Scar027503.1
Basic Information
- Insect
- Sarcophaga carnaria
- Gene Symbol
- grh
- Assembly
- GCA_958299815.1
- Location
- OY283153.1:9838048-9937386[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.32 6.1e+03 -2.7 2.8 7 33 81 107 65 123 0.49 2 3 1.2 2.3e+04 -4.6 0.7 12 32 209 229 202 234 0.51 3 3 1.4e-63 2.7e-59 201.2 0.4 24 221 566 758 552 760 0.94
Sequence Information
- Coding Sequence
- ATGTCAACACATCATCAAAGCAGTTCGCAGCATGAAGTGATTATACATCAGCACAATGGCAACACGTATCAATTGCCCGCCTCATCGGTGGCCTCACGTTACTTTGAACATCCCCAACTCACCACCGTGGTGTCGGCAGCAACACCACAAACTTTGCTTAGCCTATCGCCCAACGATAGTGCTGCCCATCCCCATAGTCAGCAACAGCAGGCGGATGACAGTGGCATACAACAGCAGtctcagcaacagcaacagcagcaacagcaccatcatcaacaccaacagcaccagcagcagcaacagcaacagcatcaatTAATTGAAGCTGCTGCCACCACGGTTAATTTAAGTGCCTTGGGTACGCCGCAATTGCATCAGGTGCAGACATCGAATGGCACAACATCGTTTGTCTACGAATATTACAAAATACCCGATAAGGATGCGTCTGGTGGTGCTGAAGATGAACTACACTGGAGTGCTCCCAGTGCCAAGCTAAATGGTCAAACCACACCTCTTGATGTGTCGAGCCTATCGCAAAACGAGATACAAGGCCTGTTGCTTGGCTCACACCCATCAGCGACAACGGCTGCTGTGGCTGCGGCGGCAGCAAATGTCACCACAACAACATCACTggcacaacaacagcaacaacaacagcagcaacaacagcaacaacaacattcaacCATAGTTAGTGCATCAGGTGGTGCAGGAGGAGGCAATGGCACAGTGGTTATAACAGCTGATCAGCAGCATCGTCAACAGGCCGCATCGAGTACAGCAACCATAAGCATTAAAAGAGAACCCGAAGATTTGCGTAAGGATCCCAAAAATGGTACCGCTAGCAATGGCTCAGCAGCCAGTAGCGGCGGACACAAGGTTATTGTATTACAACAATCACCATCACCCACACAAATCCATATTAAAGAACCGCCTCCCAGTCCTGGAAGTCCGTCTAATCATACAGAAGCCATGTATGCTGCCGGCGGCGGCACTCAAATTTATCTCCAGGGTCCACATCAAAATTCTGCAGGCGGACCTGGTAGCAATGTAAACACACAAACGCCCAGTCCAGGTCCTTATATTGGAGCCGATGGCTATGGCATGTATACAACTAGTCGCTTGACCGCAGCTCCAACCACCACCACCTTCATATCGGAACCGTACTATCGTGAATATTTTACCACCACTGATGGTCAAGGTTATGCACCCACACGCAGTATATATGGCGACAGTGATGGCCCCCAGCCAGGCACAACATATGAGGGACGTTtcacaaccacaaccacaaATAGCGGTGGTGTACCACCACCACATCCAGCGGCAAATGTATCCAAAAATAATGGCGGTACACCCATCTATGCAAAGACAGTAACGGCAGCTGGCCTCACCGTTGATTTGCCCAGTCCGGATTCCGGCATTGGTGCTGATGCCATAACACCACGTGATCAAAACAATATACAACAGtcCTTTGATTACACGGAACTGTGCCAGCCCGGCTCATTGTTGGATAATAATGGTGGCATACCCATATCGGTGAATAGCATACAACGTGGTGCTGTTAATGTTCATGGTGGTCAAAATAGTCCCACAACCTCACTTGGCGGTACTAGTGCCAATGGCAGTGCTACACGTTCCCGACCCTGGCATGACTTTGGACGTCAAAATGATGCGGACAAGATACAAATACCAAAAATattcacaaatgttggtttcAAATATCATCTGGAATCGCCAATAAGTTCGTCACAAAGGCGAGAGGATGATCGAATAACATACATCAACAAGGGACAATTTTATGGTATTACATTGGAATATATCCCGGATGCAGACAAGCccattaaaaatacaacagtTAAGAGTGTCATCATGCTAATGTTCCGTGAAGAAAAATCGCCTGAAGATGAAATCAAAGCCTGGCAATTCTGGCACAGTCGACAGCATTCggtaaaacaaagaattttagaTGCTGATACCAAGAATTCTGTGGGTCTAGTTGGTTGCATCGAGGAAGTCTCCCACAATGCCATAGCAGTCTATTGGAATCCCTTAGAGAGTTCTGCCAAGATAAATATCGCCGTGCAATGTTTAAGTACAGATTTCAGCAGTCAAAAGGGTGTAAAGGGTCTGCCTTTGCATGTACAAATTGATACGTTTGAGGATCCCCGAGATACACAAGTCTTCCATCGAGGTTATtgtcaaattaaagttttctgcGATAAGggTGCCGAACGTAAGACACGTGATGAGGAGCGTCGCGCTGCTAAACGTAAAATGACCGCAACGGGACGTAAAAAATTAGATGAATTATATCATCCGGTTACAGATCGTTCCGAATTTTATACAATGCAGGATCTTACCAAGCCGCCGGTGTTGTTTTCTCCTGCCGACGATTTGGATAAGGGCTTCTATGGCCATGAGACAGATGGTGCGCCAGACTTAAAAGGCGCCTCGCCATTCCTCTTGCATGGACAAAAGGTTGCCACGCCAACATTGAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAGAAAGATCATATACTGGAGCAAGGCCTGGCCATGGGTGAATTTGTGCCACCGCTGAAACGTGGTCGCATGACACCACCCACCAGTGAACGTGTCATGTTGTATGTGCGACAAGAAAACGAAGATGTCTATACGCCTCTACATGTTGTACCGCCCACCACAATCGGCCTTTTGAATGCGattgaaaataaatataaaatttcaacaacgagtataaataatatttatcgaacaaataaaaaagggaTTACAGCGAAAATTGATGATGATATGATATCGTATTACTGCAATGAAGATATTTTCTTATTAGAAGTACAACAGCTGGAGGAGGAACTATACGATATCACCTTAACCGAACTGCCGAATCACTGA
- Protein Sequence
- MSTHHQSSSQHEVIIHQHNGNTYQLPASSVASRYFEHPQLTTVVSAATPQTLLSLSPNDSAAHPHSQQQQADDSGIQQQSQQQQQQQQHHHQHQQHQQQQQQQHQLIEAAATTVNLSALGTPQLHQVQTSNGTTSFVYEYYKIPDKDASGGAEDELHWSAPSAKLNGQTTPLDVSSLSQNEIQGLLLGSHPSATTAAVAAAAANVTTTTSLAQQQQQQQQQQQQQQHSTIVSASGGAGGGNGTVVITADQQHRQQAASSTATISIKREPEDLRKDPKNGTASNGSAASSGGHKVIVLQQSPSPTQIHIKEPPPSPGSPSNHTEAMYAAGGGTQIYLQGPHQNSAGGPGSNVNTQTPSPGPYIGADGYGMYTTSRLTAAPTTTTFISEPYYREYFTTTDGQGYAPTRSIYGDSDGPQPGTTYEGRFTTTTTNSGGVPPPHPAANVSKNNGGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPISVNSIQRGAVNVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFTNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLTKPPVLFSPADDLDKGFYGHETDGAPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILEQGLAMGEFVPPLKRGRMTPPTSERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQLEEELYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00997477;
- 90% Identity
- iTF_01260759;
- 80% Identity
- -