Basic Information

Gene Symbol
Camta1
Assembly
GCA_958299815.1
Location
OY283153.1:46836157-46862280[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.3e-19 5.1e-15 56.3 3.7 33 79 4 49 1 58 0.91
2 4 0.017 6.5e+02 1.1 0.1 106 116 51 61 48 61 0.79
3 4 0.13 4.9e+03 -1.7 0.1 53 89 430 466 417 477 0.81
4 4 0.94 3.6e+04 -4.5 1.1 15 61 574 622 569 629 0.48

Sequence Information

Coding Sequence
ATGGGCTTGCGaccgAAGAGCGGTTCACTTTTATTGTATTCCCGAAAAAAGGTACGTTATCGACGTGATGGCTATTGTTGGAAGAAACGAAAAGATGGCAAAACTACCAGAGAAGATCATATGAAACTTAAAGTACAAGGCACTGAGaatccCGATATCGTTTTGGTACATTATCTAAATGTACCGTATCCGGATGATAATAAAATGGCTGTCATTGCACCCAGCATTAGTTTGTGGGGCGATAAAAAGGAATGGACTAAAGAGGAATTAGTCAGTCAACTTAAGCCAATGcTATCAACTGTGACATCAGACGATGAATCAGACTCCGGCAATGATATTGAAATATCGaCTGCCGAAACTGTTGAATCCATAGTCTGCCAATTAATGGAAAAACAACGTCTTTCACGACAAGCAGCTTTAGTTAAACAATTGGATTGTGGCTGTGGTGATACCTCCTGTGCAGATGGTAAAACGTGTACGCATCCCGTAATGCGGCGACCGAGTTTAATAAAAGCCTCAAATGAAAAACGTTTACCGCCCACAAATGCTGTGGAACCGTATAACACTAACAATACGCCAAATGTTGTTGTAGGACCAAAGTTGTATTCAAGATGGGCGGATAAACGAGCTGCTATACGTGAATCGGCAAATAGTATGGATACGAATGGCTATCAGCATCATGCACAACATCATGGTCATGGGCATCATGGTCAGACACAACAGCTGGCACAGGAGTCGgctattaaatttcaaattataccGCCACACAatgaacaacagcagcaacagcaacattatCGTCACCATTACAGTGCCAATGGTAGTAATTCGTCTTCAACAACTGCTAATCATCAGCAGCAGTTGATAGCAAcgagaaataatttaataatgcaacagcatcaacaacagcagcaacaaatgcATACGAATCAATCAAATTTCAATCAAGTGCATAATcaaaccaacaataacaacaataacagtaatATTATCAACCACAATACTaattcaaataacaacaataataacagtaatATACAACGTTATGCAAATACAACCAATACCAGTATGCAgtcacagcaacaacaacaacaacagcagcagcagcaattacATCGTTTCCaaatagcaaaaacaacaattactgCAATGGATAATAACACAAATAATCAACATAATAATTTGACTTCCGTTTCCACAGCAATTGCGAATAACACCAATAATGTAGGTGGAGAAAATGTTGTCGATATGTTGAATCTACccctacagcaacaacaacagctgcaacagcagcatcatcatcatcatcatcaacatggAATGACTACAACGAATTctaatgcaaataataaaattaaccacAATACAAATATCAATACACAGACCGCAAACcaaaattcacatacaaatcCAATAACAAATTCTATAACACCATCACCATCTTcgtcatcttcttcttcttcttgtttatcatcatcatcaccatcaacgAATTCGAATAGTGTGACAACGACAGTTGCACCACAATTGATGTCAACAcctcaaaatgatttaaatgccataaataataatggcaacatcaataatagcaacaataacaacaacaatagtatgGATATAAGTTGcaatagcaacaatagcaacaacaataatactaattgcaatactaataataacacaacagtagcagcaacaaccacaacaccagcaacaacaacaatatttaataattacaatCAACAGCAATTAAATACTTccaataacagcaataacaataattcaaatcaacaacagcaacagcaaaaatcGAATATACCACAAGAACAATATTATAAATTGCAACATCATAaactacagcaacagcaacaacaacagcaacagcaatcaACCCTTACTTCTTCAActggtgctgctgctgttgctgcctcTTCAACTGTGGAGCCCATGTGCATGTCACCCGAACATCAACCCTCATCTTTATCTAACTCCTCCTCCAGTTGTATGTCACCACAAATTTtgcttaaacaacaacaacagcaacaacaacaacagcaaaagcaaACACATTTAATAATCTCATCTTCGGATTCAATGTCCGAAGCATCATCTACGCTGTCAACGACTTCGTTGTCCTCATCATCGCAAACATTTATGGATTTGAATCAAAAATCTTCTACcttagacaacaacaaaaacaacaataataacaacaacaacaataacgacagTAACCATAACACGAATAATAATATCGAAAATGCACAGATGTCTTCTAATAACAACGATTTAAGCATGAACACTTCCAATATCACTAATAATGAtagcaacaacagaaacaatcaATTAGACGAGTACAACAATTGCaacgttaataataataataataaaattactacTGGTTGTGCAACATCATCCTCAGATGCTTCcaattgcaataataataacaacaacaacaacagcaacaatactaataatacaattacaaactcCCAGCAACAACCCTTGAATACAAATTGTCCGTCTAGTAATGGCATGGGCAGCGACAATTTACAACATAATCAACACGTAACCCCAGCAAGTGGTACTTCCTCCACCATTTGTTTTGATAACTTGGAACAAACGCGACAGCagcgacaacaacagcaacaacaaatatctTCAGAATTACATGATACTTTGGGTTTCTTTAATGAAACTTTAGATTTATCACACGAAGATATTCAGCGAACCCTAATAGCGAATATGCCTGGAGAAAGTAATCTTTTGACTTCATTGGACTTTATGAACTCGCAGGTAATGGCTACAGATGTGGGCGGTAGTAACGTTGTATCGAGTGCGGAATGTGATGCCGATCCAGAGCTGTCGGGTGGTGCAGAGGCAGATGATGAAGATACAGATGATGTTTTCGCTAACTTAGATGCTTTCGATATGCTGGTTGAATTTCCCGAATTGGATTTGGACGATAAACAGGCCTTAACCAATACTGCTTTGGAGCAGGCTGTCACGGGAGTGCACACAAATGAGGCTTTAAGCGTTAACTCCTCCTGTCAGAATTTACATCAACTTTCTCAATATGATAGTAGCTCCAGTTCAACTCTGAATTGCGATAAAAAGATGATGAAAATCTGTGATTTTAGTCCAGACTGGTCTTACCCAGAAGGTGGTGTTAAGGTCTTAGTAGCTGGCCCTTGGACATTGAATGCCCACTACACTGTGTTATTTGATTCACAGCCAGTGCCGACAGTTCTGATACAAGAGGGAGTCCTGCGCTGCTATTGTCCTTCTCATGAGGTGGGCTATGCCACTTTACAAGTTTCCTGTGATGGTTTTGTCATTTCGGACTCGGTTatgtttgaatataaaatgatGACCTGTCAAGAGGCACCCTTCGATGCCAATACAAACGAttgtttttataagttttctCTGTGCAATCGGCTAACAACTATTGAAGAAACAATGCAAGCCAAAGGAGAAACAGTTACCACTGTAACGTCCTCCCATCAGATATTTTCGCTACAAGGCAATCTGGAAGAGAAACTGGTTGCTTATTGTCATCAGTTGACGAAAATGTCTTGGCAAAATATTGCCTCCAGTGGAAATAATTGGAGTGCTGGCTATAAAGGCATGACCCTTTTACATTTGGCTGCCGCTTTAGGCTATAATAAGCTTGTTTGTGCTCTTCTAACTTGGCGCACTGAAAATCCCCACATCATTTTGGAGACAGAAATAGatgcctttagtcaggatactCATGGCTATACGCCCTTGacTTGGGCATGCTCACGTGGTCATTTGGATACCGCCATTTTGCTTTATAAATGGAatcaaaatgctttaaaaattaaaaatcatgcaCAACAGACACCGCTAGATGTGGCCCATAACAAAGGccataaaaatattgttgcgGAAATTTATCGTTTGGAACAGGATCGCCAACGTAAACAAAGTAGAGGTTCTTTAACCAGTTTATCGATCAATCTAAACAAATATTCGCTAAGTAATGATGACACTGATGATCATCCATCGTTTGCCATATTTGATTCTACTGATTCGCAACGCAGTCATGATGGTGTATTCCTAAGGCCCGTTGCTGTGCCCAGCAATCAGAGTCCACCAAACAGCAGTCGTTTTTCAAAACGTTCTTCTATAGATAGTGGCATCAGCATGGACATACGAACGAAACCCATGAAAACTTTTAAAGATATATCCCGTTTACACAgCCTGGATgctcatgacaattttaataattccatTGAGTCTCCATTGGATACCATAGgctctacaacaaatacaacgaattcGCTTTTATCACCGTTGCGGAAGATGGATTTTGCTTTGTgCGAAGTGTCAACTGGTGATTCAAGTCCTTTGCCAGACAAAAATAACGATGATGATACATCGACCATTGATAATGATGATTGTAATGATGATGTTAcaataccaaataaaataattgatgcTGTTGTAGgGGATTCTGATGCAAAAGTCTTAACATTAGCTGAACATATCATAGCCGCTATGCCAGAGCGTATAAAGAATGAGGCTGATGAGATGATGGTTTTGGGTAGTCCCATGACAGAAACTTTAAACACAGAATCTGCCGGCTTAAATGATAGTTTTATGGATCCTCTATTAGACTCTTTGCCTAATGCTCACTTTgataatgaattcaattttgattTCAATGATCATAATTATCGTTATCATGAAGTCAGTACACCTTGTTCCAGTTTAAGTCCAGCTAGTTCCGGACCATTGCAATCGCCAGCTAGTTATTCGATACTGGGTCATGACCCATCTGTTTCTTCACCCAGTCCTCCTCCCTCAACAAAGCAATTGACAGAATTTCTACATGCCTCCAGCAACTCTCAATATCCGTTTGAAGcagacttttcaaaattgacttTAACTGATACCGAGCAACGAGAACTGTACGAGGCTGCCAAGTGCATACAAAAAGCCTATCGCTCGTACAAGGGCCGACAAAAGCTCGAAGAGCAAAATAAAGAACGCACAGCTGCTATTGTCATACAAAACTATTACAGACGCTATAAACAATTCGCCTACTATCGTCAAATGACAAACGCTGCTCTAGTCATACAACACGGTTATCGTTCGTATTGCCGTAATAAACGTTTTAAGAAATCTCAAACTTCCAATAATTTAACTGGTTCTGGCAGTTCATCTGGCCTACATAATACCGACAGTCAGGATAGCACCAATTCTCAATGTTTATCGAGTTTTTTCGATAACTTCAACAAGCAAGAGAAACAATCGGATAGTTCACCGCAATCATGTGCCACGCCAAAAGAAACTAGTCCATCGGGACCTTTaaagtaa
Protein Sequence
MGLRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTENPDIVLVHYLNVPYPDDNKMAVIAPSISLWGDKKEWTKEELVSQLKPMLSTVTSDDESDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDTSCADGKTCTHPVMRRPSLIKASNEKRLPPTNAVEPYNTNNTPNVVVGPKLYSRWADKRAAIRESANSMDTNGYQHHAQHHGHGHHGQTQQLAQESAIKFQIIPPHNEQQQQQQHYRHHYSANGSNSSSTTANHQQQLIATRNNLIMQQHQQQQQQMHTNQSNFNQVHNQTNNNNNNSNIINHNTNSNNNNNNSNIQRYANTTNTSMQSQQQQQQQQQQQLHRFQIAKTTITAMDNNTNNQHNNLTSVSTAIANNTNNVGGENVVDMLNLPLQQQQQLQQQHHHHHHQHGMTTTNSNANNKINHNTNINTQTANQNSHTNPITNSITPSPSSSSSSSSCLSSSSPSTNSNSVTTTVAPQLMSTPQNDLNAINNNGNINNSNNNNNNSMDISCNSNNSNNNNTNCNTNNNTTVAATTTTPATTTIFNNYNQQQLNTSNNSNNNNSNQQQQQQKSNIPQEQYYKLQHHKLQQQQQQQQQQSTLTSSTGAAAVAASSTVEPMCMSPEHQPSSLSNSSSSCMSPQILLKQQQQQQQQQQKQTHLIISSSDSMSEASSTLSTTSLSSSSQTFMDLNQKSSTLDNNKNNNNNNNNNNDSNHNTNNNIENAQMSSNNNDLSMNTSNITNNDSNNRNNQLDEYNNCNVNNNNNKITTGCATSSSDASNCNNNNNNNNSNNTNNTITNSQQQPLNTNCPSSNGMGSDNLQHNQHVTPASGTSSTICFDNLEQTRQQRQQQQQQISSELHDTLGFFNETLDLSHEDIQRTLIANMPGESNLLTSLDFMNSQVMATDVGGSNVVSSAECDADPELSGGAEADDEDTDDVFANLDAFDMLVEFPELDLDDKQALTNTALEQAVTGVHTNEALSVNSSCQNLHQLSQYDSSSSSTLNCDKKMMKICDFSPDWSYPEGGVKVLVAGPWTLNAHYTVLFDSQPVPTVLIQEGVLRCYCPSHEVGYATLQVSCDGFVISDSVMFEYKMMTCQEAPFDANTNDCFYKFSLCNRLTTIEETMQAKGETVTTVTSSHQIFSLQGNLEEKLVAYCHQLTKMSWQNIASSGNNWSAGYKGMTLLHLAAALGYNKLVCALLTWRTENPHIILETEIDAFSQDTHGYTPLTWACSRGHLDTAILLYKWNQNALKIKNHAQQTPLDVAHNKGHKNIVAEIYRLEQDRQRKQSRGSLTSLSINLNKYSLSNDDTDDHPSFAIFDSTDSQRSHDGVFLRPVAVPSNQSPPNSSRFSKRSSIDSGISMDIRTKPMKTFKDISRLHSLDAHDNFNNSIESPLDTIGSTTNTTNSLLSPLRKMDFALCEVSTGDSSPLPDKNNDDDTSTIDNDDCNDDVTIPNKIIDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPMTETLNTESAGLNDSFMDPLLDSLPNAHFDNEFNFDFNDHNYRYHEVSTPCSSLSPASSGPLQSPASYSILGHDPSVSSPSPPPSTKQLTEFLHASSNSQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQFAYYRQMTNAALVIQHGYRSYCRNKRFKKSQTSNNLTGSGSSSGLHNTDSQDSTNSQCLSSFFDNFNKQEKQSDSSPQSCATPKETSPSGPLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01314669;
90% Identity
-
80% Identity
-