Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: zfh1
Assembly: GCA_958299815.1
Location: OY283150.1:54020586-54026684[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00015 0.016 16.7 0.7 1 23 196 218 196 218 0.95

2 15 0.051 5.3 8.7 1.2 3 23 226 246 224 246 0.95

3 15 0.00027 0.028 15.9 0.5 1 23 422 444 422 444 0.98

4 15 0.00087 0.091 14.3 0.6 1 23 450 472 450 472 0.99

5 15 0.0012 0.13 13.8 4.8 1 21 504 524 504 526 0.93

6 15 0.013 1.4 10.6 0.3 1 23 547 569 547 569 0.94

7 15 0.02 2.1 10.0 0.4 1 23 575 598 575 598 0.97

8 15 0.41 43 5.9 0.4 5 19 609 623 606 624 0.91

9 15 0.00025 0.026 16.0 5.6 1 23 633 655 633 655 0.97

10 15 0.055 5.8 8.6 1.7 2 23 661 682 660 682 0.97

11 15 7.7e-05 0.0081 17.6 0.2 1 23 691 713 691 713 0.98

12 15 0.0073 0.77 11.4 0.2 3 23 721 741 719 741 0.97

13 15 8.7e-05 0.0092 17.4 0.5 1 23 747 769 747 770 0.95

14 15 0.0025 0.27 12.8 0.0 1 23 780 802 780 802 0.97

15 15 1.1 1.2e+02 4.5 0.2 1 20 1396 1415 1396 1418 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00015	0.016	16.7	0.7	1	23	196	218	196	218	0.95
2	15	0.051	5.3	8.7	1.2	3	23	226	246	224	246	0.95
3	15	0.00027	0.028	15.9	0.5	1	23	422	444	422	444	0.98
4	15	0.00087	0.091	14.3	0.6	1	23	450	472	450	472	0.99
5	15	0.0012	0.13	13.8	4.8	1	21	504	524	504	526	0.93
6	15	0.013	1.4	10.6	0.3	1	23	547	569	547	569	0.94
7	15	0.02	2.1	10.0	0.4	1	23	575	598	575	598	0.97
8	15	0.41	43	5.9	0.4	5	19	609	623	606	624	0.91
9	15	0.00025	0.026	16.0	5.6	1	23	633	655	633	655	0.97
10	15	0.055	5.8	8.6	1.7	2	23	661	682	660	682	0.97
11	15	7.7e-05	0.0081	17.6	0.2	1	23	691	713	691	713	0.98
12	15	0.0073	0.77	11.4	0.2	3	23	721	741	719	741	0.97
13	15	8.7e-05	0.0092	17.4	0.5	1	23	747	769	747	770	0.95
14	15	0.0025	0.27	12.8	0.0	1	23	780	802	780	802	0.97
15	15	1.1	1.2e+02	4.5	0.2	1	20	1396	1415	1396	1418	0.93

Sequence Information

Coding Sequence: ATGGATAATCATGGCTATGGTGGCATACAGTGGATACAACACCACTCTGTTAATCATTCAGGTGATATGAAAACAGCTGGCCAGTTATTGATAGACCCTCAACCACCCCGGGCGGAAGATTTAATGGCCAGTGCCAATTCCTCTTCGTCGTATATGGCGACAGAAGACGATGAGGCAGACTCGGCTACTATTGATCAAATTGCGGCcgaaaatcttatttttatgGCCCGTGATGGACAAATGGTTACTGAAATCATAACAAATGCTACGACAGACAAGGATGGAAATGTGGTTGTGACTGCCAGCGATGGCGAACAGATCGATTGCGATGCCATTATGGAACAGGCTGCCTTAATACAACAGCATGAAGATGCTGGTGGTGGTGTTTATAGTGTAGAACACTTCTCAGAAAATACACCGCAAATGGTAACAGAGGAAGTGATCACTGATGATTGGGTTCAGCATCAAGGCGAAGAGAGAGTTGAAATATCTGCCGAACAAATAATTGGCTCCAGTTCTCAGGTGCTACTCGATATTGAAGTACCCCTGCCAACTGTACAAGATGAATACACTGCCCTACGACCATATCCTTGTGACTTTTGTAGTCGGCGATTTCGAAAAAAGGCCAGTCTAATGAATCATATGGTTGCACATCAAACAGATCGACCGCATTTGTGTAAATTATGTGGAGCAAGATTTCTGCGGAGACAAGATCTAATTAATCATTTAAAGGGACATGCAGAGGAGCCAGTCGATGATAGTGATTtTATACATTTTGTTAACGATACAAGATCCTCATCACAACGTACTTCCAATGATCATTATTATGATCAGGATTGGATTGTACCTGAAGATTCAGTAACTATACCAACAAAATCTAGTCGcaaacagcaacaaatacaacaGCAGGAACAACATATTACCTCTTTAGCTAATCAACAAATCATAATGGATAACTCCATGACATCAAATGTCACCACAACAGCGTCAGACAGTCTACGTACACAAACTGCAACCAGTGCCCCGCCCAGAGGTCGCATAAGTCGTCTTAAGCCCAAAGAAGACTCATATGTGGTGGAAGTACAAAATAATTGTTCCACCAGTGATATGATTATTTCGTCAGCGTATAGCATTGTAGAGTGCGATACATTATCCGCCAACACAGCTACTGTAAAACTTACTCAGGATAGTACAAACGCCTTACAGACCTCAAACGAACAACCAAATGTCCTACACTATCCCGTTATTGATGACAGTAAGCCATTTGTATGCCAACAATGTGGTCTAGCATTTTCCAGGGAGAAGGCCATGCTATCACATACGAAGacacATAGAAACGACTTGCCCTATGAGTGCTCTCAATGCAATGAACTGTTTTGGGACCAGTCCAGCCTACAAGACCATCAGAAAACGCATCAGTTTGAGGAAAGTAATTCGGAATATGATCCAAATGAAGGCGAAGATGAAACCCAAACTGAATCTGAATCCGAACAGCAATTGTATGGTGAATTTTATTGCAGTGAGTGCGGCATGTCTTTTCATCGTCAGGATCTGTTAAAGAGACATGCCAAATGCCATGCGAAAGAAAACTCTACCGGGCACTCCAACAACACTAATGGCTTAGTGGCTAAAGATCAACATTGTTGCAATACTTGTGGTGAAACATTTGCTGAAGCTTTAGATTTGTTGGCCCATGCCGAAATACATGCTCGCTACCCGCCTTTTAAATGTGTCTTATGCGGTGAATCCTTCTTTGAGGAGCCCACCATTAAAAAACACCTCCAGTCACAACACTCAAATGAGCTGACAGAAAACTCTTGCATCTTGTGCGGCAAAGAGTGTCGCGATCGCAAAGCTTTAATGAAACATGCCTGGGATCATTCTCGAGAGAAATGCCACTCCTGTTCGAAATGTGGTAAAAACTTTCACAATAAGGCACGTCTCAAAAGGCACATGGCTTCTCATCGCGACAAGTCTGTACAATGTGATGTCTGCCACGAAGAATTTCCCGATGGTCGTACGTTATCGAATCATCGTCATTCTCATAGCGCGACCTCAGCGGGAAAACTATTTCCCTGTCTGGAATGTGGCAAAACGTTTGGCTCGCGTAGTTCACAACAAATCCATGTACGCATACACACTGGAGAACGCCCTTATGGTTGTCGGTTTTGTTGGAAAGCTTTTGCCGATGGTGGCACTCTACGGAAACATGAGCGTATTCACACTGGTGAAAAGCCATATGCTTGTTCTGTATGCCCACGAGCTTTTAATCAACGCGTAGTATTGCGAGAACACATCAGATCACATCACTCAGGTTTGGATGCGAAGAGGGGTACTTACTATTGTACGGTATGCGGAGCTGAGCTGTCTTCATCGGGCGATTTGATACAACATTTAATACAGCACAGTGATATGAATACCGCCATGCAGAGGCAACCGGTGACTGGGCCACGGAAATATAAACGTCGTCGTAAATTGAAGCCCCATGAACTTGCCCGTCTAAAAcgtgaatgtaaacaaaatggtGGTAATGGTAGTGATATTGATTTATCCGATTTTGATATGGACAATGTTGATGATCTGTTAGCCATAACGACTGACAGCAATACTGCCACAGAAATACAAACAACCACCACTGATGATTTACAAGGCAAATCTACGAAACGTAAAAGTGCCTCTGCCTCGTCTACTCATAGTGAACACCATAacaatagtaaaacaaaaaccagcAATCATAAGGGAAAATCACATCTGCTGGAAGATTTCGATTTAGATGTAGAGCTGGACGATGATACAATGAAAAAACAGCGTTTTAATTCCACTAGCAGCGATAAAATCTGGCCATCTAAACAGACTGAGGATACATATAAATCATTGCTATCAAATCTGGAGACGACACTACAAAGTATCGACACTTTAGTTGTGGAACCTTCAACGAGAACCTCAAATAATCGAAAAACCGATGTACAAGCACATGATCGCACTCAAACCAAACGTAGGCCAAAACAAGAATCCGCGCCTACAGCACAAAGGACACAACAGGTTCGATTGAGTAGAGGTAGTGATGGGGGTGGAGGTGAAAAAGAAACACGTTGTCCAACTGGCCAGACAAGAGGTCGAAAAAGTAAAAATGCTGCAAAACAAGCTAAAAGACCTCAAATGATACACACAGAAAAGGCAACGTCCGAGAGTTGTGCTAGCAGCGGTGGAGGATTAGGTGGtagtagtaaaaagaaatccaaatcAATTATTAGTCGTACGCAAAGTActaatattgatatattgacGAAAACTTCGACCATAGTGGATGATTACGATATTATATCGCCTGCCTCACATCCTCCCAAACAGATAAGTTCTAGTCCTTTGCATATTAAACAGGAACAAGACACTCGTTATTACCAGCAGCTGCACGGTCATCATCAGCTGCAAAATCCGCAGCAtaatcatttaataaaaaatccccCAAACACTAATCATAACACTTCAGCACGTACGCAATCAACTACCCGCCATACAAACGCTAATGATCTCTACGATGCTCATCTATTATTAGAGGCTTCGGGACTACGTAATGATCTGGATGAAATTCTACGATCACCTTTAAAAGCCGATAAATTACGGCAACGCTTTACGAGCGAATCTTCTACACAATTTTTGACTGAACAATCGGAAGAAGAACAACATTTGATCAAAATTGAACCCACATCTCCCGATCTCAGAGAAATTGTTAATGGTGCCAGTTCGGTTAATGCTAACGCTGCCGAATTAGAGGTTACAAGCAAAACTCGTAGATCTAACAAAAGCTCGCGATctaagagaacaattaatacggATTGCAAATACATAGAGTTCACCAGCGACATAACAAGCTCTGAACAGACTAATAATATAAGCAGGAGATCTCAAATGAATTCGCATAACACATCGGCAACAAAACCTTCCAAATCTGCTCGCACCGAACCAGCCAAAGCATTGAAATCTATACAGAACTCTAATGCAGCCGCTGCTTCATCGTATTTAGATTATACTACCATGGTGGATACTTTTAGTACGGTAACAAGTTCCTCAACTAATAACAACAGCTCGTTTGCATCCATTTCAGCTGTGGTCTCGGCTGCCGATGCCTCTGCTGCAGCCCAGCAACAAAACTCCTCTTCGGCTAACCGCAAACCCCAACGCTATTTCGAATGTGAAATGTGTTGCGCTATATTCTCGGATCGTGCTCAACTGTTGGATCATGTGCCCATAcacatttaa
Protein Sequence: MDNHGYGGIQWIQHHSVNHSGDMKTAGQLLIDPQPPRAEDLMASANSSSSYMATEDDEADSATIDQIAAENLIFMARDGQMVTEIITNATTDKDGNVVVTASDGEQIDCDAIMEQAALIQQHEDAGGGVYSVEHFSENTPQMVTEEVITDDWVQHQGEERVEISAEQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPVDDSDFIHFVNDTRSSSQRTSNDHYYDQDWIVPEDSVTIPTKSSRKQQQIQQQEQHITSLANQQIIMDNSMTSNVTTTASDSLRTQTATSAPPRGRISRLKPKEDSYVVEVQNNCSTSDMIISSAYSIVECDTLSANTATVKLTQDSTNALQTSNEQPNVLHYPVIDDSKPFVCQQCGLAFSREKAMLSHTKTHRNDLPYECSQCNELFWDQSSLQDHQKTHQFEESNSEYDPNEGEDETQTESESEQQLYGEFYCSECGMSFHRQDLLKRHAKCHAKENSTGHSNNTNGLVAKDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEEPTIKKHLQSQHSNELTENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAKRGTYYCTVCGAELSSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHELARLKRECKQNGGNGSDIDLSDFDMDNVDDLLAITTDSNTATEIQTTTTDDLQGKSTKRKSASASSTHSEHHNNSKTKTSNHKGKSHLLEDFDLDVELDDDTMKKQRFNSTSSDKIWPSKQTEDTYKSLLSNLETTLQSIDTLVVEPSTRTSNNRKTDVQAHDRTQTKRRPKQESAPTAQRTQQVRLSRGSDGGGGEKETRCPTGQTRGRKSKNAAKQAKRPQMIHTEKATSESCASSGGGLGGSSKKKSKSIISRTQSTNIDILTKTSTIVDDYDIISPASHPPKQISSSPLHIKQEQDTRYYQQLHGHHQLQNPQHNHLIKNPPNTNHNTSARTQSTTRHTNANDLYDAHLLLEASGLRNDLDEILRSPLKADKLRQRFTSESSTQFLTEQSEEEQHLIKIEPTSPDLREIVNGASSVNANAAELEVTSKTRRSNKSSRSKRTINTDCKYIEFTSDITSSEQTNNISRRSQMNSHNTSATKPSKSARTEPAKALKSIQNSNAAAASSYLDYTTMVDTFSTVTSSSTNNNSSFASISAVVSAADASAAAQQQNSSSANRKPQRYFECEMCCAIFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01313172;
90% Identity: iTF_01314853; iTF_01315699; iTF_01313172;
80% Identity: -