Basic Information

Insect: Sarcophaga bullata
Gene Symbol: RREB1
Assembly: GCA_005959815.1
Location: QOCX01000432.1:36184-58999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.02 1.1 9.6 1.8 1 21 250 270 250 272 0.95

2 13 0.00035 0.02 15.1 0.2 1 23 282 304 282 304 0.98

3 13 2.5e-05 0.0014 18.7 7.5 1 23 310 332 310 332 0.98

4 13 2.9 1.6e+02 2.8 0.1 2 23 550 573 549 573 0.89

5 13 0.76 43 4.6 2.4 2 19 579 596 579 596 0.97

6 13 0.025 1.4 9.3 0.1 1 23 739 761 739 761 0.97

7 13 0.00024 0.013 15.6 1.0 1 23 771 793 771 793 0.99

8 13 0.00088 0.049 13.9 2.0 1 23 799 822 799 822 0.97

9 13 0.0031 0.17 12.1 2.0 1 23 1190 1213 1190 1213 0.95

10 13 0.00019 0.011 16.0 1.0 3 23 1569 1589 1567 1589 0.97

11 13 0.15 8.5 6.8 6.3 1 23 1595 1618 1595 1618 0.97

12 13 0.089 5 7.6 1.1 3 23 1805 1825 1804 1825 0.91

13 13 0.0014 0.079 13.2 4.8 1 23 1831 1853 1831 1853 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.02	1.1	9.6	1.8	1	21	250	270	250	272	0.95
2	13	0.00035	0.02	15.1	0.2	1	23	282	304	282	304	0.98
3	13	2.5e-05	0.0014	18.7	7.5	1	23	310	332	310	332	0.98
4	13	2.9	1.6e+02	2.8	0.1	2	23	550	573	549	573	0.89
5	13	0.76	43	4.6	2.4	2	19	579	596	579	596	0.97
6	13	0.025	1.4	9.3	0.1	1	23	739	761	739	761	0.97
7	13	0.00024	0.013	15.6	1.0	1	23	771	793	771	793	0.99
8	13	0.00088	0.049	13.9	2.0	1	23	799	822	799	822	0.97
9	13	0.0031	0.17	12.1	2.0	1	23	1190	1213	1190	1213	0.95
10	13	0.00019	0.011	16.0	1.0	3	23	1569	1589	1567	1589	0.97
11	13	0.15	8.5	6.8	6.3	1	23	1595	1618	1595	1618	0.97
12	13	0.089	5	7.6	1.1	3	23	1805	1825	1804	1825	0.91
13	13	0.0014	0.079	13.2	4.8	1	23	1831	1853	1831	1853	0.99

Sequence Information

Coding Sequence: ATGTTAGTCGCCGTTACCAGCAATAGCCAACAACAAAGTGTCCAAAACGATGCTAATATTACAGTTGCAGCAGCtccaacaacatcaactacaacaccaatcaaaaaagaaagaagagactCATCTTCGTCGTTGTCATCGCTGGATGAGCTGAACAATGGTGGTAAGAAATTAAATGCTGTCACCTCAACACCAGTGGTCACAAGTGATGCAACCGTTGCCTGCAGTAATAATGCCATAACGGGAGGTGGCATGAAATGCAACCAGAGACCGGATACAGACAGAGAGCTAATAAGCCTGAATCAACGTATTCAGGAATCAGATGAGACTAATGACTACGATGACGACGAATCGGCTGATGAGAAAATATCTACACAGCCACGTCAACAATTGCACTACAAGCGTCGTTTGAGTAGTCGCAGTCTCAATGATAAAACTGCTAGTGTCTTACTGGAGTATAATGCGGATAATCCCAATTCATTACGCAAGAAATTCCGTTTTAATCGCTATTGCCATAATGCCAATGGCGATGAATCGGGTTTCGTGGATGCCAGCCACTCTAGTCAATTGATGAATGCAACTTCGGCATCCTCATCTCTGGCTGCTGTTGCCTCAATGGTAGTCTCTAATCCAACAAACTCGAATAATGGTTCAAAATCGAATAGTTCAACGGATAGCTCATCGCCTCCCCAAAGCAATGGTAATTCTAGTCCCGAATCCGGTATAGGAGAACGTGAAGACATGAAATACATGTGCCCCATCTGTGATGTAGTATCGCAAACAGCTCACCAGTTCACCAATCATATACGTTGTCACAATTATGCCTCAGGTCATACGGAGAACTTTACCTGCCGTATATGTTCTAAGgtgcttTCATCTGCCTCCTCTTTGGATCGTCATGTTCTAGTACATACGGGCGAAAGGCCATTTAATTGTAAGTATTGTCATCTCACCTTTACCACTAATGGGAATATGCATCGTCATATGCGTACCCATAAACAGCATCAACATACCCATCATCGGCGCAACTCGAATGGAACAAAGTTCAACGCtaacaacagcagtaacaataataacacaaataacacAACATCTACTATAACACCGACAGGAGCgacaaataaaacattactaAACAACGTACAATTATTTACAGCAGCACCAAccacaatgacaacaacagtcTCTATTACTTTGTCAcctacagcaacagcagcagcggcagcaacAGCCACAACTGGAACAACTTTGCCATCCACTGACGAAGTTAGCAGCAATCATAAGATGTCGCCACAAGCAGGTGCTAATGGTAATCGTTTAAATGGTAATGCCAACTTAGAAAGTGATGAAAGTGATGGTGGCTGCTCATCAGATTCATCAGCGGGCCGTATAagtcataacaacaataacaacaacggcaacagcaataataataataataatcacgacaaccaaaataataacaataataatgacttgaaaattaacaacaacaactataaacgTAAACACAGTGAGGATCAAACTCCAACTCATGATTTGGTAGATGAAATCTTGAAAAGACGCCTCAGACCTGATATCTCAGAAAATacgcacaacaacaacaacaacaataacaacattccGGAATTTACTAACGAGTCCATCGTATGCCCCATctgcaatgaaaataattttacagatGTTCAGGCATTAGATCAACACATGGACAGCCGTCATCCGGAAATACCGGcgaaatgtaaaaattgtgaTGTCCTGTTTCGTACCCATCATCAGCTGAGTATACATCCCTGTACGGCCGACATAAAGGGTTCAATTAATCTCTCCTTTAAACAACGTCGTTTAAGTGAATCATCAAACCATGAAATGGATAGAGACCAGCAAGAACCAACAGAAGATCAAGCCCGACAAAGGCATGAACTCTATGAACATTTTAAGAACGCCATGGCTCAAAGTAATTCACCCTCGTCTCATTATAATCATGATCCTGCAGAAGATGATATTAAATCAGAGCCATCCGCTCAGGATTCAAAAGATTTGGCTGACATACAGTCGATATTAAACATGACTGCCTCGTCCAACAACTCGAACTTGCTAAGGAATTTTGAGCAATCGGTTAACACTCCCTCCTCCCAATATAGTTATGATAGGGATGAGGAAGAAGCCCAAGATTCTTTTACGGCTGAATTTCGTAAAATGAAGCTCCTAGGAGAATTCCCTTGCAAGCTATGTAAAGCCGTTTATCCCAACTTGAGAGCTCTCAAGGGCCACAACCGCGTTCACCTAAGTGAGGCTGGCCCAGCTGGTCCATTCCGTTGCAACATGTGTCCTTATTTAATATGTGACAAAGCGGCTTTAATACGACACATGCGCACCCACAATGGCGATCGTCCTTATGAGTGTGCTGTTTGCAATTATGCCTTTACCACAAAAGCCAATTGCGAAAGACATTTGCGCAATCGCCATGCCAAGACAACACGGGAAGAAGTAAAACGTGCCATTATCTACCATCCCTCTGAGGACTCCTCCTGTGATGATACGAACAAGAAGCTGCACATGTTCTCATCGGAATTAGAAGATGAATGCGATTTAATGTCTTATCACCAGCATCAACCCAAAGATCGTTCGACCCCAGTGTCTCATCTCAAAGAACGTTTGACGGCAGGTGAAAGTCTTTCTAGCAAGCCAGTTAAAATTCAAGTGAAAAATTTGGAGGACCTTTTGGATAAATCATCAGCTTCTTCGGGTTATCATGACAGCTACGATAAACATAACATAGACACAGCACAAGCTCCTATTGACATGAGTATGGATGTCTTAGATTTAAGCAAGAAACCCGCTCCTATACCCACTACCGTGCAAGAACCGAAAGTTGAAATAACGCCCACAACGCCCACAATGCCCTTATCTTTACCCTTGCCTTTACCGTTATCACTCGCCAAACCAGACACTATACTTGCTAATGAAATgctcaataataaaatttcaacagagGGTGAACCAAAATTGGATATGTCTTCTTttgaaaaacagcaacaacaattgctgttgGCCCAAAAGCAACTGCTCAATGATCCTACTCAACTAATGCAGCAATTATATTGCAACCTGTTATTCCCACAGTTCCCGCCATTCTTTATGCACAATACTTTTATGACCAATAATTTGgcagattttcaaaaattggcTCCCATTCTCACACGCATGATGGGTGGTGTAGCTGGTGcggcagcagctgcagcagcggTACCTAATGATATGGACAAACCTTCAACTGTAAATGCTCAAATTCCTATCAACTCGCCAAATATGCCACCAATGAATCCATTACTGGCAGAGAAACCTAACACACCCTCTTCACTAGCCTCTATGGCATCTCCCAAGGGTCTAATGTCCCCAAACACAAATCATATATCTATGCCTAGACATTTATTAACAGGTGCTAATCCTTCTCATCACGCTAATATACCGCCCACAATGCTTTCAAACGGTCCTGTAAAAATGGTGCTCAAAAATGGTGTTTTTATGCCGAAGCAAAAGCAGAGACGTTACCGTACCGAAAGGCCCTTTGCCTGTGAACATTGTTCAGCACGGTTCACTTTACGCTCCAATATGGAACGTCacgttaaacaacaacatccacAGTTTTATGCTCAACGGCAGCGTAGTGGCCATCATGTAATGCGTGGTCGTGGTGCTAACAGTGCAGCGAATATGAATAGCATTTCACACATACAGGCAGCTGTAGCCCAGGCTCATTACGGCTCCTCTCCTAATTCAATGAGTTCTCATTCACCAATTTCAGATCAGGTAAAATATGCCATATTAGCACAACAACTAAAGGCCCGTAAAGACACCGATCTGCTACAGCAAGCCTTAGCACATGGATCGAACAGTGTAGCCAATGCGAATATGTTTTCCCAGCAGACGACAAATGTAAGTGGCAGTGGATCAGCAAACCCTTTTGGTTTCAATGTTCATCACACCACTCATCTTCTTAATCAGAATGGCACACCTAATGGTTCCATGGAAGATGATGAACCCAAATTGATTATCGATGAAGATGACGACACAGACGACGACGTAGAAGAAGAGGAAATTGAGGAAATTCCAGACGTTAATGACGAAAACGACGACCACCATGATATAGTTTTGTGTGAAAATCAAGAGATGCAAAATGATACTGAATCGGGAACTGGAATTGGAACAGGTACAGAACATTTGCCGACAACAGTAGAGGAGGTAAAGCTCAAAACAAAAGAACCTCAGGAAACGGCTAAAAAAGTAGCCGAATCCATATTGGAACAGGCTATTAAGGCTAAGCAAACAATGAGCTCATTTAGTAAAACAACTGAAACACCCACTACAGTAACTTCCACCACCAATAGCAGCATGAAAACCATGATTGCTCAAGCACCGGCAGTAGGTAAATTCCTTAAGGAAGTGGCCAGTTCTTCGTTTAAAGATGAATCTCAGGACTTGGCTTCTGTATCAGAACTAGTCGATAATGCCACCAATAATGCAGTATCTTTCAATAGCTATTTCCGCCCCTCGGATGTGGCTAATCATATGGAACCCAGTGATGAAGATGGTCTGGTAGCATCTTCTGCCAGTGAAAGTAATAACTCGGGAGCCGAAGATACTGTAAGCTCGGAAAAACCTAAAAAGAAATCCGCATATAGTTTGGCACCCAATCGTGTACATTGTCCCTATTGCCAGCGTATGTTCCCTTGGTCTAGTTCTCTGAGAAGGCATATACTAACACATACGGgtcaaaaaccttttaaatgttCGCATTGCCCTCTGCTATTCACCACCAAAAGCAATTGTGATCGCCATTTACTGCGCAAACATGGAGATGTAGAGTCTGCAATGTCGGTATATGTGCCTACCGAGGATGTTAATGAACCCATACCTTTGCCCAAATCCGTAGAAGAAATCGAAAGAATGCAAAGAGAACGCGAAGAAGAGGAACGTAAACGTAAGGCCGAAGAGCAAAGAGCCCGTTTGGCAAAAGagcaaatggaaaaacaaaaactagaacaagaacaacagcaacagcagcaacagaaacagGCATTTCTTAACCAGTTAGCGGCAACACAATTTCAACAGCAATTTCCTGCAAAGTCAGACTCAGCTAATAGCCAAGTCTCTTCATCGGATTTGCCGTTCAAATGCCACTTGTGCGAAAGTTCTTTTGCCGAGCGTTTACAGTGCCTTGAACACATAAAACTGTTGCACAGCCAAGagtttgctttacttttatCGAAAGGAGCCATCGAAAATGAAGCGGATACAGCTCAGCTAAATGCccacgaagaagaagaaagacaaCAACGCAATGGTGCTGGCAATGATGAAATCGGCAAAGGCGGGAAATATCCGGACTATAGTAATCGTAAAGTTATATGTGCATTTTGTATGAGACGTTTCTGGTCTACTGAAGACTTACGCCGGCACATGCGCACTCACTCTGGTGAGCGGCCTTTCCAGTGTGAAATCTGTTTAAGGAAATTCACATTGAAGCATAGCATGTTGAGACATATGAAGAAGCACAATGGTCTACATATGAATGGAGGCTCTCAGAGCAATAATGATAATTTAGCTAACGGTAATTCGGGTTCTGATTATTCCGATGACGAACAGCAAGTGAGCAGTAATCCTTTACCCAGTACAACAGGTTTAACACTGCCTGCTAACAATATAAGTGCTTTGTTTATGGGTTCGAAATTCCAggcattattaaataaaaccagTGAATGGCGTAATGGCAACTGTTTAAATATGTTGCGTGAGGGCAAAGAGAACAATGCAGAGGATACAAATACGCCACAACCAAACTCATCAGATTTGATTGGCAATCTGTTGGGCATCAGTGATCAGGGTATATTGAATAAGTTAATGTCCTCACCCGATGAAGCCGCCAAACTATTGggagttgaaaaataa
Protein Sequence: MLVAVTSNSQQQSVQNDANITVAAAPTTSTTTPIKKERRDSSSSLSSLDELNNGGKKLNAVTSTPVVTSDATVACSNNAITGGGMKCNQRPDTDRELISLNQRIQESDETNDYDDDESADEKISTQPRQQLHYKRRLSSRSLNDKTASVLLEYNADNPNSLRKKFRFNRYCHNANGDESGFVDASHSSQLMNATSASSSLAAVASMVVSNPTNSNNGSKSNSSTDSSSPPQSNGNSSPESGIGEREDMKYMCPICDVVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNANNSSNNNNTNNTTSTITPTGATNKTLLNNVQLFTAAPTTMTTTVSITLSPTATAAAAATATTGTTLPSTDEVSSNHKMSPQAGANGNRLNGNANLESDESDGGCSSDSSAGRISHNNNNNNGNSNNNNNNHDNQNNNNNNDLKINNNNYKRKHSEDQTPTHDLVDEILKRRLRPDISENTHNNNNNNNNIPEFTNESIVCPICNENNFTDVQALDQHMDSRHPEIPAKCKNCDVLFRTHHQLSIHPCTADIKGSINLSFKQRRLSESSNHEMDRDQQEPTEDQARQRHELYEHFKNAMAQSNSPSSHYNHDPAEDDIKSEPSAQDSKDLADIQSILNMTASSNNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDSFTAEFRKMKLLGEFPCKLCKAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYLICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDTNKKLHMFSSELEDECDLMSYHQHQPKDRSTPVSHLKERLTAGESLSSKPVKIQVKNLEDLLDKSSASSGYHDSYDKHNIDTAQAPIDMSMDVLDLSKKPAPIPTTVQEPKVEITPTTPTMPLSLPLPLPLSLAKPDTILANEMLNNKISTEGEPKLDMSSFEKQQQQLLLAQKQLLNDPTQLMQQLYCNLLFPQFPPFFMHNTFMTNNLADFQKLAPILTRMMGGVAGAAAAAAAVPNDMDKPSTVNAQIPINSPNMPPMNPLLAEKPNTPSSLASMASPKGLMSPNTNHISMPRHLLTGANPSHHANIPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGANSAANMNSISHIQAAVAQAHYGSSPNSMSSHSPISDQVKYAILAQQLKARKDTDLLQQALAHGSNSVANANMFSQQTTNVSGSGSANPFGFNVHHTTHLLNQNGTPNGSMEDDEPKLIIDEDDDTDDDVEEEEIEEIPDVNDENDDHHDIVLCENQEMQNDTESGTGIGTGTEHLPTTVEEVKLKTKEPQETAKKVAESILEQAIKAKQTMSSFSKTTETPTTVTSTTNSSMKTMIAQAPAVGKFLKEVASSSFKDESQDLASVSELVDNATNNAVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSSEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAMSVYVPTEDVNEPIPLPKSVEEIERMQREREEEERKRKAEEQRARLAKEQMEKQKLEQEQQQQQQQKQAFLNQLAATQFQQQFPAKSDSANSQVSSSDLPFKCHLCESSFAERLQCLEHIKLLHSQEFALLLSKGAIENEADTAQLNAHEEEERQQRNGAGNDEIGKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGLHMNGGSQSNNDNLANGNSGSDYSDDEQQVSSNPLPSTTGLTLPANNISALFMGSKFQALLNKTSEWRNGNCLNMLREGKENNAEDTNTPQPNSSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00998075;
90% Identity: iTF_01315844;
80% Identity: -