Sbul013788.1
Basic Information
- Insect
- Sarcophaga bullata
- Gene Symbol
- zfh2_2
- Assembly
- GCA_005959815.1
- Location
- QOCX01000484.1:63755-127880[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 3.2 1.8e+02 2.6 0.4 2 23 141 163 140 163 0.93 2 10 0.00013 0.0072 16.5 1.4 2 23 766 788 765 788 0.96 3 10 3.2e-05 0.0018 18.4 0.7 1 23 820 844 820 844 0.92 4 10 0.0056 0.31 11.3 0.4 1 22 947 968 947 971 0.91 5 10 5.5 3e+02 1.9 1.8 1 23 1188 1212 1188 1212 0.89 6 10 0.71 40 4.7 1.0 1 23 1523 1546 1523 1546 0.94 7 10 0.07 3.9 7.9 0.1 2 23 1667 1689 1666 1689 0.96 8 10 0.018 1 9.7 1.2 2 22 1755 1775 1754 1778 0.89 9 10 0.00071 0.039 14.2 1.7 1 23 1829 1851 1829 1851 0.97 10 10 0.0017 0.094 13.0 1.5 2 23 1858 1880 1857 1880 0.94
Sequence Information
- Coding Sequence
- AACATTTATACTGATGACAGCTCACCAATGTCCACATCTGATGTTGAAAGTTTTACAGGCAAAATCGTTTGTAACATCGATGGCAGCTCTTATATAATCGACGCTGAAAAGGCAACATTATCGAGCATTAGCGATAATTCTTTAAGTGttGCAGCTATTTCTTTTaccaatcaaaaaaaatattcaatattacaaacaacaaaatcgtCGTCAAAATCTAgtgtaaattcaaattcaacctCAAAGAATATTGCGACTGTTGGTGAGGACGTTCCGAAACAGACTGAAAAACAAGCGCGTCAGCCGTCAAATCTGGGGACGAATCCTAAAATTCATACTTTCCGAGTTGTGAGCGCAAATGATGCTAACGTTCAGCTGCTACGagaaaataatcaattcaaaatACAGAAACCCATTTTAATGTGCTTTATTTGTAAACTCTCATTTGGCATTACGAAATCTTTTAGTTTGCATGCTAACACCGAACACGGTTTGGACTTGCAAGACCTGGAAAAACACTTATTGATGCAACGCGAATATTCAAGTGCCATTATACAAAGAACTATGGACGAGAGTCCCCAAATTTCCTTTCTAGAACCTGTCGATACTGACGCTCTGTCCATGAGTGGCTCTTCACCCACTAATGATTTAAATAGTATGGAAGCGCATgctggaaaagaaaaaaaggaagcacTAAATACGGCAACATCAGACACAACCCAGAAAGTCGCTATTTCTTCTTCAAATGCATTCTCACAGCAGGTAACAACCATTACATCTTGCTCTTCATCACCACCATCGTTATCTTCTTCTCCTATGTCGGTTTGCTGTACAAACAGTAGCACAACTACTACTAGCACTATTACGACAACAACTTGTGATAAGTCCCAAGGGATTTCACCGCAGCACGGTGACGATCAGCATTCTCAGTGTATATCAGAATCTCATGTCAATGCATCGGTAATATTTACAACTACCACTTGCACAACTTCAACCACTAATTCTTTAGAATCATTAAATTTAGACAAATCAAAGACTAATAACAACTATAACATAAGTGAATCGTTAGTACATAATTTTTCATCTTCATCTACAACGACACCCGTTCCTTCATCATTTAAACTGTCGACTACAACAGCGACAACATCGACAACTGGATCGTCTTCGGCAGCAATAGCATTAACATCAACAGCATTACCAACAACGGCAGTACCATCACCATCAACTTTGTCATCGTCATCCTTAACCCTAACAGTTGGGGTAGATTTATCGACGTCTACTGGAAATATAGCAACAGATGCTATTAGTACTGATAGTTTagtaaatattaataagtttaataatgataattcCAATTCCAACAACGATTCCATTGAACCTCAAGCACAAGACATTACAAATACACCACAATCCTCAGATCTAAGTCCAAAATCAAACCATTTATCGCCATACCAACCGACGAGTCTAAGTCCTATCGCAATGGGCGATTTCCTGCAACACCATTTACAACGCCTTACTGGTGGTAGATTAACAGCTGATGATGAATCCCAACATAAAAACCTCGACAACGATAGCATGAGCTGGCCTCACCCTACGGCGAATACATTTCCGTTACCCACAACCGCCTCCAATGCCTCAGTCGCACAAATAAGTTCCTTACACGCCTCACTGGCTGCTTTAAACTCCGAACAAAATACTAGTAGTGTTAAGTTAATAAGTAAGTTCCTTCAACATCAATTGGTTGctgcacaacaacagcaacaacagcaccacCAGAAACAGCTCGTCGCTCATCCTTTAAATCACACCGAACAATATCTTAACCCAGCCACAGTTTCAACCCCAAATACAACCTCAATGTTTAACGTTTGTCCAGAGCACTCAAACTTCAAGGGCATAGACTGTAAAACGTGCGAAATGCTTGAAGCCCATCAAAATTACAAACCATCACCACAAGTAACACCCCAACGTTCCCCCACGAATTCCGGCATAGCCGTTGCTGCTGCGGCTGCAGCCGCTGCTGGCCTAGGTCTTTTAACGGCTGCAAATCAACTCTCGATGTCACCAAATCATTCGTTAAATGCCAACAACTTAGCACCAGGTCTTAATGTCCCCCTCAATACACCTCCTCTAAGTAATTCCAGCAATACGTCTAGTTTCACCATAGGTGCATGTTCGGATCATATCAATGGTCGTCCTTTGGGAGTCGAATGTGCTCGgTGTGAAATGATTTTGAACTCGGCTCGTCTGAATAGTAATGTGCAAATGTCTACTCGGAATTCATGTAAGACTCTGAAATGTCCTCAGTGTAACTGGCACTACAAATATCAAGAGACTTTAGAAATTCATATGCGCGAGAAACATCCTGATGGAGAATCTGCATGCGGCTATTGTTTAGCagGTCAACAACATCCACGTTTGGCACGCGGCGAATCATATTCGTGCGGATACAAGCCCTACCGCTGTGAAATTTGTAATTACTCAACGACTACCAAGGGCAATCTTTCCATACACATGCAATCAGATAAGCATTTAAACAATATGCAGGAGTTAAACAGTTCTCAGAATATGGTGGCAGCCGCTGTAGCGGTTGCGACTGGTAGTATAGGAAAATTAGATGCGACGCCAAAAATCAATTTACCGAATACAATAAGCAGTTTGAACcctcaacagcagcaacagcaacaacaacaacagcagcaacaaccacaacagaCTCACAGTAGAGCCGGTGGCCTGCCATCGGCCAGTTGTGAAACATCGGCCCTAAACCTGCAGTCGGGGGGAAATggaagtagtagtagtgttgGCTGCAGTACCAATAAACCGAAACCATCATTTCGCTGTGATATTTGTAGCTATGAGACATCTGTGGCACGTAATTTACGTATTCATATGACCAGTGAGAAGCATACGCATAACATGGCGGTGTTacaaaataacattaaacataTACAAGCTCTAACatttctacaacaacagcagcaacaacaacagcagacacaacaacaacagcagacacAACCACAACAGCAAGGTAACAATTTTATGCCAGAAGTAGCTTTAGCGGACTTAGCGTATAATCAGGCACTTATGATACAATTACTACACCAAAAtgctgcagcagctgctgcaCAAGCTCAAACACATCAGTCCGGTTCCAGTTCGATCGTTGAAGGGTCCTCGACCTCAATGCCGCCTAGTAAGGGTGGCATCAAGCTGCAAGCCACATCTCCTACTGCTACTGAAATGGCGCTTTCATCATCATATTCGCCAAAGTCAAATGACTTAAGTTCTGATTTATCATATATCGAGCCGCCAATTAAGCCGGATCTGTGGCCCACGACCTTATTCAGTTGCCTGGTCTGCTCTAACTTCAACTCTAACAGTCTGGATGAGTTAAATCAGCATTTAATGGTAGACCGTTCTCGACAAGTAACTCCTTGCAGCAACTCCTCCAGTTCCTTGTCCCCAACGTCTAGCAATACGGCTTCTACTTCGGTAAGCACTGGTTCAGGCCCGACTTATTTCGCCGACATAATGATTTtccaaaacaacaactacttatGCCGCCTATGCAACTACAAAACTAATTTGAAGGCCAACTATCAATTGCACAGTAAAACTGACAAACATTTGCAGAAATTAAACTTTATCAATCATTTGCGTGAAGGAGGTGCTTCTAATGAATACAAACTCAAGTAttatcagcagcaacagcaacaaattggCGCTAATACTATccaaattaaatgcaatgcCTGTGATTTTTACACGAATTCCATACAAAAGCTATCTCTACACACGCAGCATATGCGCCATGAAACCATGATGATGATATTCCAACATTTGAACTACTTAGTCCAACAACAGCAGACCAGTAGTAATGACTCCTACATAAACATGAACAGTAACGCGGCGCCACTAAGTCTGGTAGATGGGGCAACAACATCAGGAAaaccagcatcatcatcatcatcagcaataacaacagtatcaacatcaacaacaacctcatcatcgtcatcatcattaacattaTCATCACCAATATCAGTAACCGCTACTAAGCCACCATCAACCGTTGAGTGTAACAAGTCATTGCTCTGTCATCTGTGCAACTTTAAAGCTAATTCATTGCTTGAAATGATACAGCATGTGAAGAGTATACGTCATTTGCAAGTTGAGCAGTTTGTGTGTCTTCAAAGACGCAGCGAACAACTGGAGACACCCAACCTTGACGATATTTTTAAGCTGTGTGCAAAGTCTTATCACAACAACGACTCAATGATGCCGAACGTAACATCAACTTCTTCTTCTAACACCATCGATATCAAAAGCAGCGGTTCATCGTTCTGTCTTTCCAATTTAGTTGAATCAGAAAATGAAGatttttcaaataaaatgacattTGATCAGGTTGATGAAAGCGAAAACATTACTAATTTAGATAATGCTGTTAATTTAAGTGCTTCGAGAGCTCAGAATGAAAACATCGATAAAGCAACCACATCGCCAGAGGCTGCAACAAGTGCTGCGGCATCTTCTAGTATACCacctattattttcaaatgtaatcaTTGCGACTTTTTTGGTCAAGTAAAGCAAGAAGTTGAGATTCATATTGAGACATCTCACCCGAatgctgataatgatgatattatAAGCATACCCACAAATGCAGTGGCTATTCAGGCATTTCACGCTGCAATGGCGGCAGCAACATTAGCTGCTGTTAGTCGAGCAACAAAACCATCCCACACTCCTTCGCCGACAGTTTCGCCGAACATAGGTGAGGCAAAAGAAACTTCTGCGGCACTGATTGATGCTGAAGATAAAGAACCCGTTGCAATTAAATGTGAGCGGCTTGATACAGTAGAATCAGAAATTGTATCCAAGGAGATAGAAGAAGACAAAAGTGTCAAAAGTCTCGCAATGGAAGTTATTGAATCAGAAAATGTTTCACGTCAAGTGAAACAACACCAAAATATCGGCGTGCAATGTCCTCTATGCCAAGATTTCTTTACGGAGAGAAACGCATTGGAAATACACTTGATGAAAGTTCATAGCGTTAATAAGGACGGTTTGGCGCGGCTTCTCTTACTGGTAGATACTAGTTTATGGATGCAAAATGATAATACTTCTAATGACAGTCGATCTCAATCAGCTGTTACAAAAACAGCTTCAAGTTCCTCTTCTAAAATCAGAAGTGATGCTCCTGCATTGGCAAATCAACCAACTTTAGCAGCGTATGAGTTACTAGTATGCCAACAATGCGGTTCTAGCTTTAAACACGAACAACAACTGCTACAACATGCGCAAAAAATGCAGCATTATACGATGCAACAGGGAGAATATCTTTGTCTAGCATTTAACTCAGTTCGAAACCCATGCACAATGCATTATCCATCTCTTGCTGCTATGTTTAACCACTACAACGATACTCATATGCGATTGGTAATATCCGAACGACATGTTTATAAATATCGCTGTAAACAGTGCTCTTTAGCATTCAAAACTCAGGAGAAATTGGCTACTCATACTCTATATCACACTATGCGCGACGCTACAAAATGCGCTATGTGTCAACGCAACTTTCGTAGCACTCAGGCGCTCCAGAAGCACATGGAACAGACTCACAATCAAACGGCAACGGATAGCAATAGTTTGGAGTGTACCAGTCCCAGAACTGTTTCGCCATCAGGAAGCGAACAAGAAAGACCACCTACGGAGACTGGTCAAACAGTGAGCAATAGCGACAAATTTGAAAACGAGTCCAGTAGATCTGTTACACCTGGACAAGATGTATGTCCACCGATACAGTCACCTAGTTCCAATCAAAACGATCCACAGAATTCCGCGTCACCTTCagttcaacaacagcaacagataTCCGCTCTAACAGCATTAATTAACCATCAACAACTGTCGGCACCACCTTCTGATATCCTGCACCATTTACAGATGCAACATCAGCAGTTTCAAAATTTACCGGCTTTGCACAATctacaacaaatgcaacaacaattaccaCAATTTGCCGCAGCAGTAACAGCATCCGGAATGCCGCTCAACCCAGTCGAAATGCTAAATCTTATGCAATTTCATCACCTCATCTCACTAAACTTTATGAATTTGGCACCGCCTTTAATATTTGGTGGCAATAATACACCATCAAACCCACCGTCATCATCATCTGTTGCAGGCTCCAACACTACTGCTCCCATAAATATGCCAAATAATAATACATCCAAAACTTCCTCACACGTTGCATCAACTGATTTGACAACATCATCATCCGCAACTAGTTCCAATACCTCACAATCGATGACAGCTTTACCGAATGTTGAAGTTAACACacaaatattgcaacaacaacaaatatcaccTGGAGCTTCGACTTCCCAATTGCTTAATAATCAGAAACGTGCCCGTACACGTATTACAGATGATCAACTTAAAATACTACGCGCTCATTTCGATATAAACAATTCGCCCAGTGAAGAGAGTATTTTGAAATGTCCCAGAAGGCAAATTTGCCAATGA
- Protein Sequence
- NIYTDDSSPMSTSDVESFTGKIVCNIDGSSYIIDAEKATLSSISDNSLSVAAISFTNQKKYSILQTTKSSSKSSVNSNSTSKNIATVGEDVPKQTEKQARQPSNLGTNPKIHTFRVVSANDANVQLLRENNQFKIQKPILMCFICKLSFGITKSFSLHANTEHGLDLQDLEKHLLMQREYSSAIIQRTMDESPQISFLEPVDTDALSMSGSSPTNDLNSMEAHAGKEKKEALNTATSDTTQKVAISSSNAFSQQVTTITSCSSSPPSLSSSPMSVCCTNSSTTTTSTITTTTCDKSQGISPQHGDDQHSQCISESHVNASVIFTTTTCTTSTTNSLESLNLDKSKTNNNYNISESLVHNFSSSSTTTPVPSSFKLSTTTATTSTTGSSSAAIALTSTALPTTAVPSPSTLSSSSLTLTVGVDLSTSTGNIATDAISTDSLVNINKFNNDNSNSNNDSIEPQAQDITNTPQSSDLSPKSNHLSPYQPTSLSPIAMGDFLQHHLQRLTGGRLTADDESQHKNLDNDSMSWPHPTANTFPLPTTASNASVAQISSLHASLAALNSEQNTSSVKLISKFLQHQLVAAQQQQQQHHQKQLVAHPLNHTEQYLNPATVSTPNTTSMFNVCPEHSNFKGIDCKTCEMLEAHQNYKPSPQVTPQRSPTNSGIAVAAAAAAAAGLGLLTAANQLSMSPNHSLNANNLAPGLNVPLNTPPLSNSSNTSSFTIGACSDHINGRPLGVECARCEMILNSARLNSNVQMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAAAVAVATGSIGKLDATPKINLPNTISSLNPQQQQQQQQQQQQQPQQTHSRAGGLPSASCETSALNLQSGGNGSSSSVGCSTNKPKPSFRCDICSYETSVARNLRIHMTSEKHTHNMAVLQNNIKHIQALTFLQQQQQQQQQTQQQQQTQPQQQGNNFMPEVALADLAYNQALMIQLLHQNAAAAAAQAQTHQSGSSSIVEGSSTSMPPSKGGIKLQATSPTATEMALSSSYSPKSNDLSSDLSYIEPPIKPDLWPTTLFSCLVCSNFNSNSLDELNQHLMVDRSRQVTPCSNSSSSLSPTSSNTASTSVSTGSGPTYFADIMIFQNNNYLCRLCNYKTNLKANYQLHSKTDKHLQKLNFINHLREGGASNEYKLKYYQQQQQQIGANTIQIKCNACDFYTNSIQKLSLHTQHMRHETMMMIFQHLNYLVQQQQTSSNDSYINMNSNAAPLSLVDGATTSGKPASSSSSAITTVSTSTTTSSSSSSLTLSSPISVTATKPPSTVECNKSLLCHLCNFKANSLLEMIQHVKSIRHLQVEQFVCLQRRSEQLETPNLDDIFKLCAKSYHNNDSMMPNVTSTSSSNTIDIKSSGSSFCLSNLVESENEDFSNKMTFDQVDESENITNLDNAVNLSASRAQNENIDKATTSPEAATSAAASSSIPPIIFKCNHCDFFGQVKQEVEIHIETSHPNADNDDIISIPTNAVAIQAFHAAMAAATLAAVSRATKPSHTPSPTVSPNIGEAKETSAALIDAEDKEPVAIKCERLDTVESEIVSKEIEEDKSVKSLAMEVIESENVSRQVKQHQNIGVQCPLCQDFFTERNALEIHLMKVHSVNKDGLARLLLLVDTSLWMQNDNTSNDSRSQSAVTKTASSSSSKIRSDAPALANQPTLAAYELLVCQQCGSSFKHEQQLLQHAQKMQHYTMQQGEYLCLAFNSVRNPCTMHYPSLAAMFNHYNDTHMRLVISERHVYKYRCKQCSLAFKTQEKLATHTLYHTMRDATKCAMCQRNFRSTQALQKHMEQTHNQTATDSNSLECTSPRTVSPSGSEQERPPTETGQTVSNSDKFENESSRSVTPGQDVCPPIQSPSSNQNDPQNSASPSVQQQQQISALTALINHQQLSAPPSDILHHLQMQHQQFQNLPALHNLQQMQQQLPQFAAAVTASGMPLNPVEMLNLMQFHHLISLNFMNLAPPLIFGGNNTPSNPPSSSSVAGSNTTAPINMPNNNTSKTSSHVASTDLTTSSSATSSNTSQSMTALPNVEVNTQILQQQQISPGASTSQLLNNQKRARTRITDDQLKILRAHFDINNSPSEESILKCPRRQICQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -