Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: -
Assembly: GCA_958299815.1
Location: OY283150.1:42041992-42049033[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.1 11 7.8 0.6 1 23 1669 1692 1669 1692 0.91

2 12 3.7 3.9e+02 2.9 0.8 1 23 1857 1879 1857 1879 0.93

3 12 0.00076 0.081 14.5 2.8 2 23 1882 1903 1882 1903 0.97

4 12 0.00028 0.029 15.8 0.2 3 23 1911 1931 1909 1931 0.98

5 12 7.5e-06 0.00079 20.8 5.8 2 23 1938 1959 1937 1959 0.97

6 12 8.6 9e+02 1.7 0.1 5 23 1972 1990 1971 1990 0.96

7 12 0.037 3.9 9.2 0.1 2 23 2029 2049 2028 2049 0.96

8 12 0.0003 0.031 15.7 0.4 1 19 2055 2073 2055 2077 0.95

9 12 5.1e-06 0.00054 21.3 1.8 1 23 2085 2107 2085 2107 0.99

10 12 0.00018 0.019 16.4 6.5 1 23 2113 2135 2113 2136 0.96

11 12 0.0011 0.11 14.0 6.4 1 23 2141 2163 2141 2163 0.99

12 12 0.0027 0.29 12.7 6.0 1 23 2169 2191 2169 2192 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.1	11	7.8	0.6	1	23	1669	1692	1669	1692	0.91
2	12	3.7	3.9e+02	2.9	0.8	1	23	1857	1879	1857	1879	0.93
3	12	0.00076	0.081	14.5	2.8	2	23	1882	1903	1882	1903	0.97
4	12	0.00028	0.029	15.8	0.2	3	23	1911	1931	1909	1931	0.98
5	12	7.5e-06	0.00079	20.8	5.8	2	23	1938	1959	1937	1959	0.97
6	12	8.6	9e+02	1.7	0.1	5	23	1972	1990	1971	1990	0.96
7	12	0.037	3.9	9.2	0.1	2	23	2029	2049	2028	2049	0.96
8	12	0.0003	0.031	15.7	0.4	1	19	2055	2073	2055	2077	0.95
9	12	5.1e-06	0.00054	21.3	1.8	1	23	2085	2107	2085	2107	0.99
10	12	0.00018	0.019	16.4	6.5	1	23	2113	2135	2113	2136	0.96
11	12	0.0011	0.11	14.0	6.4	1	23	2141	2163	2141	2163	0.99
12	12	0.0027	0.29	12.7	6.0	1	23	2169	2191	2169	2192	0.96

Sequence Information

Coding Sequence: ATGACGGAAAACGTTCAGTGTCCAGTATGTACTTTATACCTACATGCGGGTATGAATCTTTCGGATCATTTGGAGACACATCCAAAAGAACAAGTTATACGAGCTTTAGTACAAATGACTATATCGAGTGGATCAGGAGTTGGAAAAGGTAATGCTTCATTAGCATCTGTTTTAGGCGTAGAGACAAATGGTACCGCCAATGAAACGAAAAAATCCAACAgggagaaagaagaaaaaccaTTGCCGCCAAATCTAAAAGATAAGGAGCTAAATGCTGGGATTGGCGTACAAAGTTGTAGTGCCGGTACTACTATCTCTACAAGCAATAGTTCATCATTGAAACATAATGGTAGTAAAAATTCTGACAACATATTGAATTTCTCTACCACTAATAGCGAAGGGAATAATGAAATCGAACATCTTAGAAAAGATCACTCACCGCCTAGTCTGCTAGCCAAGGCTTCTGTTAAGGCTGAAGTTAATTCGATAGTAAAAGACCACAGTGTAGGTAGTAATGAAAACGTGAACGAATGTTTTACGAAAAACACTTTTAGTCTATCGAATGCGTCTTCAAATTCTACAACAATCACGAGTCATTCATATCATCAAGCTCCGGTAGAACTAACCAATTCAAACAGCATTCACAATAGTTTTTCTGTGTTTAGTGGTAATCAACGCTAcgatcagcaacaacaacgcaATTCGACAAACAACCAGAATCAAATACATACAACTCCACGTATGCCTCCGCCACCGCCTCCACCGACATCACAATCCCAACTTCAGGATATTAATCGCGGAATTTTACCATCCGGACCAAGTGGAACGTTCCAATCGATACAGCCGCAACAATTAACGCATTCACCACTCCCACCGCATCATCTTAATACTACGCCATCAAACAGTAGTCATCGCCAGCAACAGATGTTTGTTGGCCAACATCAAACATCGTCAAATTCCCAACATCAACAGAATTTGAAAGTTATTTATGCGCCAACATTACCGCCACCTCCTCCGTTGCagctTTTCACTTATCAACCACCAACACATTTGCAGCATCACCAAAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATctcaaaataatcaaaataagcATCAAGTCACAGGGTCATCGGCAGCgcatcaacaacatcaaactTTACAGGCGCATATAGCTTTGCAGCAGCAGCAAGTTCAAAATttacatcaacaacaaaatttgcatCATAATGTAAGAATTCATGTACCACCGCCTCCATCACCAATACCAACTCCAGTAAAACTGTCCTATTCAACTAAAAATCAAGAATTGCCTGCTCAACATCATGTTGCAACGGTCAGACataatcatcaacaacaacaccagccccatcaaaataaaacagttttgtcacaacaacaacagcaacaaccgcAGCAGccgcagcagcaacaacagaacaataacgaaaatattcaaaattccaaGAATCATGTTATAAATTCcaatgaaatattgaataaatctACAAAGAGTGGCTCATCAACGAGTGCTGGAGCTGGAACATCAGCAACGACAGTTAATAATGCGAACGCTCCATCACATCCACATGTTTCAATCAGTCCATCTACAGCTTCAGCTTCAATGGCTGCTGTGGCAGCGTCTACTTTAGTCCGGCATACAAATTCTCCTTTTGCGGCTTTATTAGCAGCTGCTGCCGGAGCTCCTTCACCCTCTACATCTTCTTCAGTTCTAAGATATGCAGAATCACCTGTAGCCCATTACTTGGAGCGGGAAAATGGAGATTTCATTGTACAGGAAACACCTAAACATATTGTTGAATGTGTCGAAACCGACAATGGAGAATTTTCAGTCATAGAACGTATATATCAATCGCCACCAAGTGTTTTACATATtcacgatgatgatgaagaagatGATGACGATAGTGGCAGAGACCAAATGGAATCTTCTGTAGACAATGAAAGTACTGACATTAAGAGTAAAAAACAGGAGGTATCCCAAGACAGTGATAATGAAAAAATGAAGCAAAATACTgttgaaaatcataaaaaaattcagaattcCCTTGACGACAATTGTAAAATGTCAAATCATTCAGATCCTCATCAGCCAGGTGCAAATGAAATTGTTGATTTTGTAAGCATTTCCAGCGACAGTGGTGATGAAGAGGAATTTATATCTCAAGATCGAAAGGATCACAGTACCACCGAATCTAGTGCAAAGATTCAACCATCTACAACACCTTCATCTACGTCGCAAACAACGTTGTCACTTCTGTCGTCATCATCGTACTCAGTAGCTACTGCATCATCGGGTAGTGATGATCAGTCTTCGCCATCAACATCGAATTCTATTCCCTCAAATTCCGTACAATCTCCTTCAACGAAATCTTCTAAAAACACAATCACCGTACTGAGTGAtgttcaattgaatttaaatgaatatcTAGACTTGGTGGGAAATATAATTGCTTCAAGTAAAGTAGCAGCTCAACGCAAAACATTAGCTTCAATAGCTCCCATGCCTTtagtaaaaattgaaaaagaagagCCCATTGATGAGTACATTACGACGTATCCATCGTCTGCAAATACAAACTTTGAAATAGTACCACCACCTTTAAAGGCCAACAAACATGAGACTGAAGAAACAACTGATAAccatagcagtagtagtagttatATTGAAACAAGTAATCGTAATATaagtttaataaatgaaataaaacaagacGAAAAGGATGAGAAAAAACCTCAGGTTCTCGAGAATATCACCGGAAATGAAACTGCTCTATCCTCTTTCGTCAATTCGAACGCCTCAGCTAGCTCAACGACTATAAATTCCAGTCATGTCACCAGTGTTATTCGAATGGCCTCAACTAGTCAACATCAagcccaacaacaacaattgcaatctttagaaaataataaaaattccaacgAAGCTGAAGATCTTTCACAACCCCAAAATAAAGTTCAACCTATGACCAACGCTAAACCGATGGGTCAACCGCCCTTGGCACGCAAAGGTCCTAAGAAACTAGTTATTAAACCAAAATCTTCAAAGACTGAAGCTTTgccaagagaaaataaacaacacCAAAATATAAACGACAATGATCAGCAATTACCAACAACATCCGCTAGGGCAATGCAAGAATCTATAAAACATATTTCAGACGATGCTATTGTACAAGTTAAAAACGAACCAATCGCATCGATAGCCTACGAAAATCAGCAACAAAATCATCAGCCTTTCCAGTCTACAGCAGGATTTAGTATTTTAGAGCAACATCTCAATTCCAAAGAACCCATTCTTGATTTTAAGGAGGAAAAACCATGTTTAACCGAGGGTAGTGTACCAGCTACAGCGatcataaaagaaatgaaagttgAAAATAATGTCAATGATGATGCACGAGTTCTTTACGATTTTGCAAATTCAAAGAAATCTCAAAACGAATCGCCATCTGTTTTTCCATCCTCAATGTCCgttttttcaaatatacaaacttcAACAGGAAATGTTAATGCTAATGCGGtgcaacaaaaaagtaatttaataaaTCATGAAATGGATACTTCGTCATCATCATCCACATATTCGTCACAATCAGCCATAGATGTTACAATTCCCTCTGAAGGGCAGAATGAGagtaccaccaccaccaatacTTCTACCGCAAATGGCCAAAGTCATCAACAAACAAATCCAATATTTACAGATTTTCCTTTTAGTTATCTTTATAATAATATGCCTGGTACCAACGAACAAGTTGACGTAAAAAATCTTCAACAATTTACaacattttatcaaaatggtTCAAATAACAATAGCAGTGGTAacatcaataacaataataacagtagTGCTTTGCTATTGGAAGATTCATCGTCTACCAAACACTACAACGAATATGAACAACAGCATCATCTAAATCATAACCAGGCGCCAGAGCATCAGCAGCCATCGACATCGCATCAGCCGTGGTTTAATAACACAAATTATGCAGCATCTGAACACAATGTTGCTTCAGTTTCAACAAATCATTCGACTGCAAATATAAATTCTTTGTCTGTTGACGGTTCGGCTGCTTTAGATAGCACTGAAGTTGGTAAATACTTAGATTTGGATGCATGTAAACGAGAGCAAAACATTGATATGACCGTTGGCGCGCGTGTTGCTGTACCTCCACCACCGCCACCATCTTCCTCAACATCGTGTTCATTTAATGGGGCCACCGATAATAGTATGGCTGGTATTTGCTCAACAGGTGCAACCTTAAATATTCGAACCGATGAAAAAATGCCAGCTAAAGGAGAAATTTCTGAACAAGAAAGTAATTGTGATATTGATAATTCTTGGAGTCAACCGATGTATGGTGATATATCAGCgagattttttaaaacaacatttcCTGGTATTTTCCCACAAGACAATGGATGGAATCATGATGAATACTTTACCGTACATGATTTGAGTGCATCAACGACGGCTCAAGCCactaatagcaatagcaatattCGATCAAAAAgttTTGAACCTAATAGCAGCACGAACAACAGTTGTAGTATGGCGATATTTTCCCAAAATACAAATGACAACTGTAATATGGATGTTATGCCTTCAACATCGGCAAAAATACGTAAGAGACGTAAACGTAGCTCACAAGATAACAAAACATTGCAAGGAAATGCAAAACGTATGCACCCAACATCCACTGTGACTTCTCAACATATATTGATGCAAAACGCAAATGACATGCCGGGTGTGGAGTTTAATTttcatcaacagcaacagcaacagcagcaaatgCAACTACAACAGCAACCGCATCTTCAACAACCCAGTACTTCAACAGCATTCTTGGCGGGACCATCGAATGCTGCTAATACTTCCCTGACATCGAATTTTATGAtaccacaacaacagcaacaaccacaTCAAGTCCAAAAccagatacaacaaaaacaacgtaCAAAAGTATACGAATGTGGTCATTGCAATGCAAAATATTCGAAACTTAAAGATCGTAATGCTCATATGGTGGATGCCCATAATTACGTACGGCAAAATAGAAGATTAATATGTCCCACAACCGGTCTTGCTACGCCTGTTACAAATTCCGATGTGCAAGATGTGCCCGTACCGACAACTAGCGCAGCCAGTGGAAACTTAATGGCTTCGATACAACAAAATACCGACTGTATGGGTGACTATAAGCAGAGCATAGTCAAAATCGAAACCGAAAATATTCACCGAGATCTAAATTGCGTAGAACCCATCAGTGCTAACTTAAGTGCAAAGACGGAAATAATTGAAGATAACAAAGAACAATTAGCTCTGATACCGTTAAATACAGAAAATTCCATAAATAATAATCTACAGTGCGATACGAAGCCATCTACAAATGGATTACCGTTATCATTAACAACATCCACCAGTAAATTAACAACACTTTATCGTATGTTAGTATCCTTTAATATgacaacattaaaacaaaaccaaagccTTACCGAATTCGACGAGAACCTCATAAAATCGTCGATATTCTTCTGTTACATATGTCGACTAAACTTCAATTCGGTTAAATTATACGATGCTCATTTGACGGAACATCCGGCTGAATGTTTTACGTGTGGAAAGAAATTCCAACGGTGGAAAAACTTCTCACTACACTTGAAACGCCATTTGGGTTGGAAAGAATTTGGATGTACCGTGTGCGATAAGAAATTTGTTGTACGTAGCGCTCTAGTAGAACACACGCGAATGCATTCAGGTCTTTCACCATTAAAATGTAAAGTTTGCGGAAAACACTTTAAACGCTACTCAAACTTAACACAACATCGTAAACGGCatacaaaacaaattgttcGCAGGAAAGAGTATGTTTGTTACTGTGGTGAGGTTCTGCCATCTAAAGCACGATTTTTGTGGCATAAAGAAACGCACGATTCTAAGCCAAAATGTTGTCCACATTGTTGTGATCGTTTCGTGCACGTTAATTCACTGAGGCGACATATTCGTCTTGCACATTCGGATAAATTCGATTATACCGAACCAATGGAGTGTCCCAtctgtaaacaaatatttgcaaaagcTTCTATGAAAGCTCACATGGCCACGCATTCCACAGAAACGCAGTACGATTGTGTTATTTGCAGCAAGTCTTTCTCaacaaaatggaatttaaaaattcactcTTGGGTACATGCGAATCGCACATCTAAACCGTTTAAATGTGAACACTGCCCCAAGGCATTTGTGCGCGAAGTTGACTTCAAGAACCACATGAACTCTCACAAGCAAATCAAACCGTACACCTGTGAGGTATGTGGTTGCAAGTTTATACGCAAATACAATTATATGCGCCACAGAAGGGAGCATCatggcaacaaaaaatatacctgTGATTTATGCAAAAAGTCGTTCCATCGCCACTATTATCTCATAGAACATAGACGCATACATACCGGCGAACGACCATTTCAATGCACGATTTGTGGTAAAAGTTCAACAACTAAAACCAATCACAACAAACACTTAAAGATTCACCATTCTCGAGATCCATTTACTGTGGAAGTATAA
Protein Sequence: MTENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISSGSGVGKGNASLASVLGVETNGTANETKKSNREKEEKPLPPNLKDKELNAGIGVQSCSAGTTISTSNSSSLKHNGSKNSDNILNFSTTNSEGNNEIEHLRKDHSPPSLLAKASVKAEVNSIVKDHSVGSNENVNECFTKNTFSLSNASSNSTTITSHSYHQAPVELTNSNSIHNSFSVFSGNQRYDQQQQRNSTNNQNQIHTTPRMPPPPPPPTSQSQLQDINRGILPSGPSGTFQSIQPQQLTHSPLPPHHLNTTPSNSSHRQQQMFVGQHQTSSNSQHQQNLKVIYAPTLPPPPPLQLFTYQPPTHLQHHQKPPPAYGTAISQIRSQNNQNKHQVTGSSAAHQQHQTLQAHIALQQQQVQNLHQQQNLHHNVRIHVPPPPSPIPTPVKLSYSTKNQELPAQHHVATVRHNHQQQHQPHQNKTVLSQQQQQQPQQPQQQQQNNNENIQNSKNHVINSNEILNKSTKSGSSTSAGAGTSATTVNNANAPSHPHVSISPSTASASMAAVAASTLVRHTNSPFAALLAAAAGAPSPSTSSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDEEDDDDSGRDQMESSVDNESTDIKSKKQEVSQDSDNEKMKQNTVENHKKIQNSLDDNCKMSNHSDPHQPGANEIVDFVSISSDSGDEEEFISQDRKDHSTTESSAKIQPSTTPSSTSQTTLSLLSSSSYSVATASSGSDDQSSPSTSNSIPSNSVQSPSTKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAQRKTLASIAPMPLVKIEKEEPIDEYITTYPSSANTNFEIVPPPLKANKHETEETTDNHSSSSSYIETSNRNISLINEIKQDEKDEKKPQVLENITGNETALSSFVNSNASASSTTINSSHVTSVIRMASTSQHQAQQQQLQSLENNKNSNEAEDLSQPQNKVQPMTNAKPMGQPPLARKGPKKLVIKPKSSKTEALPRENKQHQNINDNDQQLPTTSARAMQESIKHISDDAIVQVKNEPIASIAYENQQQNHQPFQSTAGFSILEQHLNSKEPILDFKEEKPCLTEGSVPATAIIKEMKVENNVNDDARVLYDFANSKKSQNESPSVFPSSMSVFSNIQTSTGNVNANAVQQKSNLINHEMDTSSSSSTYSSQSAIDVTIPSEGQNESTTTTNTSTANGQSHQQTNPIFTDFPFSYLYNNMPGTNEQVDVKNLQQFTTFYQNGSNNNSSGNINNNNNSSALLLEDSSSTKHYNEYEQQHHLNHNQAPEHQQPSTSHQPWFNNTNYAASEHNVASVSTNHSTANINSLSVDGSAALDSTEVGKYLDLDACKREQNIDMTVGARVAVPPPPPPSSSTSCSFNGATDNSMAGICSTGATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNHDEYFTVHDLSASTTAQATNSNSNIRSKSFEPNSSTNNSCSMAIFSQNTNDNCNMDVMPSTSAKIRKRRKRSSQDNKTLQGNAKRMHPTSTVTSQHILMQNANDMPGVEFNFHQQQQQQQQMQLQQQPHLQQPSTSTAFLAGPSNAANTSLTSNFMIPQQQQQPHQVQNQIQQKQRTKVYECGHCNAKYSKLKDRNAHMVDAHNYVRQNRRLICPTTGLATPVTNSDVQDVPVPTTSAASGNLMASIQQNTDCMGDYKQSIVKIETENIHRDLNCVEPISANLSAKTEIIEDNKEQLALIPLNTENSINNNLQCDTKPSTNGLPLSLTTSTSKLTTLYRMLVSFNMTTLKQNQSLTEFDENLIKSSIFFCYICRLNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHTRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKQIVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHMATHSTETQYDCVICSKSFSTKWNLKIHSWVHANRTSKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01315038;
90% Identity: iTF_01315828;
80% Identity: -