Basic Information

Insect: Sarcophaga bullata
Gene Symbol: -
Assembly: GCA_005959815.1
Location: QOCX01001518.1:44-12118[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.009 16.2 0.1 3 23 23 43 22 43 0.97

2 12 0.016 0.87 9.9 0.1 2 23 52 74 51 74 0.94

3 12 3e-05 0.0017 18.5 0.2 1 23 82 105 82 105 0.97

4 12 8.5e-07 4.7e-05 23.4 0.7 1 23 111 133 111 133 0.98

5 12 2.9e-06 0.00016 21.7 1.2 1 23 139 162 139 162 0.98

6 12 0.5 28 5.2 0.2 3 23 461 482 459 482 0.88

7 12 2.5 1.4e+02 3.0 1.1 1 8 507 514 507 515 0.89

8 12 5.2e-05 0.0029 17.7 0.2 3 23 527 547 526 547 0.97

9 12 0.05 2.8 8.3 0.2 3 23 557 578 555 578 0.93

10 12 1e-05 0.00058 19.9 0.2 1 23 586 609 586 609 0.97

11 12 4e-07 2.2e-05 24.4 0.7 1 23 615 637 615 637 0.98

12 12 3.2e-06 0.00018 21.6 1.3 1 23 643 666 643 666 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.009	16.2	0.1	3	23	23	43	22	43	0.97
2	12	0.016	0.87	9.9	0.1	2	23	52	74	51	74	0.94
3	12	3e-05	0.0017	18.5	0.2	1	23	82	105	82	105	0.97
4	12	8.5e-07	4.7e-05	23.4	0.7	1	23	111	133	111	133	0.98
5	12	2.9e-06	0.00016	21.7	1.2	1	23	139	162	139	162	0.98
6	12	0.5	28	5.2	0.2	3	23	461	482	459	482	0.88
7	12	2.5	1.4e+02	3.0	1.1	1	8	507	514	507	515	0.89
8	12	5.2e-05	0.0029	17.7	0.2	3	23	527	547	526	547	0.97
9	12	0.05	2.8	8.3	0.2	3	23	557	578	555	578	0.93
10	12	1e-05	0.00058	19.9	0.2	1	23	586	609	586	609	0.97
11	12	4e-07	2.2e-05	24.4	0.7	1	23	615	637	615	637	0.98
12	12	3.2e-06	0.00018	21.6	1.3	1	23	643	666	643	666	0.98

Sequence Information

Coding Sequence: TATGCTACCTCCTACCTATTAAAATTACACAATGAAGCtgtacatttaaagaaatttgtcaaGATTTGTTATATCTGTGGCAAATCGATTGCTTCCAGTGCTGATTACAAAGTGCATATGAATAAACATGAAGGTATACCAGCACCTGATATCAGCTGCGATGTATGCGGTCTTCGGCTGGCAAGTGAAAGGGGTCTAAAACGACATAAAGAATCTCAACATCCAGTTGGTGGTAAAAAAGAGCATCCCTGCCCCATATGCCCTAAAGTATCGCCTACAGTAAAAGCACTTAAAAAACACATAAATACTATGCACGAAAAGGGCCTCGATCACAAATGTACCATATGTGAGAAAGCTTTCAAGAGGGCAGATGGTTTAAGAGAACACATGGCCTCACATACCGGCACAGCTTTATACACATGCCCATGGTGTCCAAAAACTTTCAATTCCAATGGTAATATGCATGCCCATCGAAAAAGAGTACATCCAAAGGAtaaatgttttgattttggtGTATTAATGCTCCTTTTGAAAGATTCCACAATGGATGCTTGTTTACTGTGTTTGGAACTAAATAAGGAGCTGTTAGAGACCATAAAATCTGATTCTGCAAAATGgcaagaattgaattttaaagatatCGTAGAGAAACACTTTTGGCCAATGAATATTACACAAAACTCCTGGATATGTTTAGCCTGCTGGCAGGAAGTAGACGATTTTCACAAATTCTATATGCGTATAGAGGAAGCACATACTAATTTtggaagaataaaaatagagGACCTCACTCAACTGCCAGAATGTAAAGAGCTTGAACTACCAATACAAAAGCTAAAAACAGGAGACTGTGACGATGGAGAAAAAGATAATTTCAAGTATTGCTTCCTGGAGCCAGAAATATTAATAGATCAACCAAAGCCCGAGgaaattttgatagaaaaacaaTCACCATTGAAGGAGCCACTAGATGAACTCGATATTGATGATATGCCCCTTAAAGAAGCATGCAAGCGTTTGCGAATGAAAGATAACATTGACAATGAAGATCCattagaaaaatcgaaaaaacctAGAGTATGTAAAACAAAgacgaaaaaaattcttagcaGAAAGCGTTCAAGAGAAAAACCCGATAccgcaattaaaaaaattcaaggagCATCAGAAGTTAAAGAGGAACCCATAGATCACAATGACAATAATGATAGTGAAAGTAGTGATAGTGACGACAACGATTATAACCACGATGAGGAATATCAATCGGGCAAAGACTCTCCAGAAACTACTGAACGTAAGAAACGTAAATCCTATAATAAACATCGTACCAATCGTAAGGAAAACGATAAATTTATAGCGGAGCACTTTAAGCAAATGTTTTGTGATCTTTGCCAAATACCATTTGAAGATTTTCCATCCATGCAGAGACATTTTACGGAGATCCATAAACAAAGAGGTTACTTTAGCCTATGTTTTGAGATTCACAAGTTAACACATCTGccggaagaagaaaaaaagtttcccTGTGAGGATTGTGGTAAAAAACAGGCGGTACATCTAAaacgttttgttaaaatttgttacatATGCGGCAAATCGATTAATACCAGCGCTGAATTCAGAGCTCATATGAACAAGCATGAAGGCATTCCAGCTCCAGTTATAAATTGTGATGTATGTGGTTTGCGTTTGACTAGTGAAAGAGGATTAAAACTGCACAAAGAAAGTCAGCATCCAGTTGGTGGCAAACAAGAGCATCCTTGCCCCATATGTCCGAAAGTATCACCCACCCTTAAGGCCCTCAAAAAGCACATAAATACGATGCATGAAAAAGGTTACGATCACAAATGTAGTATATGCgagaaagcatttaaaagagCTGAAGCACTTAAGGAACATATGGCAACTCATACTGGTACCACTTTATATACATGCCCTTGGTGTCCCAAAACCTTCAACTCGAATGGTAATATGCATGCTCATCGCAAAAAGATACACCCAAAGGAAtgggaagaaacaaaaatgcaaaaatatgcaacacaTGTACCAAATGCTCcagaaatttga
Protein Sequence: YATSYLLKLHNEAVHLKKFVKICYICGKSIASSADYKVHMNKHEGIPAPDISCDVCGLRLASERGLKRHKESQHPVGGKKEHPCPICPKVSPTVKALKKHINTMHEKGLDHKCTICEKAFKRADGLREHMASHTGTALYTCPWCPKTFNSNGNMHAHRKRVHPKDKCFDFGVLMLLLKDSTMDACLLCLELNKELLETIKSDSAKWQELNFKDIVEKHFWPMNITQNSWICLACWQEVDDFHKFYMRIEEAHTNFGRIKIEDLTQLPECKELELPIQKLKTGDCDDGEKDNFKYCFLEPEILIDQPKPEEILIEKQSPLKEPLDELDIDDMPLKEACKRLRMKDNIDNEDPLEKSKKPRVCKTKTKKILSRKRSREKPDTAIKKIQGASEVKEEPIDHNDNNDSESSDSDDNDYNHDEEYQSGKDSPETTERKKRKSYNKHRTNRKENDKFIAEHFKQMFCDLCQIPFEDFPSMQRHFTEIHKQRGYFSLCFEIHKLTHLPEEEKKFPCEDCGKKQAVHLKRFVKICYICGKSINTSAEFRAHMNKHEGIPAPVINCDVCGLRLTSERGLKLHKESQHPVGGKQEHPCPICPKVSPTLKALKKHINTMHEKGYDHKCSICEKAFKRAEALKEHMATHTGTTLYTCPWCPKTFNSNGNMHAHRKKIHPKEWEETKMQKYATHVPNAPEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -