Basic Information

Insect: Sarcophaga bullata
Gene Symbol: -
Assembly: GCA_005959815.1
Location: QOCX01000110.1:442715-445049[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.013 0.73 10.2 0.4 1 21 9 29 9 30 0.95

2 14 0.22 12 6.3 0.5 2 23 42 64 41 64 0.94

3 14 0.0061 0.34 11.2 1.5 2 23 79 100 78 100 0.97

4 14 1e-07 5.8e-06 26.2 1.0 2 23 107 128 106 128 0.96

5 14 0.11 6.2 7.3 3.7 1 23 263 287 263 287 0.95

6 14 3.5 2e+02 2.5 3.1 1 21 294 314 294 315 0.92

7 14 4.7 2.6e+02 2.1 1.0 1 23 324 347 324 347 0.89

8 14 0.004 0.22 11.8 0.4 3 23 359 380 358 380 0.90

9 14 0.0026 0.15 12.4 3.5 1 23 387 409 387 409 0.96

10 14 0.064 3.5 8.0 0.0 2 22 436 456 435 456 0.93

11 14 8e-05 0.0045 17.1 1.8 1 23 513 536 513 536 0.98

12 14 0.16 8.7 6.8 0.6 1 23 573 596 573 596 0.90

13 14 0.21 12 6.4 2.8 1 23 630 653 630 653 0.94

14 14 0.00044 0.025 14.8 4.6 3 23 681 701 679 701 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.013	0.73	10.2	0.4	1	21	9	29	9	30	0.95
2	14	0.22	12	6.3	0.5	2	23	42	64	41	64	0.94
3	14	0.0061	0.34	11.2	1.5	2	23	79	100	78	100	0.97
4	14	1e-07	5.8e-06	26.2	1.0	2	23	107	128	106	128	0.96
5	14	0.11	6.2	7.3	3.7	1	23	263	287	263	287	0.95
6	14	3.5	2e+02	2.5	3.1	1	21	294	314	294	315	0.92
7	14	4.7	2.6e+02	2.1	1.0	1	23	324	347	324	347	0.89
8	14	0.004	0.22	11.8	0.4	3	23	359	380	358	380	0.90
9	14	0.0026	0.15	12.4	3.5	1	23	387	409	387	409	0.96
10	14	0.064	3.5	8.0	0.0	2	22	436	456	435	456	0.93
11	14	8e-05	0.0045	17.1	1.8	1	23	513	536	513	536	0.98
12	14	0.16	8.7	6.8	0.6	1	23	573	596	573	596	0.90
13	14	0.21	12	6.4	2.8	1	23	630	653	630	653	0.94
14	14	0.00044	0.025	14.8	4.6	3	23	681	701	679	701	0.95

Sequence Information

Coding Sequence: ATGCACAATGATTTGCCTCTGCCATACACTTGTAATTCCTGTACCCAACAGTATGTCAGCAATGATTTGTTGCAATATCATTTGTTAAGAGATTGTTTAAATGAACATCGTCGTGTAGCTACGCAATGCGAATTTTGTAAGGCTCGATTTATATGGCCAAATAATCTCTTAAAACATAAAGATATGCAGCACAAACATCAAAAGAATCCACGACCTGAAATAGTGAGAACACTCAAATGTGAGTTTTGTGAAAAAGTCTTCATATGGCACAAAGATCTGGTTCGTCATCGAAAAGTCCATACAGAAGTTAAAAGGCTCCCATGTCCACATTGTGGACGTGAGTTTACACGCAAGGATAGCCTATTATCTCATATGCGTTTACATAACGCCAAAACCCTCTCTCTTACTTTAAATTCCAACAGAACTTTAGACTATATACTGCCACATCTATTCAAACCCCATGGTTGTAAGCAAATCAAATGTATGATCTGCTATTCAAAGCACATTCGTCTACATCACATCGTTACAGCatactttgaaaaaagaaaagaaactgaaactctCGACACCATATCAGCGCAATTTTATCCAGACGAAACGGTTATGTGTGAAGAAGATTTAATAAAACGTATTGGAACAGACATTGCTgctgaaaataatttggaaCGTTTTTATtccataacaaatgaaaatggttATGAAGTGAATTTGGATAGTTCAGAGACGGAGACGGATACTTCAGATAACGAGGAGGCTAACAGCAAAGAGGACAAGTTGCAATGTCATTATACATGTGATTTATGTCCTTCACTTAGTTTCAATcggaaatttaaacttttcaaacatcATAATGAAAGCCATACCTGGGAAGAAGCTCCACATGTTTGTATGCATTGCAATGGTCGTTTCTTGTCTAACCATATGTTGCAGCTACACTACAAGAGTCAatgtaaaaatacaataaagagaCACTTTTGTCGTCGTTGTCCGCTAGTTTTCATGTGGGAAAAGAATCTTCAACTTCATTTTATAATGGAACATGGCCAAGaaACTGATTCAATACGCCGCCCTGAGTGTATTATTTGTCAGAAGAAATTCGCAAATCAGTGGGAAATCAAACGTCATATGAGTCAATATCAttctaatgatgatgatgtccaTTATTGTCTTTTCTGTCCGAGAACATTTTATAGCATTGCACATCTTAACGCACATTTAACACGTCATCCTATTGCTGATGTTGACATTAAAACGGCTGAGGTCATATTGAATTCTACATGTTGGCCAAATAAcgataaaataatcaaatgtaAATTATGTGCTCAAATATTTGATACCATGGCTGatttaaatgaacatttatCGACTATATGTTCAGAAAACTTGTGTGCTACACAACATTCCCTCGcaaattattcgataacaaatcaaaaagGTTTTGAATTGCATTTAGAAATGGATTCGGAATCAGAGAAAGAAGACGAAATTGACACTGGTGGTCAACAGAATAAAGAACATAAGTTGAAACTACAACCCTATACTTGTTACTTGTGCGATGTATCATATAGACGAAAATATCAAATGGCTCAACACCAACGTTCCATGCACAATTATGAAGACCTAGCTTTAAAATGTGAACGTTGCATATTTCGAACGGTGTGTCAGAGAATTTTAGACTATCACCAGTCAAACCAatgttttaatgaagaaaagcaatacgaatgtagcgattgcaaatttaaatttatgtggcAGGAAAATCTTGATAATCATGGGTCCATATTTCATCCACCGAAGGATAAATGCACGGAAGAAGAGAATATTATTGgaacaaaatctacaaataaaattgtacagCAGTCGAATAGTAAAAGTCTTCCTTATGTTTTTGAATGCATGGCTTGTCGTCGCCACTATTCTAATAAGGCAGATTATAGGATGCATTTTAAAAACGCTCACTTCAATGATACCCAACTAACAATCGGCAGTAACACAAAATCAGCGAAAAACACCacattgaaaactgaaaacaagcATCTCTGTGCCTTCTGTGGAATGTCATTTCCGTATAATTCTCACCTCATGATTCATATGCACCGTCACACCGGCGAAAACCCATTTAAGGTCTAA
Protein Sequence: MHNDLPLPYTCNSCTQQYVSNDLLQYHLLRDCLNEHRRVATQCEFCKARFIWPNNLLKHKDMQHKHQKNPRPEIVRTLKCEFCEKVFIWHKDLVRHRKVHTEVKRLPCPHCGREFTRKDSLLSHMRLHNAKTLSLTLNSNRTLDYILPHLFKPHGCKQIKCMICYSKHIRLHHIVTAYFEKRKETETLDTISAQFYPDETVMCEEDLIKRIGTDIAAENNLERFYSITNENGYEVNLDSSETETDTSDNEEANSKEDKLQCHYTCDLCPSLSFNRKFKLFKHHNESHTWEEAPHVCMHCNGRFLSNHMLQLHYKSQCKNTIKRHFCRRCPLVFMWEKNLQLHFIMEHGQETDSIRRPECIICQKKFANQWEIKRHMSQYHSNDDDVHYCLFCPRTFYSIAHLNAHLTRHPIADVDIKTAEVILNSTCWPNNDKIIKCKLCAQIFDTMADLNEHLSTICSENLCATQHSLANYSITNQKGFELHLEMDSESEKEDEIDTGGQQNKEHKLKLQPYTCYLCDVSYRRKYQMAQHQRSMHNYEDLALKCERCIFRTVCQRILDYHQSNQCFNEEKQYECSDCKFKFMWQENLDNHGSIFHPPKDKCTEEENIIGTKSTNKIVQQSNSKSLPYVFECMACRRHYSNKADYRMHFKNAHFNDTQLTIGSNTKSAKNTTLKTENKHLCAFCGMSFPYNSHLMIHMHRHTGENPFKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -