Basic Information

Insect: Sarcophaga peregrina
Gene Symbol: -
Assembly: GCA_014635995.1
Location: CM025793.1:12963290-12968432[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0016 0.13 13.4 1.0 1 23 120 142 120 142 0.98

2 14 5.9 4.7e+02 2.2 1.5 1 22 148 169 148 171 0.89

3 14 7.6e-07 6.1e-05 23.9 0.8 2 23 386 407 385 407 0.97

4 14 0.6 47 5.3 3.9 1 23 458 481 458 481 0.96

5 14 4.6 3.6e+02 2.6 2.8 2 23 544 565 543 565 0.93

6 14 0.021 1.7 9.9 2.0 2 23 736 757 735 757 0.96

7 14 0.57 46 5.4 3.6 1 23 763 786 763 786 0.96

8 14 0.047 3.7 8.8 2.4 1 23 821 844 821 844 0.97

9 14 0.0027 0.21 12.7 0.5 1 23 858 881 858 881 0.96

10 14 0.026 2 9.6 8.5 1 23 1075 1097 1075 1097 0.98

11 14 8.1e-05 0.0065 17.5 0.1 1 23 1102 1124 1102 1124 0.95

12 14 0.0069 0.55 11.4 6.1 1 23 1130 1153 1130 1153 0.94

13 14 0.0033 0.26 12.4 0.4 2 20 1159 1179 1158 1182 0.87

14 14 1 83 4.6 5.3 1 19 1188 1206 1188 1211 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0016	0.13	13.4	1.0	1	23	120	142	120	142	0.98
2	14	5.9	4.7e+02	2.2	1.5	1	22	148	169	148	171	0.89
3	14	7.6e-07	6.1e-05	23.9	0.8	2	23	386	407	385	407	0.97
4	14	0.6	47	5.3	3.9	1	23	458	481	458	481	0.96
5	14	4.6	3.6e+02	2.6	2.8	2	23	544	565	543	565	0.93
6	14	0.021	1.7	9.9	2.0	2	23	736	757	735	757	0.96
7	14	0.57	46	5.4	3.6	1	23	763	786	763	786	0.96
8	14	0.047	3.7	8.8	2.4	1	23	821	844	821	844	0.97
9	14	0.0027	0.21	12.7	0.5	1	23	858	881	858	881	0.96
10	14	0.026	2	9.6	8.5	1	23	1075	1097	1075	1097	0.98
11	14	8.1e-05	0.0065	17.5	0.1	1	23	1102	1124	1102	1124	0.95
12	14	0.0069	0.55	11.4	6.1	1	23	1130	1153	1130	1153	0.94
13	14	0.0033	0.26	12.4	0.4	2	20	1159	1179	1158	1182	0.87
14	14	1	83	4.6	5.3	1	19	1188	1206	1188	1211	0.92

Sequence Information

Coding Sequence: ATGGGTGACAAGGGTTTCGTACAGGATTACACCCTGGTCTGTCGGACATGTCTGCAGTCGAATGTGGAAATGTTAAGTTTAAGCGCGCTCATCAGCGATAATGTTCAAGAAGATGATTCAAAAATCTCTTACATGGAATGCTTAAAAATCTGCATACCAGTGACTGATGAGAACACAAGTGAAATGCCGGCAAGAATTTGTTTAGAATGTGCATCGGCCTTGCAAGTGGCCTACTGGTTTATGAAGAATGCCAGTCAGGCTCAAGAATTATTGAAAGTGAAACTAAAAGAAATACGCCGCAAAAAGCAACAAATTGAACTGGAgcTAGCGGCCGAGGAAGTACGAAAGCCAAAAAGATATCGTTGTAAAATTTGCAATGTGAAAGTTGAAACCAAGAGGTCTCTTAAAGATCATGTAAAGCTACATTTAGATATTATTGTATACAATTGTCAATTGTGCAATTTTGAAAGCCATAATCGCAATAGTTTAAGTGATCATTATGTAGAGGTTCATGGTGTGGAAGCCACCAAGGAACAAttgaaaccaaaaaccaaatcTCCCGCAACAACATCGTTGTCATCTTCCTCCATATCTGCTCctatgaaaaatcaaaattatttaatgggcGCCGTTGCGGATGATCACTATCAAATCGTACCCGAATCCACACAAACCTCATACGAATCAACATTGACAGCTTGCAGTAATAGTGGGTCACTGCAAGTGACCTCACTACCAACAACGAATTCAACAAATTATAACGCATTAGCCACAACAACCTATACCCCGCTAGAGGGTGATCTATCGACTAATGTTAACAGTGATCTCAATGTAGCCGATGAATTTATAGTTTTGGCCGATGGCAGTGTAGAAAAAGTTATGGGAAAAGGTGTTGTTATAGAGTACATAAACGCAACTCATGATGGTCGTTTGTGTCTTGACAATGGTTTAGTTTTGGATAATATCATACAAGTCCAGAATATTGATAACAATGAAATAATACAAAGCCAACAGAGTGATATAATTCAAATGGATGTTGATGATATAATCATTGAGGACACTGGAGAGACGCCAGAAGAAGTTAATGAATGCATTCCCCTGCCTCTAGAGGAGGAAAAAATTCCAGCCACCGTAATTGAGCAGcgcaaaaagattgtgtgtaaaATTTGTACCAAAGACTTTTCTACCCAAGAACAACTCAAAAATCACATGTTAACGCACAATGAAATTCCACACTTCTTTTGTGAtcaatgtaaattttatacattcttTAAAATCGATTTGCATCAACAttataaaagtaaacacaatTTACAACCGACTAGCAAACAATTGCAGcctaaaaataagcaaaaacctGTTAAAGAGGTCTATTCCTGTGATTTGTGCTTTTATCAATGTGATCTAAAAGTTGATCTTAAAAGAcactacaacaataaacataatATTGAAGCCGGTGATATACACCTGAAACCAACACtagtagagaaaaaaaatgctagTCTTTCACCATTATCGGCAAAGGCAAAAGCAGCTGCAACAGTGACTTCATTTACTGCTACAGCATCTtcaaaaaatgtcaaaatacaACCGATTGAAAAGTCATCACCAGACTATCCTAACGGCTTAAATTGTCGTAAATGCCATGAAGTCTTTTACTGGCGCAATAAACTGTACGAACATTATAAATTGCATAATGCCGAAGAGGCCGCCCTAAAACAGGAGAAACAATTCGCAAAAGTTCAACATAAGCAAACATCAAATCTGTATCAGAACAAGACGAAGCCCTTAAAAGCTCAGATACAAACGATCATCTCACAATCACAACCACAATTGAACTCTACAAATACATCAACTTACACCAACATGGACACTCTGGCTCTAAATGTCACCCCTAATAATACTACAATAAGTTCAATGGCACCTCTCACACCATCCTCCAGTTCGACTTATACGCTACCTTCGGACGCCGTTCCGCAAATTGTAGAAACTGATCAGACAATTGAAAATGATATGGATTTCGATTTTAATGGTGACGATGATGCTTTATTCCAAGACTTCGATGATGATGTCGACGTTGAGAACGATTCTGATGAAAACGACAGTGAATTTCGTAATGTTTTGCTGACATCTGACGACGACTTTGAGGATATGTTGCAGGatcaaacaaatttacaaaatgcTGAGACAGTCGCATCCGAATCATATTGTGCTCATTgtcaaaaaggatttttaagcCAGTATCAATTTGAAAACCATATGTTTGTACATAGAGGTCTGGCTCCCTATCGTTGCGAAATGTGTAcaaatttgtataataaaaagcGTTGCTTAATACGTCATTATAAAGCAGTACACAAAAGTGTACCGACCCGTGATATGATACAAGCCAAAGGTGACAAAGtTTTTGTGGAAAACACGCCCATAGATAGTTTGAATTTGGAACAAATTAATTCATCTTTTATGTGTGCAAAGTGCCCTCATGAATGTACAGATTTAGACGAAATGCAAAGCCATTTAAAATCTAGTCACAATATTATAGATGAATCTTATATAATGAAGAaacTTCCTTTTGAGTGTCCACGTTGTATACGATCGTTTGCCAATAAAGTTAAACTTTTGAGACATTTAGAACGAAATCATAGTTTGACACCCATTAATCAACATCAAGTACGTTTTGATACAGCAACTGAAAGTCCACTGATAGTTATAGCCACCAGTACATCATCAACTGCTATAACGACAACTGTCAACAATCATGTAAATATGATGAGTTCTGAAACTAGTGAAACGAACGCAAGTTGCGGATACGATATGTTCGGTAGACAAgcaaaacgacaacaacaatattttaatacaagTCCAAAAAGAAATGAACTCTCAATTGAAGATGCCGTAGcaccaaatattattttacCCGACCTCAAAGACAGCATTGCCCTCTCATCATCAACATCTCTGGCTAGTAATGAAACCTCTAACAACAGCAGTCGCACCTACAATAAGTTTTCACGCACGACATCAACATCAAGCACAAGAAAAGCTACGGGAAAACCTTCAACTTCCATACCGTCCGCCCTAGATCAAAATGGCAGTGATCAACCATTATTCAAGTGCAAATTATGCCATTTCACATGCTATAACATCCAGTCATTCAATGAGCACAGTAAACGCATAGACTGCCGTAAATTTAGTGTCAACTGCCCAGGGGACATAGCCCTATTCGAATGCGAGATATGCCATTGTAATTATAAGACCATGTACTTATTAAAACACCATTTAAAGCGTCATATTGGCCGCAAATTTCTCTGTGCAAATTGTCCAAAAACCTTTATAAGCAATATCGAATTGGAAGCTCACAGGCGTGTGCACAGTGGCGAGAGGCCGCACAAATGTGATGCGTGCCCAAAGTCTTTTCGATACGTGCATCATTTGAAACGCCATAAAGATAGTGTCCACTTTGGCAAACGACATGCCTGCACTGAACCCAATTGTGGTCGGAAATTCACTACACTGGCACAATTAAAAGTCCATGTATGGACGCATAATGGCATTGTGCCCTACAAGTGTAAATTTTGTGatcgtttatttaaaaaacgtcTACTtctACGTGAACACTGTTTTAAAGCGCATAAAATCACGTTAAGCGAAGAAGAAATGGCTGAAATCTTTCGCAACAGTTTGGGATACACAAATCCCCATGACTTTACTGTGACAATTGGTAATGGTAAAATGTTACGACGTGGTGATTTAGAAACAATGGGTGCTTCTGGTGTTATAAAAtcggaatttaaataa
Protein Sequence: MGDKGFVQDYTLVCRTCLQSNVEMLSLSALISDNVQEDDSKISYMECLKICIPVTDENTSEMPARICLECASALQVAYWFMKNASQAQELLKVKLKEIRRKKQQIELELAAEEVRKPKRYRCKICNVKVETKRSLKDHVKLHLDIIVYNCQLCNFESHNRNSLSDHYVEVHGVEATKEQLKPKTKSPATTSLSSSSISAPMKNQNYLMGAVADDHYQIVPESTQTSYESTLTACSNSGSLQVTSLPTTNSTNYNALATTTYTPLEGDLSTNVNSDLNVADEFIVLADGSVEKVMGKGVVIEYINATHDGRLCLDNGLVLDNIIQVQNIDNNEIIQSQQSDIIQMDVDDIIIEDTGETPEEVNECIPLPLEEEKIPATVIEQRKKIVCKICTKDFSTQEQLKNHMLTHNEIPHFFCDQCKFYTFFKIDLHQHYKSKHNLQPTSKQLQPKNKQKPVKEVYSCDLCFYQCDLKVDLKRHYNNKHNIEAGDIHLKPTLVEKKNASLSPLSAKAKAAATVTSFTATASSKNVKIQPIEKSSPDYPNGLNCRKCHEVFYWRNKLYEHYKLHNAEEAALKQEKQFAKVQHKQTSNLYQNKTKPLKAQIQTIISQSQPQLNSTNTSTYTNMDTLALNVTPNNTTISSMAPLTPSSSSTYTLPSDAVPQIVETDQTIENDMDFDFNGDDDALFQDFDDDVDVENDSDENDSEFRNVLLTSDDDFEDMLQDQTNLQNAETVASESYCAHCQKGFLSQYQFENHMFVHRGLAPYRCEMCTNLYNKKRCLIRHYKAVHKSVPTRDMIQAKGDKVFVENTPIDSLNLEQINSSFMCAKCPHECTDLDEMQSHLKSSHNIIDESYIMKKLPFECPRCIRSFANKVKLLRHLERNHSLTPINQHQVRFDTATESPLIVIATSTSSTAITTTVNNHVNMMSSETSETNASCGYDMFGRQAKRQQQYFNTSPKRNELSIEDAVAPNIILPDLKDSIALSSSTSLASNETSNNSSRTYNKFSRTTSTSSTRKATGKPSTSIPSALDQNGSDQPLFKCKLCHFTCYNIQSFNEHSKRIDCRKFSVNCPGDIALFECEICHCNYKTMYLLKHHLKRHIGRKFLCANCPKTFISNIELEAHRRVHSGERPHKCDACPKSFRYVHHLKRHKDSVHFGKRHACTEPNCGRKFTTLAQLKVHVWTHNGIVPYKCKFCDRLFKKRLLLREHCFKAHKITLSEEEMAEIFRNSLGYTNPHDFTVTIGNGKMLRRGDLETMGASGVIKSEFK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01315920; iTF_01314246;
90% Identity: iTF_01315920;
80% Identity: -