Basic Information

Insect: Sarcophaga peregrina
Gene Symbol: -
Assembly: GCA_014635995.1
Location: CM025791.1:102115589-102119376[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.016 1.3 10.3 0.1 3 23 30 50 28 50 0.96

2 17 0.00058 0.046 14.8 2.1 1 23 56 79 56 79 0.97

3 17 0.25 20 6.5 0.2 3 23 84 106 83 106 0.85

4 17 0.0012 0.096 13.8 0.2 1 22 114 135 114 135 0.97

5 17 2.4e-06 0.00019 22.3 0.6 1 23 143 165 143 165 0.98

6 17 0.00013 0.01 16.8 3.5 1 23 171 193 171 193 0.98

7 17 0.00019 0.015 16.3 1.5 1 23 199 221 199 221 0.95

8 17 0.11 8.8 7.6 2.5 2 21 228 247 227 248 0.94

9 17 0.28 23 6.3 0.2 2 23 680 702 679 702 0.95

10 17 0.35 27 6.1 0.6 1 10 726 735 726 748 0.79

11 17 8.6 6.8e+02 1.7 4.7 1 21 756 777 756 780 0.89

12 17 7.8 6.2e+02 1.8 1.3 3 23 786 807 786 807 0.94

13 17 0.15 12 7.2 0.3 2 21 820 839 819 840 0.91

14 17 0.00023 0.018 16.1 0.9 1 23 848 870 848 870 0.98

15 17 7e-06 0.00056 20.8 1.8 1 23 876 899 876 899 0.97

16 17 7.3e-05 0.0058 17.6 1.3 1 23 905 927 905 927 0.98

17 17 0.00047 0.037 15.1 1.1 1 21 933 953 933 954 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.016	1.3	10.3	0.1	3	23	30	50	28	50	0.96
2	17	0.00058	0.046	14.8	2.1	1	23	56	79	56	79	0.97
3	17	0.25	20	6.5	0.2	3	23	84	106	83	106	0.85
4	17	0.0012	0.096	13.8	0.2	1	22	114	135	114	135	0.97
5	17	2.4e-06	0.00019	22.3	0.6	1	23	143	165	143	165	0.98
6	17	0.00013	0.01	16.8	3.5	1	23	171	193	171	193	0.98
7	17	0.00019	0.015	16.3	1.5	1	23	199	221	199	221	0.95
8	17	0.11	8.8	7.6	2.5	2	21	228	247	227	248	0.94
9	17	0.28	23	6.3	0.2	2	23	680	702	679	702	0.95
10	17	0.35	27	6.1	0.6	1	10	726	735	726	748	0.79
11	17	8.6	6.8e+02	1.7	4.7	1	21	756	777	756	780	0.89
12	17	7.8	6.2e+02	1.8	1.3	3	23	786	807	786	807	0.94
13	17	0.15	12	7.2	0.3	2	21	820	839	819	840	0.91
14	17	0.00023	0.018	16.1	0.9	1	23	848	870	848	870	0.98
15	17	7e-06	0.00056	20.8	1.8	1	23	876	899	876	899	0.97
16	17	7.3e-05	0.0058	17.6	1.3	1	23	905	927	905	927	0.98
17	17	0.00047	0.037	15.1	1.1	1	21	933	953	933	954	0.95

Sequence Information

Coding Sequence: ATGGATGGTGATGCCTCAACTTCAACGGCGGCTGCTGATCAAGCCATGCTGGTTAAACTTTCCACTGATGGTGTACCCAAGCTCTTTTGCCCGGTATGTAATAAAGCCTTGGTTTCCTTAGCCGGTTATGTTAAGCATGTAAAGAAACATGAACCGCCCGGCGGTTTTGTATGCCGTTATTGTGAAGCCCGTTTCTGTTCGGAGGAGGAATTAAAGAAACACCGTGAAACCGAGCATACAACCATTGCTTGTCGCCTATGCAAAGATGTTACCTTCACCAATGAAGATGACTATCGTAATCACATTAGAGATATACATCAAGGGGTCGATCGCGAAATTTTCACTTGTGATAAATGTGGAGCCGCCTACAAAACTATTGATCCCTATCGCAGGCATATGAAAACCGAATGTGGCAAAATTAAGCCCTATAAATGTCTCGAATGTCCTATGGCATTTGTaacgaaatataatttaaaacaacacaTGGAAAATCATTCCGGCGAACTAAAGTTTTGTTGCAGTTATTGTGGCCGAAACTTTAAGCAGAAGGCCCGATTGGTTGAACATGAAAGAACACATACGGGCGAGAAGCCGTATAAGTGTGATgtttgtggTAAACGTTTTTCCCATCGTGAAAGTATTGTTACCCACTCCTCCATTCATACGGGCATACGTTTGGTGGAGTGTAGAGGTTGCGGTTCACGTTTCTCCTGTCATTCCAATCTCATTAAACATAGACGCAATCGTCCGGACACTTGTGGCTTGCCAGAATTTGATCCGCCACGAAATCGAGTGAGAAAACACACCTCAAGAATACCTGCAACCTTAAATCCCACATCTGAAATTAAAGTGGTCAATGTCAACAAGATTATTAAACCCGATGATCAAGAGAAAGTGGCCGCCTTGAAAAAAGAGTCAATAGTGGATAAGCCACCTAAAGCAAAATCCACAGCAAGGAAACGTACAGCTGGACCAGCACGTCCCAATTTACGCAAAAGAACAAGTCGTAAAAAGGTTATtgagtttgatgacaacatCTCGGGTgtagaggaagaagaagaagagtttCTAAAAGTTGTGGAATTAGAAGATGACAATGATGACGATGAGGACAATATTCCCTTGAAACCGCCAGTAAAGCAGGGATTAAAAACTGATGCCGAAAAAGATTGTATGCTAAGCTTAATCAACAGTACACGTTGGTCAGACGATAGCGAAGATGAATATTTGCCTGATTTCGATCCAGCTGATACGGATACTGATAATGAAGAGGCCTCAATTAAAGACTTTAAATTACCTTTGGTCACGGATACCATTAAACAAGAGTTCAAAGAAGACGTTGACGATGATGACACTGATGCGGTTATAACCTCCAACATAGAAATCGAACCATTAGCTGACTTTGAATATTCCCGCTTGGATTCGTATACTCTGGATGTAAAAAGCGAAGATGAGGATGAGAATAACTTGTTTGATGAAAAAGATCGTATTTTAGAGCATTTGCTTAACGAAAACGATTATACTCAGACCCAAAGCGAACTGCAGAACAATGCTAACCACTttaatagaagaaaaagaagccGTAAAGCTTTGGAATCAAGAGAAAATCAAGACTCTGACATATTAAAGGAAACCGAagttgtttatataaaatatgaagaCGATGAGAATACCGATTTACCTAGTGAAGATATTTTATTGGAGCAACACAAGACCAACTCTGGTGTTAAAGAGGACATCCAAGAATGTTATATTCTGCTGGAAGATGTGACCAACTGTTTTCCCCAGCTTAAAGAGCAACATACGATTAAAGTGCCTCGTAATGTGCAGCCGTTCTTTTCGAAATccgataaaattaaaagatttattaaaaagcgTGGCAAATATCGGCCACGACGCCCTAAATCTGTTAAAATGGAAGATGCTTCAGATGAAGATAGTAAATCGAATTCAGGTAAATCTTATCGTTTGGCCTCCATTTCAGCCAAGCAGTTGAAAGAACGCATTAAACTGTTAAAGAAACGCGATAGAACTTGGCAATGTCCGGATTGCATTAAAATCTATTACATGCGCAAGCCCTATGAACGGCATTTAAGAGAGGACCATAAAAAATCGGAAGATTTTATTaaggaaatattcaaaaacgaTTTGGAAGAAGTCAAAACTGATGATGTATTCAAATGTCATATATGCGATAAGATATACTTGATGGAAAAACGTTTACTGTCACATATACCCAAACATGGACCGGAAGGTAATTTAATACACAAGTGTCCCTGCTACTGCACTTTGTATTTTGCCACACGCGAAGAAGCCACCAGTCATGCTCATGACAAACATAAAGATTTGCTGTGGTGTGAACTTTGTGAGAAGTTCATGACCGGCTGTGATGCTCTCAAGTCCCATAAGGCGCGCATACATGGCGGCAATAAGGAATACAAAAGTTCACGTAATCTAGTGTGCATGAAGTGTGGAAAGAAATTTCTGGGACGTACGCAACTTACAGATCACGAACGTTCTGATTGCGGCCGTTTGCCTTTATACCAATGCCAGGAGTGCGGCAAGTGCCTAACCACTGCAGGCATATTAAAAACTCATATGCTGCTGCATGACGATGCTCGCCCCTATCAATGTGATAAATGTGGCAAAACATTCAAGATTAAGGCACAATATAAAACGCATATTAAGTATGCTCATACCGATGAGAAACGCTTTAAATGCCATctttGTCCGAAGGAATATCCCTATCGGGAGAGTTTACTTACCCATATGTCCGTGCATACGGGCATCAAACGTTTTATGTGCAATGGCTGCGGCAAACGTTTTACCTGCGTGTCAAATCTGCAGGCGCATCGCAAGGTACAGGCTGAAACTTGTGGCCAGCTGCCTCTAAATGCAAAGGCTACACAGTATATGGGCGTACAAAAGGGTAATTTACTAATAGGTGCGAAGCCAGAGCCAGGTTTAGACTATATAGAAACGAGAACGTTTGTAGCCAAAGATGTCATAACTCACGATTCGCCCATGGCTCAAGAACTGCACAATCAAAATAGATCTTTGCAGCAAGATAACTCTTTAAGTGATGGCATACCCTTGAATTATGTTACGTCGGgttctgaaataattttaatgtataataataataataatagcaatagaAGTTAA
Protein Sequence: MDGDASTSTAAADQAMLVKLSTDGVPKLFCPVCNKALVSLAGYVKHVKKHEPPGGFVCRYCEARFCSEEELKKHRETEHTTIACRLCKDVTFTNEDDYRNHIRDIHQGVDREIFTCDKCGAAYKTIDPYRRHMKTECGKIKPYKCLECPMAFVTKYNLKQHMENHSGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKRFSHRESIVTHSSIHTGIRLVECRGCGSRFSCHSNLIKHRRNRPDTCGLPEFDPPRNRVRKHTSRIPATLNPTSEIKVVNVNKIIKPDDQEKVAALKKESIVDKPPKAKSTARKRTAGPARPNLRKRTSRKKVIEFDDNISGVEEEEEEFLKVVELEDDNDDDEDNIPLKPPVKQGLKTDAEKDCMLSLINSTRWSDDSEDEYLPDFDPADTDTDNEEASIKDFKLPLVTDTIKQEFKEDVDDDDTDAVITSNIEIEPLADFEYSRLDSYTLDVKSEDEDENNLFDEKDRILEHLLNENDYTQTQSELQNNANHFNRRKRSRKALESRENQDSDILKETEVVYIKYEDDENTDLPSEDILLEQHKTNSGVKEDIQECYILLEDVTNCFPQLKEQHTIKVPRNVQPFFSKSDKIKRFIKKRGKYRPRRPKSVKMEDASDEDSKSNSGKSYRLASISAKQLKERIKLLKKRDRTWQCPDCIKIYYMRKPYERHLREDHKKSEDFIKEIFKNDLEEVKTDDVFKCHICDKIYLMEKRLLSHIPKHGPEGNLIHKCPCYCTLYFATREEATSHAHDKHKDLLWCELCEKFMTGCDALKSHKARIHGGNKEYKSSRNLVCMKCGKKFLGRTQLTDHERSDCGRLPLYQCQECGKCLTTAGILKTHMLLHDDARPYQCDKCGKTFKIKAQYKTHIKYAHTDEKRFKCHLCPKEYPYRESLLTHMSVHTGIKRFMCNGCGKRFTCVSNLQAHRKVQAETCGQLPLNAKATQYMGVQKGNLLIGAKPEPGLDYIETRTFVAKDVITHDSPMAQELHNQNRSLQQDNSLSDGIPLNYVTSGSEIILMYNNNNNSNRS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01313164;
90% Identity: iTF_01314025; iTF_01313164; iTF_01315703;
80% Identity: -