Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: ZNF541
Assembly: GCA_958299815.1
Location: OY283150.1:18886282-18897758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 7e-05 0.0074 17.7 0.3 2 23 392 413 391 413 0.97

2 5 3.1e-06 0.00032 22.0 1.5 1 23 419 441 419 441 0.99

3 5 0.00018 0.019 16.4 2.6 1 23 447 471 447 472 0.95

4 5 0.00088 0.093 14.3 0.8 2 23 718 739 717 739 0.97

5 5 0.0024 0.25 12.9 0.1 1 23 1920 1944 1920 1944 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	7e-05	0.0074	17.7	0.3	2	23	392	413	391	413	0.97
2	5	3.1e-06	0.00032	22.0	1.5	1	23	419	441	419	441	0.99
3	5	0.00018	0.019	16.4	2.6	1	23	447	471	447	472	0.95
4	5	0.00088	0.093	14.3	0.8	2	23	718	739	717	739	0.97
5	5	0.0024	0.25	12.9	0.1	1	23	1920	1944	1920	1944	0.97

Sequence Information

Coding Sequence: ATGTGTAGCGCATCGGTGGGCACAACAGAAGCTTCGGTGACATTACAATTGCGCGATGTCAACAATTCCAATGATTCAATACAATCGTTACAATCCTATCAATCCAATCAATCATCATCCGAAACAGCCGCTGCGGCAGCAACAAATGTTCATCATATTGCAACAGTTGGTTCTGGTACAGTATCAGCTattacaacaacatcatcaacaacaacaacagcaacagcaacaacaacattggaTAATGCATTAACCATCGGTTATCCAGATCCAGAAATGTTGGCTGATGTCTTAGGTACATTACAAACAGCATCTTTAAAGAATACAAATCCCAGTGGTGagagtacaaaacaaaattcctcAAAATTAACGAATACCAGCGATattacaacatcaacaacaaatttaaatggtTCGATTAAAAATCGTATAACAATTAGTAAACGCTCCGCGAATATCAACAATAATTCccaaaataccataaataatcacagcaacagcaacagcaacagcaacaataatagtaGCAGTAGCAACAGTAGCAGCCACAATTTATCTTTAAGAGATATTGGCAAGACGACTACCACCTCAGCAGTGCAGACAGTTTCGACCTCAACAAATACTACCAACGGCGTGAATAAGACTAATAGTTACATAAAGAATTGCTTGATACGCAGCAGCAGTTGCAGCAATACCACCAATATAACCTCATTGGCTCAGATAATGagcaatagtagtagtagtagtagcaacgGTGGCAGCAGcaataatagcaacagcaacagcaacaacaatagcaacataaacagtaataataacaacaacaataatagcaacagtactactactactacaaccacCATCAATTGTAACAGTAACGTTAACGGTattaatagcaacaacagccaACTTAAtagcagcaatagcaacagcttaacaaataataataacagcagcagcatcaacagTTGCAATAGCAATTTTAGCTCCAGCAGTAACGATAGCTGTTTCAGTTATAGCAGCAATAGCAGTAGCGGCAATTCAATTGCACGTAGCATAACAACGTTGAGTCACGGTAGCCGTAAAGTTCCTGGTCCCTTAACAACAAATCCACCGAAAATCTTAAAGAAAAGTCGTTCGAAAATATCATCACCTAGTCGTCACGGACCGCAGCAGTGTCAGatttgcaataaaatttttggaaatgcaTCAGCTTTGGCCAAACACAAACTGACACACAGTGACGAACGGAAATACGTGTGTGTTATGTGCTCAAAGGCATTTAAGCGACAAGATCATTtaaATGGGCATATGATGAcacatagaaataaaaaaccttATGAATGTAAAGCTGAAGGTTGTGGCAAATCATATTGTGATGCACGCTCTCTAAGAAGACACACTGAAAATCATCACGCCGGTATTATAGCACCACACAATCAACAAATCtcattaaacaataataattccaATTCAAATTTAAGTTTATCTCCAGCAACAGCAAATGGCGATGCCAGTTCACCGGATGGTGCCACCTGTTTAGGTACTTATCTATCGAATGGCGGTACTGTTGTAGATGCAGCCACTGGCTTGGCCTTGACTGAAGAAGAACTGAAAGCTTTAAATGTGCCCCTTAAAACAGGCGTAACTCTACTGTCGCCCACATCAACAACTTCCTCCATGTCGTCCTCTAGCAGTTTATCCTCTGGCCCAGGTGCCACTATTACTTTGACAGATAATAGCGGCAATTTGGAGGGCGAGGGTTTAACACGAGAACAATTGGATTTGATAAGTAAAATCATGAGACAAACGAAACAAACCACAGCTCAGGTGACAGTATCATCGCCTACCAGTAGCCAATCGTATAAAATCGATACAAACCCCCAGGCAACAGTGCAAACACAGACACAGAATTCCCGACCCAGAACCTGGAATATGCAATTGcTTAATCCCTCCCAAAATGTTGCCATTAGCGTGGATGAATTGAGTGCCGATAATACCAATgatgccaccaccaccaccactactaccACTACACCCAGCAATAATATGTCCCAAACCAaattgaaagaagaagaaattgaaattgatttaacCAATGCCATCAATtcgaatttgtttaatttggttAAAATTGATCAGAAGCCGGTCGAGTGTAATTTATGTCATcgcaaatttaaaaatgtacccGCCTTAAATGGTCACATGCGTTTACATGGCGGCTATTTTAAAAAGGATCCCGAAACGAAAAAGAGTGAGAAAAAAGAGAACAGTGGCCCGCCCTTACAGACGGCCAGTATCGGTGTTAGAGCTTTAATTGAAGAGAAAATCATTAGCAAACGTAGTAAAGATTTAAACAAGggTGCCTTTGTAGTTCCTGCACCACCCTCCTCCAGTAGTAATCCAACAAATACCACAACCATACGTAGATCCATAAGTGATTTGGATAGTTTTCTTAATCCCAAAAATCAAACGAATAGTACAACTGCAACCATGCAACAGAATACTAACcaccagcagcaacaacagcagcagcaacaacatcagcagcagcagctaacaatgaaaaataattgcaaatcaAGCACCATTAGTGTGCAAGACATTAATTTGCCCCAGAGTATCGAAATTTATAGTacgaagcaacaacaacagcaacaacaaaagacaATGAACAATATTGGCGTGGGTACCACCAGCAACAATACCTCTTCTTCGTCGTGCGCCTCCTCCAATTCCTCCTCAGCAGCCTCATCATCGTCAATAGGGAATATACACTGTGAACGTCAAGCAacgaaaattacaacaacaagcGCAACAGCAGCAACGATTAACACAACGACTTCGAGAAGTACATCAACCGATCCAAAAGATTCGACGCTGATCGAATTACTGAAACGTGGTACACGCATAGCTGTAACCCAAAAACCGCCCAATATCAATCACAACACACCCTTGGGTGGTGTTACACGCCAAATCATaacgaataaaaacaattgtagCGTGATTATACCCTCCGAGGTCCAGGTGGTCTCCACAAAAGCCAAACATAAAAAAGATGAGAACCTCCAGATGGCCAATGCCACCAATGTTACGTTGGCCGATGGTACACCCCTATCCCTGACCATAGCTCAGGGGGCGGATAGCAATAGTGAGGTGTATACGGTTACCTATACCAGTGATGGTTCAGCTTTATTCGGTGAGTCCGAGGTTTACAATGTAAGCGAGGCTGAAATGTTGCTGCAAACCGTGGACACCATGCAATTGTTGGCTGCAGAGCCAGGCGATAATATAAAATCAGAACATTCCGAGCAATATGAGGTAttggataataaaattaaactggaAATAGAACAgccacagcaacagcaacagcagcagctacaacagcaacagcaacatcagcaCAATACAATTCAGTGTCAGACAACACAAACTTTACCAAACTTCCAACATTTCCATTCCAAAGAACTTATCATACAAAATCCCAACATAATTACAcaccaacagcagcaacagcagcatcagcagcacCTGCAACATGTGTCACATATGCGTACACACAATACTTTGACTTTGCCTCAGGACCTTAAGCAACAGTTTGCCACCAGTCTTAACTCTCCATTACATTCGCCTTTGGCTTATCCCACACCACCCTCCAGCCATGAAAATGTTACGCAAACTTCGCCGTACATTGAAGACCACAATCATTACAATGGCTCGCAAAATATCTTCTTCAGTGAGTCATTGATTAATGGCCACAACCATGGCAATGAGATGGAGaacgacaaaattttaaaattgaaaaatgttttggaGGACAATTCCTTTGACTCCAACATTAAAGTGGAGGATTTACTTAATGGCAGTACCGATCCAGATACAGAATGTGATTTGCGGGAATTTGCCGAAGCCAATCTATCCTTTCTGGATGAGGATCAAGAGTTCTTAAACGATTCTCGCAATGCCACTTCACCGCTATCGGAATCGTTTTTCACCAGTGGCATAGGTACTGCCGAGGAAGTTAAAGAGGTCTTAAGGGAGGTCCTAACAGAAGATCAACTCAATTTGAATTGTGAAAATCAAGGAGAGAATATAATCGATTTGTATTATTTGCCTGGACTAAGTTTGCAATCGCAAATGATGCCCAACTCGGAAGATCCTTTGCTATCGTCGTCACCGCGAGATTTTGGCCAGCAGCAGAaattgcagcaacaacaacagccaacaaTTCAACAGCAGCCAAATCTTTCGgttcaacagcagcagcaacacattcctaaccagcaacaacaacaacagcagcagcaacagcagcaacaaaatcTACAATATACCCAACAGCAGCAAACTGTTAAAGTAACCCTGGATTGTAATAATCAAACCGCGTCTCACGATGTTAATTCTACCACCACCGCCACTAACACCGAAACAggccaattaattttgaatctaCCCTCTGCTAATGTCATACAAAATTCCTCTTCCGCCTCCTCATCTGCCCCTGCAACTATACACTACAATGTACAAAACTTGCCACAAGTACAAAATTCTTTAACTAgtaatcaacaacagcaacatcagcagcagcagcagcagcaacaaaatatgccccaacagcagcaacaacaacagacacAATATCTTAACTCCACTACCATTAATACGCTCAATGAGGCCTTAATGCAGCCTATAATTTATACAAGTGGTACCACCGATAAAATGGACATAAAATTAGACACTAACAGCACGCCCCCTAACAGCAGCTCCCTTAGCCACAGCCACAGCCACAGCCACACCCATGCCAGCAgccaatttcaaaatattgttacactGCAAAAATcctcaacaacatcaacaagcCATATgatatatcaacaacaacaacagcaacaacaccagcAGCATCAGCACAACACCACATCCCATACACATACCTCGACCACTAGTCTACAGCCTCTGTCGAATCAAACCAATTCGATATTGAAAAGACGTTTAAAAGGTCACGGCCATTCCTCTTTGGACAACTCACATACACACTCTTCATATTCCAAATACCAGGCTTTGTCGCCATACAAATCGAAATTACGTAAACCGTCACGCACTCACTATACGCCAGCGCCCATCTTAAATCCCGAACGCAAGGGCCAGGGTTTGTATTGTAATGTCTTAAGACAAATGGGCTGTTCCCTCTTGACATTCGATACTTTCGATGATGATTTCGATGATCCCGTGGGTTTGGTTGATTTCTCCGATGAATCCAAAGTTAATTTGGGTTCTGCCTATCAAGCCGCTATACCTGCATTTAATGAGAACGCTGCGCCTTCGTCTATTGACGAACCTGTCGGTTGTGAGTTGATGTGGAATCCGCTGGTACAAAAGGATGAAAAGATTTTAATGCGTTTCATCGATTTGAGTAAATCATCGGCTGTGCCATTGGGCAGTCATTCTGAGGAGGTGGCTTTGCAGGCTTTACTTAAGGCTCAAGGCAATTCTGCTACGGCTGTATTGAGTTTGTTGCAGACCCAATCGAACTCATTCCAAATTAAATGGTCCTCACAAGAACTGGAAATATTCCTGAAAGGCCTTGAGAAACATGGCaaggaatttaataaaattgcaaaagagCTGGGCTCAAAATCGACGGGAGAATGTGTACAAATGTATTACTTCTGGAAGAAACTATGCGTGGACTATAAGGTAACCCACCTAAAAACTGAAACGCCACCACAAAACCACACCAGCGATCCCAAGCCCTATGTATGCGAAATACCCGATTGTTCAGCGAGTTTTTCTTCAAAAGCTGCTCTGCATGGCCATACGCGTATACATACCTATggccgtaataataataatcataataataatcacaacaataacaacaacaacaataataataataacaatgcaaatgcaaatgctACTAATAATACAAATGCAAATACCACGCAAGGTTCTGCTACCAATAATACAACCAATAGCCATCCCATGCATAATAATAATACCCAGTCAAGTAGTATACACGCCACCAGTAGCACCAATACCACAGCAAATCCAAATCAAACCAAAGATCCAAATGCCAATAAAGACAATACAACAGAATTCCCCTGCAAGGTGTGCGGCAAGTAA
Protein Sequence: MCSASVGTTEASVTLQLRDVNNSNDSIQSLQSYQSNQSSSETAAAAATNVHHIATVGSGTVSAITTTSSTTTTATATTTLDNALTIGYPDPEMLADVLGTLQTASLKNTNPSGESTKQNSSKLTNTSDITTSTTNLNGSIKNRITISKRSANINNNSQNTINNHSNSNSNSNNNSSSSNSSSHNLSLRDIGKTTTTSAVQTVSTSTNTTNGVNKTNSYIKNCLIRSSSCSNTTNITSLAQIMSNSSSSSSNGGSSNNSNSNSNNNSNINSNNNNNNNSNSTTTTTTTINCNSNVNGINSNNSQLNSSNSNSLTNNNNSSSINSCNSNFSSSSNDSCFSYSSNSSSGNSIARSITTLSHGSRKVPGPLTTNPPKILKKSRSKISSPSRHGPQQCQICNKIFGNASALAKHKLTHSDERKYVCVMCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGIIAPHNQQISLNNNNSNSNLSLSPATANGDASSPDGATCLGTYLSNGGTVVDAATGLALTEEELKALNVPLKTGVTLLSPTSTTSSMSSSSSLSSGPGATITLTDNSGNLEGEGLTREQLDLISKIMRQTKQTTAQVTVSSPTSSQSYKIDTNPQATVQTQTQNSRPRTWNMQLLNPSQNVAISVDELSADNTNDATTTTTTTTTPSNNMSQTKLKEEEIEIDLTNAINSNLFNLVKIDQKPVECNLCHRKFKNVPALNGHMRLHGGYFKKDPETKKSEKKENSGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPSSSSNPTNTTTIRRSISDLDSFLNPKNQTNSTTATMQQNTNHQQQQQQQQQHQQQQLTMKNNCKSSTISVQDINLPQSIEIYSTKQQQQQQQKTMNNIGVGTTSNNTSSSSCASSNSSSAASSSSIGNIHCERQATKITTTSATAATINTTTSRSTSTDPKDSTLIELLKRGTRIAVTQKPPNINHNTPLGGVTRQIITNKNNCSVIIPSEVQVVSTKAKHKKDENLQMANATNVTLADGTPLSLTIAQGADSNSEVYTVTYTSDGSALFGESEVYNVSEAEMLLQTVDTMQLLAAEPGDNIKSEHSEQYEVLDNKIKLEIEQPQQQQQQQLQQQQQHQHNTIQCQTTQTLPNFQHFHSKELIIQNPNIITHQQQQQQHQQHLQHVSHMRTHNTLTLPQDLKQQFATSLNSPLHSPLAYPTPPSSHENVTQTSPYIEDHNHYNGSQNIFFSESLINGHNHGNEMENDKILKLKNVLEDNSFDSNIKVEDLLNGSTDPDTECDLREFAEANLSFLDEDQEFLNDSRNATSPLSESFFTSGIGTAEEVKEVLREVLTEDQLNLNCENQGENIIDLYYLPGLSLQSQMMPNSEDPLLSSSPRDFGQQQKLQQQQQPTIQQQPNLSVQQQQQHIPNQQQQQQQQQQQQQNLQYTQQQQTVKVTLDCNNQTASHDVNSTTTATNTETGQLILNLPSANVIQNSSSASSSAPATIHYNVQNLPQVQNSLTSNQQQQHQQQQQQQQNMPQQQQQQQTQYLNSTTINTLNEALMQPIIYTSGTTDKMDIKLDTNSTPPNSSSLSHSHSHSHTHASSQFQNIVTLQKSSTTSTSHMIYQQQQQQQHQQHQHNTTSHTHTSTTSLQPLSNQTNSILKRRLKGHGHSSLDNSHTHSSYSKYQALSPYKSKLRKPSRTHYTPAPILNPERKGQGLYCNVLRQMGCSLLTFDTFDDDFDDPVGLVDFSDESKVNLGSAYQAAIPAFNENAAPSSIDEPVGCELMWNPLVQKDEKILMRFIDLSKSSAVPLGSHSEEVALQALLKAQGNSATAVLSLLQTQSNSFQIKWSSQELEIFLKGLEKHGKEFNKIAKELGSKSTGECVQMYYFWKKLCVDYKVTHLKTETPPQNHTSDPKPYVCEIPDCSASFSSKAALHGHTRIHTYGRNNNNHNNNHNNNNNNNNNNNNANANATNNTNANTTQGSATNNTTNSHPMHNNNTQSSSIHATSSTNTTANPNQTKDPNANKDNTTEFPCKVCGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01315446;
90% Identity: iTF_01315903;
80% Identity: iTF_01313746;