Sbul014465.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sarcophaga bullata
Gene Symbol
ZNF275
Assembly
GCA_005959815.1
Location
QOCX01000256.1:152228-155910[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00019 0.011 16.0 0.5 1 23 188 210 188 210 0.96
2 15 0.00011 0.0062 16.7 0.1 1 23 216 238 216 238 0.98
3 15 5e-07 2.8e-05 24.1 0.3 1 23 290 312 290 312 0.98
4 15 1.6e-05 0.0009 19.3 0.3 1 23 427 449 427 449 0.96
5 15 0.064 3.6 8.0 1.0 1 23 455 477 455 477 0.93
6 15 3.3e-06 0.00018 21.5 0.3 1 23 494 516 494 516 0.98
7 15 0.016 0.87 9.9 0.5 1 23 525 548 525 548 0.95
8 15 0.00054 0.03 14.5 4.9 1 23 554 576 554 576 0.98
9 15 0.00015 0.0082 16.3 0.4 2 23 583 604 582 604 0.97
10 15 1.8e-08 1e-06 28.6 0.7 1 23 610 632 610 632 0.96
11 15 0.0015 0.084 13.1 1.3 1 23 638 660 638 660 0.98
12 15 3.3e-05 0.0018 18.4 1.6 1 23 666 688 666 688 0.96
13 15 2.5e-05 0.0014 18.7 3.2 1 23 694 716 694 716 0.99
14 15 1.7e-06 9.7e-05 22.4 0.7 1 23 722 744 722 744 0.99
15 15 4.5e-05 0.0025 17.9 0.3 1 23 750 772 750 772 0.97

Sequence Information

Coding Sequence
atgtCCAGTGACTTATTATCTAAATGCCGTACTTGCCTAAGCGATTCCAATTTCTTCCATCAACTGTTCGATTATGTAGAtgagaattacaaaatattggaGATGTTGGAGGGCATAGTGCCTCAAATTGATATTAAATGTAATACACAATTCTCCACTGTAGTATGCCAACCGTGTGTGGATAAATTGCTTACTAGCTATAAATTCCAGCAGCTGTGCATAGAAACCAATAACCGTTTACATGATTTGCTGGGCATTACTGTGTTTGAGGCAGAGCCCAAGGTGGAGAAGACATTAGATCCTTTGACGGGtgagacaaattttaaaatgaaacaagagGTGGACGATGATGCCAGCTATGAACGCGAAATAAATGCTGATGAATTTGAAGCGGCTATAAGATCAGATCATAAAAATGAGTGGGAGCCTTTGGTCAGTGACAGTGATACAGATTCCAGcaaTGAAAAGTTGTCAGTTCTTAGAGAAAGATCAGCGAAGAAACCTCCTTTGAAAGTGGAACTCTCGGAGAAattaaacaaaatcaaaattcgtataaaaaatttccCCTGTAAAGAATGTGGCAAAGTGCTGAATAGTTATTATCGCCTTAAAAGACACGAAGCGATGCACATGCAAAAAGCTGAATATCCATGTGAAACGTGTAATACGACTTTCGCAGCTGAAAAGGCTTTAAAAGCTCACATATTAACTCATAAAATAGAACATAATAATAGTGCAGGCATTAGTAGTGATCAAAATGAAGCCAATGAAATTAATGACACTAAAGAACTTGTggacaacaaagaaaatgacGACGAAGATAGCAAAGAGAATATGGAAGATCCGGactcaaaagaaacttttacaTTTCAGTGCCCGGATTGTCCAAAATCGTTTGAAAAGAAAGCTTCTTTATCGGCTCACTATAAAGTGCATAGAAAGAAACATGCgaataaattgaataacaaaGACAAAAAGGTTGAAcctaaatttgaagaaaacaaaacggaTGATCAAAAAGAAGCTGCTGAAGACAAAGAGCccaatgtttttattaaagaggAATTGGAAATAACGCCGCAAATATTTGAAGAACCCATGGATGAGTGTGAAACAAATGGTGAatggtttaataataataacgaagaGTCTGAtaGTGACAATACGGAAAAGAATGTTTTTGTCAAACCAATTAAATCcaccaaaaatattgattttgtagACACCGGCATAGGTGAAGTagaaaaGCccaataatagcaataaaagAAGTGGTAGTTTTCCCTGTGAAGTGTGCGGCAAGATTTTCGATCGTCCTTATCGTTTAAAACGCCACAGTTCTGTCCATTGCCTTACTAGGCCGCATGAATGTGAAATTTGTAAGTATCGCTTTGCCAccgtaaacattttaaaggcaCATTTGTTTCAACATGAAAACGATACTATTGGCAATTTAACTGGCCAGTCACGCCCGGAAGGCTTTAAATGTCCCGACTGTCCTAGACGTTTTGAAAAACAAGCATCCCTTTCAGCTCATCGCCAGATACATACACGCAATGCATCAGAGGCCAATTATCCATGCATGGTATGCCAGCGTAACTTTATGTCGGTGAGATCTCTAACCGAacatataacaaataaacatcCCGAAGTGGAAAAACACAAATGTGATCAATGCGACAAAACTTTTGTTCTACACGCCCACTTGGTTGAGCATTTAAACCGTcataaaggcaataaaaatttggtgTGTCTGATATGCGAAAAGGAATTTGGCTATACGAATACTTTAAAAGAACATATGCGCACACATAGTGGTGAAAGTCCTTATTTATGTCCGCAGTGTGGCAAAACTTTCCGTAGTGCTAGTAATTTACGCCAGCATATGGAAAGACATACCGGCTTAAAGAAATATCAATGTCCTGAATGTCCCAGTCGTTTTAACTGTCGATCAGACTTGATAAAACACGCCTCAACACATACGAATGCTAAGCCTCACGTCTGTGATATATGTGGCTCACGCTTTACCAGAGCATACTCTTTGCAAAAGCACAAACTCCTGCATTCGGGTGAGAGGCCATTTAAATGTGATCAATGCAGTATGACttttgctaTTGTCTATCACTTAAGACGGCATATGCGTACCCATACTGGAGAGAAGCCATACAAGTGTAAATACTGTGAAAGAGCCTATGCCGAGAGTGGAGATTTGACAAAACATTTGAGAACGCATGTAGGAGAAAATACTTATATGTGTGATCAATGTCCTATGGCCTTTAAATATCAGGCAGAATTACGACAACATCAATCGGAACATTATAAAATGGCTCAAAAACTACTACAGCAGGCACAAAAAATGTCCGATGAAGCACAACAGCATGAGATAGATGACAGCCAACAGGTGCAGTTAAAGGATCAACAGCAGCAATTGAACATGACAGAACAAAATAACCAGCATATAATAAAAGCCGATCAGAGTCATAATCTACCTTTAGGTATGGCCAGTTATGCTCAGCAAATGCCCTTATTAGATCATAGACAACAGTTGCTGCCTTTagggcaacaacaaaatcaacaggTCAATACCGAAAATGTTATATCACGCCAGGATAATTTAGATATAAAGAATCTCAATAATTGA
Protein Sequence
MSSDLLSKCRTCLSDSNFFHQLFDYVDENYKILEMLEGIVPQIDIKCNTQFSTVVCQPCVDKLLTSYKFQQLCIETNNRLHDLLGITVFEAEPKVEKTLDPLTGETNFKMKQEVDDDASYEREINADEFEAAIRSDHKNEWEPLVSDSDTDSSNEKLSVLRERSAKKPPLKVELSEKLNKIKIRIKNFPCKECGKVLNSYYRLKRHEAMHMQKAEYPCETCNTTFAAEKALKAHILTHKIEHNNSAGISSDQNEANEINDTKELVDNKENDDEDSKENMEDPDSKETFTFQCPDCPKSFEKKASLSAHYKVHRKKHANKLNNKDKKVEPKFEENKTDDQKEAAEDKEPNVFIKEELEITPQIFEEPMDECETNGEWFNNNNEESDSDNTEKNVFVKPIKSTKNIDFVDTGIGEVEKPNNSNKRSGSFPCEVCGKIFDRPYRLKRHSSVHCLTRPHECEICKYRFATVNILKAHLFQHENDTIGNLTGQSRPEGFKCPDCPRRFEKQASLSAHRQIHTRNASEANYPCMVCQRNFMSVRSLTEHITNKHPEVEKHKCDQCDKTFVLHAHLVEHLNRHKGNKNLVCLICEKEFGYTNTLKEHMRTHSGESPYLCPQCGKTFRSASNLRQHMERHTGLKKYQCPECPSRFNCRSDLIKHASTHTNAKPHVCDICGSRFTRAYSLQKHKLLHSGERPFKCDQCSMTFAIVYHLRRHMRTHTGEKPYKCKYCERAYAESGDLTKHLRTHVGENTYMCDQCPMAFKYQAELRQHQSEHYKMAQKLLQQAQKMSDEAQQHEIDDSQQVQLKDQQQQLNMTEQNNQHIIKADQSHNLPLGMASYAQQMPLLDHRQQLLPLGQQQNQQVNTENVISRQDNLDIKNLNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01314833;
90% Identity
iTF_01314002;
80% Identity
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