Basic Information

Insect: Sarcophaga bullata
Gene Symbol: -
Assembly: GCA_005959815.1
Location: QOCX01000071.1:499359-503283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00023 0.013 15.7 0.2 2 23 264 285 263 285 0.97

2 8 0.0087 0.48 10.7 2.8 2 23 292 313 291 313 0.96

3 8 1.2e-06 6.6e-05 22.9 1.1 1 23 319 341 319 341 0.97

4 8 6.5e-06 0.00036 20.6 1.5 1 23 347 369 347 369 0.97

5 8 5.1e-06 0.00028 20.9 3.0 1 23 374 396 374 396 0.98

6 8 0.00011 0.0063 16.7 1.2 1 23 402 425 402 425 0.97

7 8 4.1e-07 2.3e-05 24.3 0.6 1 23 430 453 430 453 0.97

8 8 0.0015 0.081 13.2 0.8 1 23 460 483 460 483 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00023	0.013	15.7	0.2	2	23	264	285	263	285	0.97
2	8	0.0087	0.48	10.7	2.8	2	23	292	313	291	313	0.96
3	8	1.2e-06	6.6e-05	22.9	1.1	1	23	319	341	319	341	0.97
4	8	6.5e-06	0.00036	20.6	1.5	1	23	347	369	347	369	0.97
5	8	5.1e-06	0.00028	20.9	3.0	1	23	374	396	374	396	0.98
6	8	0.00011	0.0063	16.7	1.2	1	23	402	425	402	425	0.97
7	8	4.1e-07	2.3e-05	24.3	0.6	1	23	430	453	430	453	0.97
8	8	0.0015	0.081	13.2	0.8	1	23	460	483	460	483	0.97

Sequence Information

Coding Sequence: atgaaaataacctGTAGGATATGTAAAATCCAACAAGGTGAATTTTTTACATTGGACAGTGAAGTTCCTATTTATGGACAAGAGCGAAAACTTCTTGAAATCTTCAACAAATGCTTTCAATTGAATGCGCTGTTACAAGATCCTTTGCCCCAAGTGGTTTGTCTCGCATGCTTGGACAAGTTGACAGAATTTTACGAATTCCAATTAAAAGCTGCAAAATCCGATACTGAATTAAGAGAAGTCTTGcagaaggaaaattttattaaaaccgaACAATTCGAACCTCTAGCAGAGACAGGCAAGTCATTGGTAGATGTGAAGACTCTCTTGGATAATAAAACAGAGAAGCAGGAGTTTGAATCCGCAGATGATGACAATGACTTTTATGATGAAGAAGAAGTAAGTTATAAGGGAGATGAAAACAATTTACCAGAAGACGATGAAGAAGATGTGGAAGATACAGATATTCTGTTCGAATTGTATAGTAAAAATGACAGTGGTTTGGACAATtatatgaaatttgaatataacAATGATTCTTCTCAAGAAACTGCCATAATTGAGTATAATAACAGTCagaaaaataacacagaaaTTGATCGAATTGACCAAATTCTTCCCTCTGCAACGTCCAAAGAAGAGAACAAGGATAATGGAAGTTTGAATCGCCAGGACACGCCTGTAGAAGTAGAAAAGCCAACTATAGAAATATCCAGGCTTAAATTACACGACCAAAATATTGATGAGCGAATTGTAATGTTGGAACCATTAGTTGAAGTTAGAAAGTGGCAGTGTCCAGATTGTGgtcgaaaatatttaacagaagAGAAATTAGAGCAACATCAGCGTCTTCACAAAACATCCGATGCCTGTCAGTGCGAAATTTGTGGTTGCGAACTTAATAGTCTCTATGAATATCGTGAGCACATGAAAGATCATGGTACGGAACGTAAATTTTCTTGCGAATTTTGCGATAAGAATTTCAGCACTCGAGCAAATCTAAAGGCACATCTTTTCGTTCACACTAATCTGCGCccatttaaatgtgaaatttgtGGCAAGACATTCCAAcagaaatcgattttaaaaactcatatgACTTTACATACGGGTAAACCATTTGAATGTTCGCTATGTAGCCGACGTTTTAGCCGCACTGcacatttaaatattcacaTGCGTCAACACAACAATATACGGCCGTATAAATGTCCTCAATGTCCTAGTGCTTATATGCAAAAATCTCATTTAGATCGTCACATATCCAGTTCACATTTGGGAGTGAGATTCCAGTGTACAGTTTGTGGCAAAATGTATACCAAAAAGCCGTCATTAAATACTCATATGCGGGAGGCGCACTGTAAAACAGTGTCTTTGTACAATTGTGAAGTTTGTGACATGGACTTTGCCAAACAAAAGGGatTATACTACCACCTGAAGTCTAAGCATCCCGATTACAAAAAGAGCAAACCATTGTCAATTTCCGCTACAAAAGGTAAAGCGGCAATAAGACCCGCCGTTACCTTGATTACATTGTCTTGTGAAACTTGTGGACAGGGTTCCAAGATATTGGccatacatattttaatgttaacattAGGCGGGGGCATTGTTAATGCCGAAGGTTTTTGTACTAAAGGCAAAATTTCTCGAAATACTTTACCGGGTTTCGGATCATTTATATTTGATAGCTGGTTTAGCAGCAAAGTTGTCAATGTGTCTGGCTGA
Protein Sequence: MKITCRICKIQQGEFFTLDSEVPIYGQERKLLEIFNKCFQLNALLQDPLPQVVCLACLDKLTEFYEFQLKAAKSDTELREVLQKENFIKTEQFEPLAETGKSLVDVKTLLDNKTEKQEFESADDDNDFYDEEEVSYKGDENNLPEDDEEDVEDTDILFELYSKNDSGLDNYMKFEYNNDSSQETAIIEYNNSQKNNTEIDRIDQILPSATSKEENKDNGSLNRQDTPVEVEKPTIEISRLKLHDQNIDERIVMLEPLVEVRKWQCPDCGRKYLTEEKLEQHQRLHKTSDACQCEICGCELNSLYEYREHMKDHGTERKFSCEFCDKNFSTRANLKAHLFVHTNLRPFKCEICGKTFQQKSILKTHMTLHTGKPFECSLCSRRFSRTAHLNIHMRQHNNIRPYKCPQCPSAYMQKSHLDRHISSSHLGVRFQCTVCGKMYTKKPSLNTHMREAHCKTVSLYNCEVCDMDFAKQKGLYYHLKSKHPDYKKSKPLSISATKGKAAIRPAVTLITLSCETCGQGSKILAIHILMLTLGGGIVNAEGFCTKGKISRNTLPGFGSFIFDSWFSSKVVNVSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01314090;
90% Identity: iTF_01314090;
80% Identity: -