Ssub017935.1
Basic Information
- Insect
- Sarcophaga subvicina
- Gene Symbol
- grh
- Assembly
- GCA_936440885.2
- Location
- CAKZFJ020000195.1:629636-706671[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.61 1.1e+04 -3.6 0.1 16 21 82 87 24 103 0.60 2 2 1.1e-63 1.9e-59 201.6 0.4 24 221 434 626 420 628 0.94
Sequence Information
- Coding Sequence
- ATGGGAACAGCATTCTTGTCACCCCAGACGGAGGTGTATAATGTTACGATAAAGGATATTGCCCAGTATATAAGAGAATCTGGTGCTCCCAGTGCCAAGCTAAATGGTCAAACCACACCTCTTGATGTGTCGAGCCTATCGCAAAACGAGATACAAGGCCTGTTGCTTGGCTCACACCCATCAGCGACAACGGCTGCTGTGGCTGCGGCGGCAGCAAATGTCACCACAACAACATCACTggcacagcaacagcaacaacaacaccagcagcaacagcaacaacattcaaCCATAGTTAGTGCATCAGGTGGTGCAGGAGGAGGCAATGGCACAGTGGTTATAACAGCTGATCAGCAGCATCGTCAACAGGGCGCATCGAGTACAGCAACCATAAGCATTAAAAGAGAACCCGAAGATTTGCGTAAGGATCCCAAAAATGGTACCGCTAGCAATGGCTCAGCAGCCAGTAGCGGCGGACACAAGGTTATTGTATTACAACAATCACCATCACCCACACAAATCCATATTAAAGAACCGCCTCCCAGTCCTGGAAGTCCGTCTAATCATACAGAAGCCATGTATGCTGCCGGCGGCGGCACTCAAATTTATCTCCAGGGTCCACATCAAAATTCTGCAGGCGGACCTGGTAGCAATGTAAACACACAAACGCCTAGTCCAGGTCCTTATATTGGAGCCGATGGCTATGGCATGTATACAACTAGTCGCTTGACCGCAGCTCCAACCACCACCACCTTCATATCGGAACCGTACTATCGTGAATATTTTACCACCACTGATGGTCAAGGTTATGCACCCACACGCAGTATATATGGCGACAGTGATGGCCCCCAGCCAGGCACAACATATGAGGGTCGTTtcacaaccacaaccacaaATAGCGGTGGTGTACCACCACCACATCCAGCGGCAAATGTATCCAAAAATAATGGCGGTACACCCATCTATGCAAAGACAGTAACGGCAGCTGGCCTCACCGTTGATTTGCCCAGTCCGGATTCCGGCATTGGTGCTGATGCCATAACACCACGTGatcaaaacaatatacaacAGtcCTTTGATTATACGGAACTGTGCCAGCCCGGCTCATTGTTGGATAATAATGGTGGCATACCCATATCGGTGAATAGCATACAACGTGGTGCTGTTAATGTTCATGGTGGTCAAAATAGTCCCACAACCTCACTGGGCGGTACTAGTGCCAATGGCAGTGCTACACGTTCACGACCCTGGCATGACTTTGGACGTCAAAATGATGCGGACAAGATACAAATACCAAAAATattcacaaatgttggtttcAAATATCATCTGGAATCGCCAATAAGTTCGTCACAAAGGCGAGAGGATGATCGAATAACATACATCAACAAGGGACAATTTTATGGTATTACATTGGAATATATACCCGATGCAGACAAGCccattaaaaatacaacagttaagAGTGTCATCATGCTAATGTTCCGTGAAGAAAAATCGCCTGAAGATGAAATCAAAGCCTGGCAATTCTGGCACAGTCGACAGCATTCggtaaaacaaagaattttagatGCTGATACCAAGAATTCTGTGGGTCTAGTTGGTTGCATCGAGGAAGTCTCCCACAATGCCATAGCAGTCTATTGGAATCCCTTAGAGAGTTCTGCCAAGATAAATATCGCCGTGCAATGTTTAAGTACAGATTTCAGCAGTCAAAAGGGTGTAAAGGGTCTGCCTTTGCATGTACAAATTGATACGTTTGAAGATCCCCGAGATACACAAGTCTTCCATCGAGGTTATtgtcaaattaaagttttctgcGATAAGggTGCCGAACGTAAGACACGTGATGAAGAGCGTCGCGCTGCTAAACGTAAAATGACCGCAACGGGACGTAAAAAATTAGATGAATTATATCATCCGGTAACAGATCGTTCCGAATTTTATACAATGCAGGATCTTACCAAGCCGCCGGTGTTGTTCTCTCCTGCCGACGATTTGGATAAGGGCTTCTATGGCCATGAGACAGATGGTGCGCCAGACTTAAAAGGCGCCTCGCCATTCCTCTTGCATGGACAAAAGGTTGCCACGCCAACATTGAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAAGATCATATACTGGAGCAAGGCTTGAGCATGGGTGAATTTGTGCCACCGCTGAAACGTGGTCGCATGACACCACCCACCAGTGAACGTGTCATGTTGTATGTGCGACAAGAAAACGAAGATGTCTATACGCCTCTACATGTTGTACCGCCCACCACAATCGGCCTTTTGAATGCGattgaaaataaatataaaatttcaacaacgagtataaataatatttatcgaacaaataaaaaaggGATTACAGCGAAAATTGATGATGATATGATATCGTATTACTGCAATGAAGATATTTTCTTATTAGAGGTACAACAGCTGGAGGAGGAACTATACGATATCACCTTAACCGAACTGCCGAATCACTGA
- Protein Sequence
- MGTAFLSPQTEVYNVTIKDIAQYIRESGAPSAKLNGQTTPLDVSSLSQNEIQGLLLGSHPSATTAAVAAAAANVTTTTSLAQQQQQQHQQQQQQHSTIVSASGGAGGGNGTVVITADQQHRQQGASSTATISIKREPEDLRKDPKNGTASNGSAASSGGHKVIVLQQSPSPTQIHIKEPPPSPGSPSNHTEAMYAAGGGTQIYLQGPHQNSAGGPGSNVNTQTPSPGPYIGADGYGMYTTSRLTAAPTTTTFISEPYYREYFTTTDGQGYAPTRSIYGDSDGPQPGTTYEGRFTTTTTNSGGVPPPHPAANVSKNNGGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPISVNSIQRGAVNVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFTNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLTKPPVLFSPADDLDKGFYGHETDGAPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILEQGLSMGEFVPPLKRGRMTPPTSERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQLEEELYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00997477;
- 90% Identity
- iTF_01260759;
- 80% Identity
- -