Basic Information

Insect: Sarcophaga carnaria
Gene Symbol: su(Hw)_1
Assembly: GCA_958299815.1
Location: OY283150.1:9327662-9337405[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 5.8e-05 0.0061 18.0 0.8 2 23 77 99 76 99 0.94

2 22 0.17 18 7.1 0.5 1 23 105 127 105 127 0.93

3 22 0.00061 0.064 14.8 0.9 1 21 134 154 134 155 0.94

4 22 0.0012 0.13 13.8 0.6 2 22 165 185 164 185 0.94

5 22 1.8e-05 0.0019 19.5 2.9 3 23 199 219 198 219 0.97

6 22 0.00047 0.049 15.1 0.5 1 23 225 247 225 247 0.97

7 22 0.00017 0.018 16.5 0.9 1 23 253 275 253 275 0.98

8 22 2.8e-06 0.0003 22.1 1.0 1 23 281 303 281 303 0.97

9 22 0.00093 0.098 14.2 2.0 3 23 309 330 307 330 0.96

10 22 0.049 5.2 8.8 0.9 2 21 332 351 331 352 0.96

11 22 0.0069 0.73 11.4 1.6 1 20 1204 1223 1204 1224 0.95

12 22 1.8e-05 0.0019 19.6 0.4 3 23 1276 1297 1274 1297 0.93

13 22 0.05 5.3 8.7 0.1 1 23 1303 1325 1303 1325 0.95

14 22 7.9e-06 0.00083 20.7 2.2 1 21 1332 1352 1332 1353 0.95

15 22 2.4e-05 0.0025 19.2 1.6 2 23 1365 1386 1364 1386 0.96

16 22 1.3e-05 0.0014 20.0 4.7 1 23 1397 1419 1397 1419 0.99

17 22 0.00018 0.019 16.4 0.8 1 23 1425 1447 1425 1447 0.97

18 22 3.8e-05 0.004 18.5 1.0 1 23 1453 1475 1453 1475 0.99

19 22 3.8e-06 0.00041 21.7 1.3 1 23 1481 1503 1481 1503 0.98

20 22 6.6e-05 0.007 17.8 1.9 1 23 1507 1529 1507 1529 0.97

21 22 0.035 3.7 9.2 0.7 2 22 1550 1570 1550 1573 0.91

22 22 5.9 6.2e+02 2.2 0.2 3 23 1588 1609 1586 1609 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	5.8e-05	0.0061	18.0	0.8	2	23	77	99	76	99	0.94
2	22	0.17	18	7.1	0.5	1	23	105	127	105	127	0.93
3	22	0.00061	0.064	14.8	0.9	1	21	134	154	134	155	0.94
4	22	0.0012	0.13	13.8	0.6	2	22	165	185	164	185	0.94
5	22	1.8e-05	0.0019	19.5	2.9	3	23	199	219	198	219	0.97
6	22	0.00047	0.049	15.1	0.5	1	23	225	247	225	247	0.97
7	22	0.00017	0.018	16.5	0.9	1	23	253	275	253	275	0.98
8	22	2.8e-06	0.0003	22.1	1.0	1	23	281	303	281	303	0.97
9	22	0.00093	0.098	14.2	2.0	3	23	309	330	307	330	0.96
10	22	0.049	5.2	8.8	0.9	2	21	332	351	331	352	0.96
11	22	0.0069	0.73	11.4	1.6	1	20	1204	1223	1204	1224	0.95
12	22	1.8e-05	0.0019	19.6	0.4	3	23	1276	1297	1274	1297	0.93
13	22	0.05	5.3	8.7	0.1	1	23	1303	1325	1303	1325	0.95
14	22	7.9e-06	0.00083	20.7	2.2	1	21	1332	1352	1332	1353	0.95
15	22	2.4e-05	0.0025	19.2	1.6	2	23	1365	1386	1364	1386	0.96
16	22	1.3e-05	0.0014	20.0	4.7	1	23	1397	1419	1397	1419	0.99
17	22	0.00018	0.019	16.4	0.8	1	23	1425	1447	1425	1447	0.97
18	22	3.8e-05	0.004	18.5	1.0	1	23	1453	1475	1453	1475	0.99
19	22	3.8e-06	0.00041	21.7	1.3	1	23	1481	1503	1481	1503	0.98
20	22	6.6e-05	0.007	17.8	1.9	1	23	1507	1529	1507	1529	0.97
21	22	0.035	3.7	9.2	0.7	2	22	1550	1570	1550	1573	0.91
22	22	5.9	6.2e+02	2.2	0.2	3	23	1588	1609	1586	1609	0.93

Sequence Information

Coding Sequence: ATGAAGGGACAAAAGAACTCTCACACTAGAGAGGAGAAAAGCGAAGAAATAGACATTATTTTGGCCAATAATGAAAAAGGCAAACTAATGAGCGAAGACACAGAGGAACCAGATCTCAGTGATGATGATAATCATGATTTATCTAATACGGGTTCAACAGAAAAGATTGCCCAACATGTTTGTGGAAAGTGTCACAAAACTTTCTGGACAATTAGTTTTGGCCAGATTAAGTGCTCTGATTGtccaaaatcatttaaaactcAATTGAGCTATGAACGTCATATATTTATAACTCATGCGGAGTTCGATGATCATTCCTGTAGTATATGCGATGCAAAACTGCGTAGTGCTAATCTATTGAAATTGCACGAAGACCAGCATCGTAATCGAAGCAAACCCTTTGCCTGCGAGTTATGTGGTAAACAGTTTACTCGATCGAATCACGTGATATCTCATCAGAAATACTCATCTTGTTCGGCTACTGCTGTTATAGAATGCAAATATTGCAATAAATCCTTTCAACGTATAGGTAAATTACGAGATCACTTAAAACGACAATTATGTTCTCAAACTCGTAATAAATCGGAAAATATGTGTCCAGTGTGCAAGAAATGTTTCCAAAATTCACGTAATTTAAAagttCATTTACGCATACATACGGGTGAAAGACCTTTTGACTGCGatttatgtacaaaaaaattcCGTGTACTAGCAGCTTTAGAAAGCCATAGACGTTCCCACACTGGAGAAAAGCCCTATTCCTGCTCTGTGTGTAAGCAATCATTTGTTGCAAAGGAGGTATTAAATCGCCACATGAAACGTCATACTGGTGAAAAACCTCATGTCTGCAGTGAATGCGGCAAAGGTTTTATACGTCCATCGCAACTTCGTTCTCATACTAAGCTACATATAAAACCTTACGGATGtgataaatgtaataagaaattcgGAACTAAGAAAAAACTGCAGAGCCATGTCAACAAACTGcataataaatgtaaaacatgtaaaattcgttttaaaacCGAACTAGAGTACAATGACCACATGAAGGAAAATGCTGACTGCGcaaTAGCCGAACGTCGCAAACGCAAAAAACGCACTAATAAACATAACTCCGATTCAGTACAAAGCTCAGAATTCCATATACTTAAGGCTAATCAAAGAGACACTGAAATATTCGTTAATGAAAATCCTTCCAATAATTGTATGAATAATACTGTATCAAATTCTTCACCAgaagttattaaaattcaagATTCTCAAGGTGAAAGTTTTGTTACACTCAAAAGTAAAGgtaaaatattaaacaccaACGTAAAAGACCGAGAACAGCAACATGTGCTGAAAAGTGGCGATAACGATCATGGGTACCCTCACACTTCAGCTGTTGGTGCAAAATCTACCATTTTTCTGTCCAATGAAGAATCAATTACTGTAATTTCTTTGGAATCGGGTGATGATATGGTAGAGcaagcaaatacaaaaactttGCCCAATAATAAAGGTAAAATATTGAACACCAATACAGAAGACCTAAAACAGCAACATGTGCTAAAAACTggcgataaaaaaaaacttaagaacaACAGTGTTGGCATTTTAGATCAGGGGCACCCTCACACTTCAGCTGTTGGTGCAAAATCTACCAATTTTCTATCCAATGAAGAATCAATTACTGTAATTTCTTTGGAATCGGATGATGACATGGTAgagcaaataaatacaaaaactttgCCCAATAGTAAAGGTAAAATATTGAACACCAATATAGATGACCTAGAGCAGCAACATGTGCTGAAAACTGGCGATAGCGATCAAGGGTACCCTCAAACTTCAGCTGTTGGTGCAAAATCTACCGTTTTTCTATCCAATGAAGAATCAATTACTGTAATTTCTTTGGAATCGGATGATGATATGGTAgagcaaacaaatacaaaaactttgCCCAATAGTAAAGGTAAAATATTGAACACCAATATAGAAGACCTAAAACAGCAACATGTGCTGAAAACTGGCAATAACGAAAAACTTAAGAACAACAATGTTGGCATTTTAGATCAGGGATACTCTCACACTTCAGCTGTTGGTGCAAAATCTACTAATTTTCTATCCAATGAAGAATCAATTACTGTAATTTCTTTGGAATCGGATGATGATATGGTAGAGCAAGTGAATACAAAAACTTTGCCCAATAATAAAGGTAAAATATTGAACACCAATATAGAAGACCTAAAACAGCAACATGTGCTGAAAACTGGCAATAACGCAAAACTTAAGAACAACAATGTTGGCATTTTAGATCAAGGGTACCCTAAAACTTCAGCTGTTTGTGCAAAATCTACAATTTTTCTGTCCAATGAAGAATCAACTACTGTAATTTCTTTGGAATCGGGTGATGATATGGTAGaggaaacaaatacaaaaactttgCCCAATAGTAAAGGTAAAATATTGAACACCAATATAGAAGACCTAAAACAGCAACATGTGCTAAAAACTggcgataaaaaaaaacttaagaacaACAGTGTTGGCATTTTAGATCAGGGAAACCCTCACACTTCAGCTGTTTGTGCAAAATCTACCATTTTTCTGTCCAATGAAGAATCAACTACTGTAATTTCTTTGGAATCGGGTGATGATATGGTAgagcaaacaaatacaaaaactttgCCCAATAGTAAAGGTAAAATATTGAACACCAATATAGAAGACCTAAAACAGCAACATGTGCTGAAAACTGGCAATAACGCAAAACTTAAGAACAGCAATGTTGGCATTTTAGATCAGGGAAACCCTCACACTTCAGCTGTTGGTGCAAAATCTACCAATTTTCTATCCAATGAAGAATCAATCACTGCAATTTCTTTGAAATCGGATGATGATATGGTGgagcaaataaatacaaaaactcctgaatcaaaaatgaaaaaaaattcgactTTAGCTGCTGCTATTGCCGATGATAAAATATTACAGACTGAGGTGGAGCCAACACATTCCGAAGAggatttaaaacttaaatgcaATGTTCGTAAACTATTAGACAAGTTGGTAGACAGTGCAACTCTAAAACGATTTGGTTGGCCAAACATTACTGAAGATATTatTCTTtgtaaacttattaaaaattgcgGCTATGACTTGACCAAACAGCAGCATAAATTTAGTAGTTTTGATTACGCTACTCGTATGCGCaaatatgttaaattatttttaactgttGTCATACAGAACGAATTTGTAGAAGAGCTACTAAATAACGATCTAATTGATGAAGTTATTGAATATGTTTTGGACATTGATATATACATAATAACACCTACGCCAGCTGTGACCTCGGTTCCACTATCTCCACCAAAACAAATGACATTGTCCATAGCCAAACCCAAAGTGTTGAAGCAAAAGAACATGGATCACTATGTTATGAAGACGGTTAAGGGAGAGAAACACACCGATACAGGGGTGGAAGAGAGCGAAACAATTGATTTTATATTGGCCGATAACGAAGAGGATGGAGAAGGAAAGCCATCAGGTGAAATTACCGAGGAATTACATCTCagtgatgacgatgatgatatcGGTTCAACTCAAGAAATTGTTGAGCATGTCTGCGGTAAATGTTTTAAGACTTTCCGTAAAATCAATagTTTAAAAAAACATATAGACTTTTGCCGTTTCGATAGCAGCTATCATCTTCGAAAAgcggaaatgttaaaaaacttggagaaaattgaaaaggatgCAGTTATAATGGAGAATAAGGACGTCTGTTTTTGTTGTGGCGAAAGTTACGATACATTTCACttggGTCACATTAATTGTCCCGATTGCCCGAAATCCTTTAAAACTCAAATGAGCTATGAACGTCATATATTTATAACTCATTCCGAATTCGATGATTATCCTTGTAGTATATGCAATGCTAAACTGCGTAGTGCTAATCTATTGAAAATACACGAAGAACAACATCGCAGTCGAGGTAAACCCTTTGCTTGCAAGATATGTGGCAAAGATTTTACACGATCGTATCATTTGAGTCGTCATCAAAAATTTTCATCTTGTTCGGCAAATGAAAGCGATTCTATACATTGTAAAGTTTGTGACAAGGCTTTTTATAGATTGGATAATTTGCGTGTACATTTAAAGCAACATTTTGGAGCTCAAACTGCCAAGAAATCAGAGTATACATGTCCCACATGTAAGAAATGTTTCTACAGTTTATCAACGTTAAACATTCATACCCGCACACATACGGGTGAAAGACCATTTGATTGTGACTTATGTGAGAAAAAGTTTCCTTCGTTGGTGGCATTAAAAAAACACAGACGTTATCATACAGGAGAAAAACCTTATACCTGCTCTGTGTGTAAGCAATCCTTTGCTGTAAAGGAGGTATTAAATCGTCACATGAAACGTCATACTGGTGAAAGACCTCATGTATGCAGTGAATGCGGCAAAAGTTTTATACAAGGATCGCAACTTCGCACCCATGTTAAGACACATATAAGACCTCACGAATGTGATGAATGCAATGAGAAATTCAAAACTGAGAAACAACTGGAGCGCCATGTCAAAGAACACAACACAGCAAAGCGAAAAGGCAGTTCTGCACAGAAAAGAGGTCGTGCTCGTTTGGCCAATCGATGTGATACTTGTAAAATCGGTTTTAAAACGGAATTAGAGTACAATAAACACATGAAGGAAAATGTTCATACCACCCCTGCCGAACGGcgcaaaagaaaaaatcgcACAGACTGTGCCGTTTGCAAACTTAATTTCGATACCGTGCAAAGTTTACAATTTCACATACTCAAGGTACATCAAGAAGATCCAGAAACGTTCGTTAACGAAAATCTTTTTGATAATGATACCTTGCTTATGCCACCaccaaaagttattaaaattgaagacGCTCAAGGTCAACGTATTGAATTCGTTACTACCAATAGTGAAggtaaaatattgaataccaatATAAAGGGCTTAAAGGAAGAGCAAATTCTAAAAACAGCTGAAAACACACAAGATGAGAATAACAAAGTCAACATTTTGGAACAGTATATAATTGAAGATAATCCTACGACCTCTGCAAGTGTGGCTCAGCAAACGTTTATACTGTCTAATGAAGCATTTACTGTTATACCGTTAGAATCGGATGGTGGTATCATAGAGCCAATAACAACAAAGACTTTGCCCACCATCATAAATCCGgaaataaagaaagaacaaCGCAAAACTTTGGCTGAGAGCTTAGCTGCTGCCATAGCCGACAATGATGAGGAGTTGTTCGAAaatgaggaggaggaggaggaggtgcCAACATTTACCGAAGAAGATTTAAAACTTAAGGATAATGTTAGTAAATTACTAGACATGTTGGTGGATAGTgcaacacttaagaaatttggttGGCCTGATGTAACCGAAGAAACTGTTCTTtgtaaagttattgaaaattgtGGTCACGATTTAACTAAAGACCAGCACAACTATAAGAACTTGGATTATGCTACACGTATGCGCGAATACGTTAAATTACTCTTCACTGTCGTTATACATAATGATTCGATTAAAGAATTGCTTAACAACTATCCAATCGATGAAGTTATCGAATATGTTTTAGgcaacgatgatgatgacgaagatgaggatgatgataataatgatgataataaaactAATGCTCCCAAGGAAATTAACGATAAAGACAATGATGATACTATTAAACGCGAAAAAGATGcatga
Protein Sequence: MKGQKNSHTREEKSEEIDIILANNEKGKLMSEDTEEPDLSDDDNHDLSNTGSTEKIAQHVCGKCHKTFWTISFGQIKCSDCPKSFKTQLSYERHIFITHAEFDDHSCSICDAKLRSANLLKLHEDQHRNRSKPFACELCGKQFTRSNHVISHQKYSSCSATAVIECKYCNKSFQRIGKLRDHLKRQLCSQTRNKSENMCPVCKKCFQNSRNLKVHLRIHTGERPFDCDLCTKKFRVLAALESHRRSHTGEKPYSCSVCKQSFVAKEVLNRHMKRHTGEKPHVCSECGKGFIRPSQLRSHTKLHIKPYGCDKCNKKFGTKKKLQSHVNKLHNKCKTCKIRFKTELEYNDHMKENADCAIAERRKRKKRTNKHNSDSVQSSEFHILKANQRDTEIFVNENPSNNCMNNTVSNSSPEVIKIQDSQGESFVTLKSKGKILNTNVKDREQQHVLKSGDNDHGYPHTSAVGAKSTIFLSNEESITVISLESGDDMVEQANTKTLPNNKGKILNTNTEDLKQQHVLKTGDKKKLKNNSVGILDQGHPHTSAVGAKSTNFLSNEESITVISLESDDDMVEQINTKTLPNSKGKILNTNIDDLEQQHVLKTGDSDQGYPQTSAVGAKSTVFLSNEESITVISLESDDDMVEQTNTKTLPNSKGKILNTNIEDLKQQHVLKTGNNEKLKNNNVGILDQGYSHTSAVGAKSTNFLSNEESITVISLESDDDMVEQVNTKTLPNNKGKILNTNIEDLKQQHVLKTGNNAKLKNNNVGILDQGYPKTSAVCAKSTIFLSNEESTTVISLESGDDMVEETNTKTLPNSKGKILNTNIEDLKQQHVLKTGDKKKLKNNSVGILDQGNPHTSAVCAKSTIFLSNEESTTVISLESGDDMVEQTNTKTLPNSKGKILNTNIEDLKQQHVLKTGNNAKLKNSNVGILDQGNPHTSAVGAKSTNFLSNEESITAISLKSDDDMVEQINTKTPESKMKKNSTLAAAIADDKILQTEVEPTHSEEDLKLKCNVRKLLDKLVDSATLKRFGWPNITEDIILCKLIKNCGYDLTKQQHKFSSFDYATRMRKYVKLFLTVVIQNEFVEELLNNDLIDEVIEYVLDIDIYIITPTPAVTSVPLSPPKQMTLSIAKPKVLKQKNMDHYVMKTVKGEKHTDTGVEESETIDFILADNEEDGEGKPSGEITEELHLSDDDDDIGSTQEIVEHVCGKCFKTFRKINSLKKHIDFCRFDSSYHLRKAEMLKNLEKIEKDAVIMENKDVCFCCGESYDTFHLGHINCPDCPKSFKTQMSYERHIFITHSEFDDYPCSICNAKLRSANLLKIHEEQHRSRGKPFACKICGKDFTRSYHLSRHQKFSSCSANESDSIHCKVCDKAFYRLDNLRVHLKQHFGAQTAKKSEYTCPTCKKCFYSLSTLNIHTRTHTGERPFDCDLCEKKFPSLVALKKHRRYHTGEKPYTCSVCKQSFAVKEVLNRHMKRHTGERPHVCSECGKSFIQGSQLRTHVKTHIRPHECDECNEKFKTEKQLERHVKEHNTAKRKGSSAQKRGRARLANRCDTCKIGFKTELEYNKHMKENVHTTPAERRKRKNRTDCAVCKLNFDTVQSLQFHILKVHQEDPETFVNENLFDNDTLLMPPPKVIKIEDAQGQRIEFVTTNSEGKILNTNIKGLKEEQILKTAENTQDENNKVNILEQYIIEDNPTTSASVAQQTFILSNEAFTVIPLESDGGIIEPITTKTLPTIINPEIKKEQRKTLAESLAAAIADNDEELFENEEEEEEVPTFTEEDLKLKDNVSKLLDMLVDSATLKKFGWPDVTEETVLCKVIENCGHDLTKDQHNYKNLDYATRMREYVKLLFTVVIHNDSIKELLNNYPIDEVIEYVLGNDDDDEDEDDDNNDDNKTNAPKEINDKDNDDTIKREKDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -