Sper017935.1
Basic Information
- Insect
- Sarcophaga peregrina
- Gene Symbol
- nfxl1
- Assembly
- GCA_014635995.1
- Location
- CM025792.1:69822300-69825369[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.8e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 19 0.13 1.8e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 19 1.8e-08 0.00025 21.6 16.0 1 18 206 222 206 223 0.98 4 19 1.3 1.9e+04 -3.5 1.9 6 10 249 253 248 253 0.88 5 19 0.00017 2.5 8.9 14.1 3 19 261 278 259 278 0.90 6 19 8.8e-08 0.0012 19.4 12.4 1 19 313 331 313 331 0.99 7 19 0.9 1.3e+04 -3.0 0.5 1 7 356 361 355 363 0.49 8 19 3.2e-09 4.5e-05 24.0 11.1 1 18 366 383 366 384 0.97 9 19 0.31 4.3e+03 -1.5 0.4 1 5 393 397 393 402 0.75 10 19 2 2.8e+04 -5.0 2.3 5 10 407 412 407 412 0.91 11 19 2.9e-07 0.0041 17.7 17.2 1 18 418 435 418 436 0.98 12 19 1.2e-10 1.7e-06 28.5 14.2 1 19 445 463 445 463 0.98 13 19 0.06 8.5e+02 0.7 9.8 9 19 508 518 499 518 0.88 14 19 0.00071 10 6.9 5.9 1 11 530 539 530 540 0.95 15 19 0.33 4.6e+03 -1.6 0.9 6 10 597 601 596 601 0.90 16 19 3.8e-06 0.054 14.2 5.7 1 12 607 618 607 618 0.97 17 19 0.0014 20 6.0 15.7 3 19 647 663 646 663 0.92 18 19 1.7 2.4e+04 -3.9 1.6 8 13 668 673 667 673 0.74 19 19 1.2e-06 0.016 15.8 13.5 1 18 714 733 714 734 0.91
Sequence Information
- Coding Sequence
- ATGCCACCTACTAAAACCAAACAGCAAAATTCATCTAAGAATCCTACAGAGAAATTCAATGAAACACATGCCAGAAATATAGAagtggcaaaaaaaattgtagaaacttATGTCTCGTCTTCTGAAGATGAGGATGACTTGGATGAAAATGCCATATTAAACTCCTTATATCAACATTACAATAAACGCCAGGGAGATGAACATTTACTAGCGAAAACTTCCGgctttttggaaaatgttttgcaATCGGGTGCTGCTACCTGCCTTATTTGTATTGGCAGCATAAAAAGGTCCAGTACAATATGGTCCTGCAAATATTGTTATTGCTTCTTCCATTTGAATTGTATTCAAAGATGGGCAAACGATAGTATTGCCCAGGCAAAGGCCCAAACACAAACTGAACAAGGCTATTACAATCATATGGGAGAATATGTTCCACCTAAGAAACCAAAAGCTGTACATTGGTGCTGCCCACAATGCAGGAGGGAATTTCAACCAGAAGAAAGGCCAACTGAATATGAATGCTTTTGCGGCAAAGAAGTAAATCCTGTTTCACAACCATGGTTAATACCTCATTCGTGCGGTGAAATTTGTGGCAAAGACTTGCAACCAAATTGTGGCCATAAGTGTACTTTGCTTTGTCATCCTGGACCATGTCCACCATGCGCTCAATATGCAGTTGTGTCTTGCAAATGCGGTAAGTCACCTCCAAAATCTGTGCGTTGTGCTGAAAAGTTGTGGGAATGTCAACGCAAATGCGACCTACTTCTACCATGCAAAGAGCATGTTTGCAAAAATCTCTGCCATAAACAGGGTCAGTGTCCACCATGTCAACAAACAAGCATGCAACCATGCGAATGTGGTAGGGAAATGGCTAAACGAAAATGTTGTAATCTAAAGTGGCATTGTAAGAACATTTGTGGCAAAACGTACAGTTGTGGTTTGCATAATTGCAAAAATGTATGCCACTCTGGCGTATGTGGTGATTGTCCCCTAAGCTTACCACGCTCGTGTCCATGTGGCAAATCGaaaaaaGTTGGACCTTGTACGGAAGTAATTGATACTTGCGGCGATACTTGTCAAAAGTTATTAGCTTGtggtatacatacatgtactcAGCGTTGCCATAAAGGAAACTGCAATGCAtgtttaattattataaaaaagaaatgtcgTTGTGGAATGCATGAAAAAGAGTTACCTTGCTCCAAAGAATTTACTTGTGAAACCAAATGCAAGCAAATTAGAGACTGTGGCAAACATCAATGTAATCGTAAgtgCTGCGATGGATCTTGTCCGCCCTGTGACAAGGTATGCGGCAAACCGTTATCATGTGGCAAACATAAATGTCAATCAATTTGCCATAAAGGCCCCTGCTATCCATGCAAACAACAATCACAGGTTAATTGCCGCTGTGGCAAAACGAAAAAGAGTGTACCCTGTGGCAGAGAACGTACAGCACGTGTTGTATGCCTGGAACCATGTCGaataCCATCAAAATGTCATCACTATAATAAGCATCGGTGTCATAAAAATGAGTGCCCACCTTGTACCCAACCTTGTGGTCTACCAAATGACACATCGCAGTGTGGACACACATGTATGGTTAAATGTCACGCCTCCGTTAAGGtagcaaaaaaatcaaatagcCCCAGCATATGGGAGGCTACCAAACAGTTTGAATTTAAGCAAATGCCTCATCCTCGTTGTGAGCAAAAAGTTAGTGTTACTTGCATTGGTGGCCATGAAGTAGCAGAATGGCCCTGCTGGAATTCAAAGCCTTCGTCCTGTCAACGTTTGTGCAATCGTTCTCTACGTTGTGGCAATCATAAATGTTCCTTAGTTTGTCATTCTGTGCCGGACCTAAAAGACATGAAGgaaCAATCTGGTTGTGCGGCTTGTGAGGAGGGTTGTTCTATTCCACGACCGAATGGTTGCACACATAGCTGCCTGAAACCCTGTCATCTACCACCTTGTCCACCGTGTAGTGTTGCTATTAAAAGCAAGTGCCACTGCGGCTTAATGCCTATCGTCTACAAATGCAGTGATTACTTCAACTCTGAAGGTGCTGAAGGCGATATTTTGGAACGACAGGAGAATCTAAAAAGCTGTGGTAACAGATGTTTAAAGAATttccCCTGTGGGCACCGCTGTACAACGAAATGTCATTCTGGTCCCTGTCCCTATCCAGAATCCTGCCGTAAGAAATTACGCATTTATTGCAGTTGCAAGCATTTAAAATCAGAAATTTCTTGTGACAAACACCGTGCTGGTTTCTATAAATTAGAATGCGATGAAaactgtattaaaaataaaaagattctaGAAGACGCTCGTAAACAGGAAGAGGAACTACGTCGTAAACAGGAGGAAGAACGTAATCGTTTGGAAGTGGAGCAATTCGAAAAGAAGTTTAGTAAGCGAAAGCCGAAAGAACCTAAAACCGtagatgtaaaacaaaaaaatccaattaactGGAAAATTGTTGGCTTATACGCTGGTATAGTTGTTGCCATCTTATTAGCTGTTGCTTTAGCCTTCTATGAAGAGCATTAA
- Protein Sequence
- MPPTKTKQQNSSKNPTEKFNETHARNIEVAKKIVETYVSSSEDEDDLDENAILNSLYQHYNKRQGDEHLLAKTSGFLENVLQSGAATCLICIGSIKRSSTIWSCKYCYCFFHLNCIQRWANDSIAQAKAQTQTEQGYYNHMGEYVPPKKPKAVHWCCPQCRREFQPEERPTEYECFCGKEVNPVSQPWLIPHSCGEICGKDLQPNCGHKCTLLCHPGPCPPCAQYAVVSCKCGKSPPKSVRCAEKLWECQRKCDLLLPCKEHVCKNLCHKQGQCPPCQQTSMQPCECGREMAKRKCCNLKWHCKNICGKTYSCGLHNCKNVCHSGVCGDCPLSLPRSCPCGKSKKVGPCTEVIDTCGDTCQKLLACGIHTCTQRCHKGNCNACLIIIKKKCRCGMHEKELPCSKEFTCETKCKQIRDCGKHQCNRKCCDGSCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCKQQSQVNCRCGKTKKSVPCGRERTARVVCLEPCRIPSKCHHYNKHRCHKNECPPCTQPCGLPNDTSQCGHTCMVKCHASVKVAKKSNSPSIWEATKQFEFKQMPHPRCEQKVSVTCIGGHEVAEWPCWNSKPSSCQRLCNRSLRCGNHKCSLVCHSVPDLKDMKEQSGCAACEEGCSIPRPNGCTHSCLKPCHLPPCPPCSVAIKSKCHCGLMPIVYKCSDYFNSEGAEGDILERQENLKSCGNRCLKNFPCGHRCTTKCHSGPCPYPESCRKKLRIYCSCKHLKSEISCDKHRAGFYKLECDENCIKNKKILEDARKQEEELRRKQEEERNRLEVEQFEKKFSKRKPKEPKTVDVKQKNPINWKIVGLYAGIVVAILLAVALAFYEEH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- iTF_01313435;
- 80% Identity
- -