Basic Information

Insect: Sarcophaga peregrina
Gene Symbol: wdn
Assembly: GCA_014635995.1
Location: CM025789.1:15898827-15902760[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 6.8 5.4e+02 2.0 0.7 1 21 320 341 320 342 0.88

2 8 1.9e-06 0.00015 22.7 0.7 1 23 346 368 346 368 0.99

3 8 0.15 12 7.2 1.8 2 23 380 400 379 400 0.93

4 8 4.8e-06 0.00039 21.4 1.0 3 23 408 428 406 428 0.98

5 8 3.8e-05 0.003 18.5 5.1 1 23 434 456 434 456 0.98

6 8 0.00037 0.029 15.4 3.0 1 23 462 484 462 484 0.97

7 8 9.1e-06 0.00072 20.5 0.8 1 23 490 512 490 512 0.96

8 8 0.00017 0.013 16.5 2.3 1 23 518 541 518 541 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	6.8	5.4e+02	2.0	0.7	1	21	320	341	320	342	0.88
2	8	1.9e-06	0.00015	22.7	0.7	1	23	346	368	346	368	0.99
3	8	0.15	12	7.2	1.8	2	23	380	400	379	400	0.93
4	8	4.8e-06	0.00039	21.4	1.0	3	23	408	428	406	428	0.98
5	8	3.8e-05	0.003	18.5	5.1	1	23	434	456	434	456	0.98
6	8	0.00037	0.029	15.4	3.0	1	23	462	484	462	484	0.97
7	8	9.1e-06	0.00072	20.5	0.8	1	23	490	512	490	512	0.96
8	8	0.00017	0.013	16.5	2.3	1	23	518	541	518	541	0.98

Sequence Information

Coding Sequence: ATGAATAAGGAAATTCGTATAGACGGCATAACCTCTAAAAATAGTGACATAAATATTgtgatgaaaatgaaagaagaagcAGAGACAAGTAGTAAATTGCCGCCTAAAATAATGGGTGGTGTTGGCGGTTCACCAACAATGGCAACGACCATGTTAAAAACGACCAACAATTCtataaatatttcgaattaCGGTCAAAATTCCACAACCCCACAGAAGCAGCAGAGTGATGAAATTCTAAGCACATTATTGCGTATGAATAACTTCGATTCGATATCGAGTATTAAAGATGAATCGCTGGATATTGACCTGTCCGCTTGTGTAACCATCAGTGCCGATCCCTCGGGCATAATAGGAGGCAATAGTCTATCCTCGTCGGACTTTTGGCGTGTACTGGATGAGAGTGCTCAAACGTCTCAGTTGGATGTCGGCAATAGTATTGTGGGTAATGTATTAGGCGGTGGTGGTTGTAATACTAGTCGGGAGTCTCTGCAAACCTCACCCTCCGCTTCCAGTAATGGCAATTCCTCGTTATCATCCGGTgataaaaacgaaacgaaagtggtggtaaaaaaagaacagaacgATTTTAGTGGTACATTTCTTAAGCCCTCCACCGGCATAACATTCTCACCATTGAAACGTATCATTAAGCCATTGCAAGCAGAGCAACATCATATACGCAAAGATAAGTCGCCGACAAGAGTGGCTAAAACACAGGATACGGGTCCGCCATCTTTATCACCCATTATAAGGATACATCAAACGTTCATTAAACCTCAAGTGGAATTGCCAAAGATAAATAATGGTAGTCATGCAACAGGAAACTTACATCAAGTggttaataaacaacaaaaagattCCTTAATGACAGCTACCCAACCTCCGCCATTGGCTGCTTTAGAAACTCCTGCAAATAAGGAAACGGCGGTGGTGAAACCTTTACCGGAACCTATTTATAAGTGTTTAGATTGTGATAATCTCATATTTCGTGGTAGTCAGAAGCTAAGCGAACACACAAAACAccgtttaatttataaatgtcCAGATTGCGATAGGGAATTCGATGTGGAGACTTCGCTAAAGAAACACTTAAAAACACATCGCCCCATAGATGGCCGTAAGGATGCTTGGAAAAAGTGTCCCGAATGTGGGAAGTGCCTTAAACTTGGTAGCATGTGGATGCATCGTAAAATTCATTCGGAAAACAAGAAATACGGCTGTGAGATATGTGGTCAGAAATTcgtacagaaaataaatttaacccaTCACCAACGCATACATACCTCAGAGAAACCATATGAATGTTCCGAATGCCAGAAACGTTTCCAGGAACGTAGTCACTTGCAGCGCCATCAGAAATATCATGCCCAAACTAGATCATATCGTTGTGAGAAATGTGGTAAAATGTATAAAACCGAACGTTGTCTAAAGGTCCATAATTTGGTGCATCTCGAACAAAGACCATTTGCTTGCACTGTGTGCGACAAGTCCTTTATATCGAAttcaaaactaaagcaacatTCGAATATACATACGGGTGAACGGCCGTTTAAATGCAATTATTGTCCCAGGGATTTTACCAATTTCCCCAACTGGTTAAAACACACTAGACGGCGTCACAAGGTGGATCATAAAACCGGTGAAATGTTAGAAAATATTCCCTCATATTGTTCAAAGAAGTCGACACGTACgccaaaggaaaagaaaactacTGAAGTGAAAAATGCTGCAAACAATAATACAGCGACAGCTGTTTCCTCAGCTACTAATAACACTCCCACAATTACCAATCAAACAACAACGAATACAAAAACGACTGATCTCAATACCGTAGatacaaaacaattgcaattgcagcagcagcaacaacaacagaaaatctTAACAACCTATTCTCCAGGGCTGACCACTACAACAACTGGTCATAGTAGCACCATACCAACTAACGTTTTTACTACCATAACTCTAACAAAGCCCTTATTAAGCGCAACCATCACTACCACTACCGGTAGTAATCATTTGATGGTTAATCAGAATGGACCACCGCCTTTGGCTAAAGTGCCGACTAAACGCAAAAAGAAACAATCGGCGAATCCAGTGGCAACGCAAATGGCAAAAACCGAAAGCGATAATACCTCAGTggtaacagcagcaacaactactacaacatATTTGGTTACTACATCCTCATTGAATATGCCGTCGACTAACAATGGAACAGGCAGTGGGCCACCACCTTTAGCATTGGTGTATAACAGTAGCAAACCTTTGAATTTaaacagtagcagtagtagtacaTTATCTTTGTCATCGACATCAACAAGCAGCTTGAAAAGTtctcatcagcagcagcagcaacagaagTTGCAGCAGGCAAAACAGATATTGCAACATCAGCCTATAAAAGTTGAAAAAGTTAAACGCGAAAGAAAACAACCGACACCAAAGCAAGTCCAACAAGTCCCTCCACCgttgataattaaaaaagaatttatcgaACCAAAAACCGAACTTAATGTACAATCTCAAGATCAGCAACAACATAAGCAGtcacagcagcaacaacaacaaccacgtCTGTCACAACACAATCAGCAGCAATTGCACCCACCGCGTTTACAGGCTCATTCACAATCGTCTCAGCAACAATCTCATACCCCTCACAGCCAACAAACCAAAGTATCAGCATTCACTGATTTACATTGTTTAAGCATTACTTCAGCTGAGGAATTGATAATGGAACAAGCATTAGAAATGGAAGAATGTGGCCTCTACAAAGCTACTGCGGCCAACACACTTGTTTCGAATTTTGCCGATACAGACAATGCCATATCCTCGGATTCAATGGctgatttacattttaaaattaaagaggaaCATCATGATatggatttgaaattaaaaactgaagAGTTTGAGTCCATTAAGAAGCAATCGATTTGTTCATCCCTAGAATCTTCACCATTTTCATCACCTGCCTCTATGGAATTTGCAAACTCCACAACATTAACAAACGATTTTCCAACAAATAACTTTTACTTGCCATCATTTACCATTGCAAACAATCAAATCATTACAACAAATGCTCCTGTAACTACCATGAGCATAGAGGATTGTAGAGGGACGGTGACAACGGCCCATACGTATTTGCCCCAGTTGATAACTACCAATGTTAGTGTGCCCGAACTgatacaaattaataataatcaaaGATATCTGAAGGCAACCACCACTACGGCCAGCAATACAAGTGGTGGCAGTGGTGGTGGCAATACGAATCCATCGTTTATTAACCAGCTATACTTGCCTTTGACAGTTAATGCTGGTCCCgttttaatgaaatcaaatcaagCTTTGCCCTCCGTCGATACACTTTTATTTTCGAATTCAAAACTAAGTAGTCTCTTCAACAATCGAAATTTACCAAAACAAGCCACAACCGCCCAACATAATTTATCCTAA
Protein Sequence: MNKEIRIDGITSKNSDINIVMKMKEEAETSSKLPPKIMGGVGGSPTMATTMLKTTNNSINISNYGQNSTTPQKQQSDEILSTLLRMNNFDSISSIKDESLDIDLSACVTISADPSGIIGGNSLSSSDFWRVLDESAQTSQLDVGNSIVGNVLGGGGCNTSRESLQTSPSASSNGNSSLSSGDKNETKVVVKKEQNDFSGTFLKPSTGITFSPLKRIIKPLQAEQHHIRKDKSPTRVAKTQDTGPPSLSPIIRIHQTFIKPQVELPKINNGSHATGNLHQVVNKQQKDSLMTATQPPPLAALETPANKETAVVKPLPEPIYKCLDCDNLIFRGSQKLSEHTKHRLIYKCPDCDREFDVETSLKKHLKTHRPIDGRKDAWKKCPECGKCLKLGSMWMHRKIHSENKKYGCEICGQKFVQKINLTHHQRIHTSEKPYECSECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEMLENIPSYCSKKSTRTPKEKKTTEVKNAANNNTATAVSSATNNTPTITNQTTTNTKTTDLNTVDTKQLQLQQQQQQQKILTTYSPGLTTTTTGHSSTIPTNVFTTITLTKPLLSATITTTTGSNHLMVNQNGPPPLAKVPTKRKKKQSANPVATQMAKTESDNTSVVTAATTTTTYLVTTSSLNMPSTNNGTGSGPPPLALVYNSSKPLNLNSSSSSTLSLSSTSTSSLKSSHQQQQQQKLQQAKQILQHQPIKVEKVKRERKQPTPKQVQQVPPPLIIKKEFIEPKTELNVQSQDQQQHKQSQQQQQQPRLSQHNQQQLHPPRLQAHSQSSQQQSHTPHSQQTKVSAFTDLHCLSITSAEELIMEQALEMEECGLYKATAANTLVSNFADTDNAISSDSMADLHFKIKEEHHDMDLKLKTEEFESIKKQSICSSLESSPFSSPASMEFANSTTLTNDFPTNNFYLPSFTIANNQIITTNAPVTTMSIEDCRGTVTTAHTYLPQLITTNVSVPELIQINNNQRYLKATTTTASNTSGGSGGGNTNPSFINQLYLPLTVNAGPVLMKSNQALPSVDTLLFSNSKLSSLFNNRNLPKQATTAQHNLS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01313228;
90% Identity: iTF_01315796;
80% Identity: -