGTATTTGATGATGGCGATATAACAACATTACGTCGTACTGCCTTATGCATTAAAAGTGGTCGTCATTTCAATGAAAGCGAAACTTTAGATCAGCTGCCTTTAACTCATCCCGAACATTTTGGCAATCCTGTTGTTGGTGGACGTCGTGGACGGCGTCGTGGTCAAATGAATGATGATAGTTCGGATGAAGATGATGAGAGCGATGCCAAGGAAGTGGTTAATGAAAAAGAAGAACACATTGGTAAAGTTGTATGTGTTGAAACAGAGTCGAAGAAAAAGGACAAAGAGAAATGGTTTCCCGGCCTGGTAGTTGCACCAACAGCACAGGCTACTGTTCGTATACGTGTTAAGGATGAATATTTGGTGCGTTCCTTTAAGGATGGACGATATTATACAGTGCCAAAGAAAGAAGCCACCGAATTTACACGAGAAGCTGCTGCTAAGCAGGATGGTCCAGCAGTACAAGCTGCTTTGGAGTATTTAGACAGTGATATTTTACCACCCCACTGGGATCGAGATGCCCTATTTGGTCTAAGTAACTCGTCCAGTGAAAATGAAGATGAAATTGATTCCGATTCCTCGGACGATGAGCCACGCGAAGAGAAGGATCGTTTTGTAGCGCAACTATATAAATATATGGATGATCGTGGTACCCCCTTGAATAAGGTGCCATCCATACAAAATAAAGATGTAGACCTCTATCGTCTCTTTCGTGCTGTACAGAAGAGGGGTGGTTATAATCGCGTTACTTCGCAAAATCAATGGAAGTCAATTGCTTTACGTTTAGGTTTTACGCCCGTTACAGTTAGCATTACGAATTTGGTGAAAcaggcatttaaaaaatttttacagcCTTATGGTGAATTCCATCGTAAATTGGGTTGTTCTATGTTAATGTCACCGCGTAATTCAAATCGCAGCAAAGGTCGCAGTTTGGTGCGTGCCAATTCGGTAGCTTCTCCGAAACCTCAAGATGTCAATAAAGAAACTCCCGCACCCATATCAAAATTGGCTACCACTTCAACGAGCAGTGCTTCTTTAGCCATTGCATCAGCCGTTAATGTTGTTAGTATTGCCAATACTTCTATTACCGAGGAGTCAGAGAATACCAGTGAATCGAGTAGTCATGAAACCACACAGAAGAATACAAAACGCAAATCATCAGTGGGCGGTGCTTCGACATCATCAACCAAAGTTAAGAGTTTAATTGACAAATATGAAGAGAAAACTTCTAAAGACGATGGAGACGTGCCACTGTCTAAAATTAAGGCAGCAGCAGCTAGCAAAGAACGAGAAAAGGAGGAGGCTAAGGAGAAGGAACGCGAGAAAGAGCgtgaaaaggaaaaagaaaaggaacgtgaaaaggaaagagaaaaggagaaagaaaaagaacgggaaaaggaaaaagaacgTGAACAGCGTGAAAAAgaaaaggagaaagaaaaagatCGTGAACGAGAAAGAGAACGTGAACGTGAAAGAGAACGAGAAAGGGAAAAAGATAAGGAAAAGGATAAGGACAGTGGCGGTTCGAAGAATTCTTCTGGTCAAGTAACACGAGATTCATCACCATCTGGTAagtcttatatttttaattcttatttgtga
- Protein Sequence
- MQQVDDPPYLQVGTEVSAKYKGAFCEAKVSEVVRNIKVKVAYKQGLGSGVVSDDDIKASPVQLRVGAVVEVRHPDRKDYVEATVTKIQDCSQYTVVFDDGDITTLRRTALCIKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQMNDDSSDEDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPGLVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREAAAKQDGPAVQAALEYLDSDILPPHWDRDALFGLSNSSSENEDEIDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQNKDVDLYRLFRAVQKRGGYNRVTSQNQWKSIALRLGFTPVTVSITNLVKQAFKKFLQPYGEFHRKLGCSMLMSPRNSNRSKGRSLVRANSVASPKPQDVNKETPAPISKLATTSTSSASLAIASAVNVVSIANTSITEESENTSESSSHETTQKNTKRKSSVGGASTSSTKVKSLIDKYEEKTSKDDGDVPLSKIKAAAASKEREKEEAKEKEREKEREKEKEKEREKEREKEKEKEREKEKEREQREKEKEKEKDREREREREREREREREKDKEKDKDSGGSKNSSGQVTRDSSPSGKSYIFNSYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00655114;
- 90% Identity
- iTF_00997492;
- 80% Identity
- -