Basic Information

Insect: Sarcophaga bullata
Gene Symbol: zfh1_3
Assembly: GCA_005959815.1
Location: QOCX01000365.1:133326-194031[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.46 25 5.3 0.4 2 23 76 98 75 98 0.95

2 8 0.0022 0.12 12.6 1.2 1 23 344 366 344 366 0.96

3 8 4.4e-05 0.0025 17.9 1.7 2 23 384 405 383 405 0.97

4 8 1.2e-05 0.00069 19.7 6.4 1 23 414 436 414 436 0.99

5 8 0.00036 0.02 15.1 1.2 3 21 444 462 442 463 0.94

6 8 2.9e-05 0.0016 18.5 0.5 1 23 1110 1132 1110 1132 0.94

7 8 6.1e-05 0.0034 17.5 7.4 1 23 1138 1160 1138 1160 0.98

8 8 0.003 0.17 12.2 4.3 1 21 1166 1186 1166 1187 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.46	25	5.3	0.4	2	23	76	98	75	98	0.95
2	8	0.0022	0.12	12.6	1.2	1	23	344	366	344	366	0.96
3	8	4.4e-05	0.0025	17.9	1.7	2	23	384	405	383	405	0.97
4	8	1.2e-05	0.00069	19.7	6.4	1	23	414	436	414	436	0.99
5	8	0.00036	0.02	15.1	1.2	3	21	444	462	442	463	0.94
6	8	2.9e-05	0.0016	18.5	0.5	1	23	1110	1132	1110	1132	0.94
7	8	6.1e-05	0.0034	17.5	7.4	1	23	1138	1160	1138	1160	0.98
8	8	0.003	0.17	12.2	4.3	1	21	1166	1186	1166	1187	0.96

Sequence Information

Coding Sequence: ATGTTGTCCTGTTTGGTGCCGTCGTCTACAGCACGTTTTGGTCAAGAggataatattattaaacaaaTTCCTTCTTTGGCCTCCAcattgcatcatcatcatcaccagccCAAAACCGGCACCAGTGCTAATGTAGATGATGAAAATTCAAGCGGCATACCAGCTTCATCAGTAAGCGCTTCATCGCCaccacaacaaacacaacaacaaacagaatttaTGGTCTCGTGTCCCCAGTGTCATATACGATTAGCGGGCTTTGAGCCTTTGCGACATCATATAGCCACTGAACATCCTcatgataaattaaatattgaaccCTCATTTCCTAGTCCTCAGGCTGGTGCAGGAATTGAGCCTCATACACCACACAACTATCAAAACCACcagcagcaccagcaccagcaacagcaacaccagcaTCAGCCCTCTTTGGGTTTAGAGAGTGATAATGAGGATAATGAGAGTAATTTAAGTGCACAGGCTGAGCATATGAAAtcctttaacaataataacaacaatagtgaagagaaaaacaacaatagtatTATAACAACgtcacaaacaacaacaacaacaccggcaataacaacaacaacattaagtgCCACACCTTCTTCGCCCACCTCTAAACTAGAAAACCAAACAAGTCCCTCACATAACAGTGGCGGTGAACTGTCGGCAGCGGTAACACCATTTGCGAATGTTGCTGCAGCAGCGGCTGCTGGCCACTTGCCACATAATTTACATCCAGCTGCGGCCGCTCAATTTATGGCGGCTTTGGCcatgcaacagcagcaacaacaacaacagcaaaataatgaaaattcaacACATTTATTGGCTTTCAATGGTCACCAGCATCACCACCTTCCGCTCCACCACAATCCTCATCATCATCCGCTTAATCTGCAGCAACAACATGTCTCGGGTTTTGCTAATGACATGGAGACATTACGTTCCACCTCTAGTCCCGGCAGTTGTGGCGGCAGTGATAATAATTCAGCGTCTAGCAGCAATGGTGGCCCTTATCAGTGTTTGCATTGTACGGCTGTGTTTCAAAATCGCCAAGAATTGGAAAAACATGAACTCCTGCATTCACCCAATGCCAATGCGCAATCGCCCCAGTCACAAAATGGTCTTAATCAAagTTGCAAAATCTGCCATAAAGCTTTCGCCAATGTTTACCGTTTACAGCGCCACATGATCAGTCATGATGAGTCTGCCTTGTTGCGTAAATTCAAGTGTAACCAGTGTGATAAGGCCTTTAAGTTTAAGCATCACTTGAAGGAGCATGTACGCATACATTCCGGCGAAAAGCCTTTCGGTTGTGATAATTGTGGCAAAAGATTCTCACATTCCGGTTCGTTTTCATCTCATATGACATCGAAAAAGTGCATAAGTATGGGCCTCAAGCTAAACAACAGTCGTAACTTAATAAAAAGCCTGGAAAAGAATTCAGGTTTAACATCGCCCAATTCCATTAAACGTTCGTCGCCTGTTAATAAAACCGATTCGAATTTGGCCAATAGTTTAACAAATCCCATGAATTATTTTGCCGGTGATCCTAGTCCCAACACAAATAATCCTTTCTATACAAATCTGTTACCCAAATATCAGGATTATACCGCCATGAATGCTGCCTTGTTGGCTTCGTTTCCTAATCCTTTTTATAGCATGGCATTGGATCCTCGTATACATCCCTATAGCATACAAAGACTTTTGGAATTGACAGCTGTtggccagcagcagcagcatcaagtCCAAAGCGAAGTAAATACTCCTCCTCTGTCGCACAATGAAGAAGACAACGACAAAGATTTACATGTTTGCAATGGTGAAGGGCTACATGAAGAGGATGATTCCTCTGAAGGCTTGGATCTTAATGAGGAAGATAATCCTGATGAACCCAAATTGGTTATGGATTTAGATGACCCGGCTGAAAATAAAACCGAAGAAGAAACCAAAATTACACAGGAATGTCCCTCCATAGTAGAGGAAAATAATGTAGAGCAAACAGAACCCGAAGACTTAAAGGAAACCAAAACTTTCTCCACCACACCACCCTCACTTGTTAAACAAGAAAATGCTGATCCAGTAAAAGAACAACACAGCGACCACATAGCACCCGATGTTATAAATTCACCTACAATAGCCAATATtaagcaagaaaaacaagaggAACCAGAAGAACAGGAAGTACAAGAACAACAGGAAGCCGAGCATCCCGAGGTACaggataatgatgataatgatggctCACAGGAATCATTACATTTACGCTGTAAACGTAAAGTGCGTGTACGCACTGCCATTACcgaagaacaacagcaacaattgaaaCAGCATTACACATTAAATGCACGACCAAGTCGTGAAGAATTTCGTATGATTGCCTCGCGTTTGCAGTTGGATGCTCGTGTAGTGCAAGTATGGTTCCAGAACAATCGTTCACGTGAACGTAAACTCcaatacaacagcaataaactTACATTCCCCTTGCAAATGTCTGTGACACCCATACAGACAACACCATCGTctcaaacatttgaaaattctttggaatctttaaataaatcatcGTTATCCGATGATTTGCCTTTGGATTTGTCAGTTAAGCCTGCGAAAACATCGGGCAATCAACAGCAGCACTCTCCCTTGTATGGCATAGCacctttacaaaataattgtggGAATTCTACGGGCGATATGCAGGAAGCCATGAATCTCAGTCGTAAAATGTCTTCACCCACTATGTCGCCTTCTTCGGCTGCTCAAGTGCCGTCAGTGTTTAAACAACAggctgctgcagcagcagctgctCTATATTTTGCAGCACCCACGCAAGCAACTTGTGCTCCCAACTTGCCGCACAACATACGACAAACCCCCTCACCCATAGAGGCGCCTCTAATGGCACCCCAGCAGACATCAACACCCAGAGGCGCTTCAGGTTTTCCTGCCTTCTCGCAGTTACCTCCCTATATAATGCCCGCTGCCGCTATGGCGGCTGCCCAAAGGTCTCTAATGCCTATGGAAGCTCTATTCCAAATGACACCCAACTCAGCCGACTATGCACGCCAACATTCGCTCATGAACAGTATTAAATTGAATGGTCCTACGCTGGATTTTAGAGGCACAAGTCTAAGTCCCGGCTCAGGAAAGCGATCATGGCGTGATGATGATTCCCGGGTATCACATGAGGATGATTTTGTTatgcaacaccaacagcaacaggcAGATGTTAATGCTGCAGCTTTAATGCCACCAAAACCGAAACGAGCCAAAGCCGAAACTCATGGTCATGCGGGTGATCCCGATTTACCGTTTATTTGCGATCAGTGTGATAAAGCATTTGCCAAACAGAGCTCGCTGGCGAGACACAAATATGAGCATTCCGGTCAACGTCCCTACCAGTGTATGGATTGTCCCAAGGCCTTTAAGCATAAGCATCACTTGACCGAACACAAACGTTTGCATAGCGGCGAAAAGCCTTTTCAATGCTCTAAGTGCCTGAAACGTTTCTCACATTCCGGCTCCTATTCGCAGCACATGAACCACCGGTATTCCTACTGTAAACCCTACAGGGAATAG
Protein Sequence: MLSCLVPSSTARFGQEDNIIKQIPSLASTLHHHHHQPKTGTSANVDDENSSGIPASSVSASSPPQQTQQQTEFMVSCPQCHIRLAGFEPLRHHIATEHPHDKLNIEPSFPSPQAGAGIEPHTPHNYQNHQQHQHQQQQHQHQPSLGLESDNEDNESNLSAQAEHMKSFNNNNNNSEEKNNNSIITTSQTTTTTPAITTTTLSATPSSPTSKLENQTSPSHNSGGELSAAVTPFANVAAAAAAGHLPHNLHPAAAAQFMAALAMQQQQQQQQQNNENSTHLLAFNGHQHHHLPLHHNPHHHPLNLQQQHVSGFANDMETLRSTSSPGSCGGSDNNSASSSNGGPYQCLHCTAVFQNRQELEKHELLHSPNANAQSPQSQNGLNQSCKICHKAFANVYRLQRHMISHDESALLRKFKCNQCDKAFKFKHHLKEHVRIHSGEKPFGCDNCGKRFSHSGSFSSHMTSKKCISMGLKLNNSRNLIKSLEKNSGLTSPNSIKRSSPVNKTDSNLANSLTNPMNYFAGDPSPNTNNPFYTNLLPKYQDYTAMNAALLASFPNPFYSMALDPRIHPYSIQRLLELTAVGQQQQHQVQSEVNTPPLSHNEEDNDKDLHVCNGEGLHEEDDSSEGLDLNEEDNPDEPKLVMDLDDPAENKTEEETKITQECPSIVEENNVEQTEPEDLKETKTFSTTPPSLVKQENADPVKEQHSDHIAPDVINSPTIANIKQEKQEEPEEQEVQEQQEAEHPEVQDNDDNDGSQESLHLRCKRKVRVRTAITEEQQQQLKQHYTLNARPSREEFRMIASRLQLDARVVQVWFQNNRSRERKLQYNSNKLTFPLQMSVTPIQTTPSSQTFENSLESLNKSSLSDDLPLDLSVKPAKTSGNQQQHSPLYGIAPLQNNCGNSTGDMQEAMNLSRKMSSPTMSPSSAAQVPSVFKQQAAAAAAALYFAAPTQATCAPNLPHNIRQTPSPIEAPLMAPQQTSTPRGASGFPAFSQLPPYIMPAAAMAAAQRSLMPMEALFQMTPNSADYARQHSLMNSIKLNGPTLDFRGTSLSPGSGKRSWRDDDSRVSHEDDFVMQHQQQQADVNAAALMPPKPKRAKAETHGHAGDPDLPFICDQCDKAFAKQSSLARHKYEHSGQRPYQCMDCPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01312907;
90% Identity: iTF_01312907;
80% Identity: iTF_01312907;