Sbul005822.1
Basic Information
- Insect
- Sarcophaga bullata
- Gene Symbol
- -
- Assembly
- GCA_005959815.1
- Location
- QOCX01000074.1:31281-48143[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 37 7.7e-05 0.0043 17.2 1.9 2 23 237 259 237 259 0.96 2 37 0.43 24 5.4 0.0 2 22 267 287 266 289 0.88 3 37 0.00026 0.014 15.5 5.0 1 23 308 331 308 331 0.97 4 37 0.0021 0.12 12.7 0.8 1 23 353 375 353 375 0.95 5 37 0.0001 0.0058 16.8 2.9 1 23 381 403 381 403 0.96 6 37 5e-07 2.8e-05 24.1 0.5 1 23 409 432 409 432 0.98 7 37 2.5e-05 0.0014 18.8 0.9 1 23 438 460 438 460 0.99 8 37 0.0029 0.16 12.2 3.6 2 23 648 670 648 670 0.96 9 37 0.083 4.6 7.7 0.0 2 23 678 700 677 700 0.91 10 37 0.00014 0.0076 16.4 3.2 1 23 719 742 719 742 0.96 11 37 0.00054 0.03 14.5 0.5 1 23 764 786 764 786 0.95 12 37 0.00014 0.0078 16.4 0.8 1 23 792 814 792 814 0.96 13 37 4.8e-07 2.7e-05 24.1 2.5 1 23 820 842 820 842 0.98 14 37 1.6e-05 0.00087 19.4 3.6 1 23 848 870 848 870 0.98 15 37 0.26 14 6.1 0.5 1 15 876 890 876 893 0.83 16 37 2.2e-06 0.00012 22.1 0.3 1 23 901 923 901 923 0.96 17 37 0.00071 0.039 14.2 0.6 1 23 929 951 929 951 0.95 18 37 0.011 0.6 10.4 0.1 1 17 957 973 957 974 0.91 19 37 4.2 2.4e+02 2.3 2.5 12 23 1203 1214 1198 1215 0.84 20 37 0.14 7.6 7.0 5.0 1 23 1238 1261 1238 1261 0.93 21 37 0.29 16 5.9 0.6 2 23 1283 1305 1282 1305 0.96 22 37 1.6 87 3.6 4.1 2 23 1313 1335 1312 1335 0.95 23 37 0.00099 0.055 13.7 1.7 2 23 1442 1464 1442 1464 0.97 24 37 3.8e-06 0.00021 21.3 2.1 3 23 1473 1494 1472 1494 0.97 25 37 1.2 68 4.0 4.0 1 23 1516 1538 1516 1539 0.95 26 37 0.00031 0.017 15.3 1.4 1 23 1545 1567 1545 1567 0.96 27 37 0.0017 0.094 13.0 5.2 1 23 1573 1595 1573 1595 0.99 28 37 2e-08 1.1e-06 28.5 2.4 1 23 1601 1623 1601 1623 0.99 29 37 0.00039 0.022 15.0 0.3 2 21 1630 1649 1629 1653 0.89 30 37 0.0047 0.26 11.6 3.0 2 23 1681 1703 1681 1703 0.96 31 37 0.095 5.3 7.5 0.0 2 23 1711 1733 1710 1733 0.91 32 37 2.9e-05 0.0016 18.5 6.2 1 23 1752 1775 1752 1775 0.96 33 37 2.9e-06 0.00016 21.7 0.3 1 23 1800 1822 1800 1822 0.96 34 37 2.9e-05 0.0016 18.5 0.8 1 23 1828 1850 1828 1850 0.96 35 37 3.5e-07 2e-05 24.5 1.5 1 23 1856 1878 1856 1878 0.98 36 37 1.6e-05 0.00089 19.3 3.8 1 23 1884 1906 1884 1906 0.98 37 37 0.021 1.2 9.5 1.8 1 19 1912 1930 1912 1936 0.94
Sequence Information
- Coding Sequence
- ATGGAAATGGAAAACACTAATGTTGGCATTTTCCAAGAACAACAGACTAAAATCGAttgtaatcccatatttaaatacaaaatgacgACTATAATATCTCCTGAAAGAGACACAACCATTGATAAATGCCGATGTTGCACTAATCCATCCGTAAACTTTATAAAACTGGAAACGTCCATAAAAACAAGTGAAGGATTGGAGAAAACATACAGAGACCTTTTGtatgaaataacaaattttcaaATACCCGTATACCAGGAGCATGTTATGCCACAACAAATATGCCATAAGTGTAGTCAACAGTTGAAAAGTTCATATAAATTCTTTCAGCAGGCCTGTCAAGTATCAAGACAATATCTGCAAATGGCCTACGAGCAACCAACTTCTCCAGTAGAcgttaaaaatattgaacatttaGAAGAATCACTTATAGAAATAAACGAATCTGTTTACGACAGCAAATTAGAAGCAAAAATAGAAGTAGAACCTTTGATTATAGAAGAGTTTAACACAGAAATCAAACAAGAAATAGAGGACAATGAATTATTAATAGAGGGAAATCCACCAAAAGAGGAATATGCCGAAGACAGCAGTTCAGAGAATCCTAATCCTACTTTCCCATTAGAAGATGATGAGCACGATGATAGCGAAGAGCCGGAATCTCTTAATGGAAATGAAGATTTTCTTGCGAATGAAGCCTTAGCTAGACGCTGTGATATCTGCCAAAAAGTATATCGCAATAAAAAGTTCCTTAACAATCATATACGTTACACGCATATGCCTGAAGAAGATAAAATGCCTTGTCCTTTGTGCAGTTATAGAGCAAATAGATCCTGGTCTTTAAGAATACATGTTGGCCTAGCACATGGCCAAGACAAGGTTCTGGAATACTTCAAACCTGTGCCGAAGTCCAAAAAAATACATCCTTGTAGTTATTGTTCACGCTCTTATGCACACAAAGAAACCCTTCGTCaacatattaaaactaaacatttgaATAAATCCTCAATTGAAGAAGATGTTTCTGAAACAAAAACCGCTAAACCAAAAAAGAGTTTCCTCTGTACCTACTGTGGTCAAGCGTTCAATTGGAAACACGGTTTAGAAAGTCATATTCTAACACATACAGATGAAAGACCATTTTCTTGTGATATTTGTAGTAAAACTTTTAAGCGTCATAAAGACTTGCAGCTGCATCGTGTTATACACAGTGATGAAAAGCCATATCAATGTACTGAATGTGGCAAAGCATTTAAACGTGtcgataaattaaaaactcatataaaaattgttcattcaGATTTGAGACCTTATAAATGTAGTGAATGCGAACAAtctttcaaatatcaaaatgttCTAAGAGTACACATGAACATACATACAGGACATTCTCTTACAAAACCTGTGGGGAAGCATTTTCGACGGGAACATCATGAaggtttaaagaaaacatacaaggacattttaaatgaaatcacaaATTTCACTATACCTACTTACCAAGAATTTATAATGCCCCAACAAATTTGCCGAAAATGTTGTAATCAACTAAAAagttcatataaatttattcaagagGCATGTCGAGCTTTGCAACAACATCTACAAATGGCGTTTGACCAACGAAATTCATTAGATGAcgttaaaaatattgaacatttgCAAGAATCACTTATAGAAATAGCAGGGTACAGTACTAAATGCGATGACGAAATGAAACTAGAACCTTTTGCTATTGAAGAATGCggcacaaaaattaaacaagaaattgaGGACAGTGAAATATTAATGGAAGAAAATTTCCTGAAACAAGAAGCTTTGGAAGAAAAAAACATTTTAGAAAACTCAAATACTGATAATACTTTGGAGCATGATGATAGTGATGAACCAGAgtctattaataaaaatgatgattttCTTTCGAATGAACCACTAGCTAGACGCTGTGATATCTGCCATAAAGTATAtcgtaatgaaaaatttctaaaaattcatAAACGTTATACGCATATGCCTGAAGAAGATAAAATTTCTTGTCCTTTGTGCAGTTACAGAGCCAATCGATCCTGGGCTTTAAGAGTACATATGGGTTTAGCACATGGTCAGGACAAAGTTGAGGAATACTTTAAGCCTGTaccgaatttaaataaaacacatccCTGCAGTCTTTGCCCGCGTTCTTATGCACACAAAGATAGCCTGCGACTgcatatgaaaagcaaacatttgaataaaacttcCATCAAGGAAGAATTccacatagaaaaacaaactaaaccaaAAGAACGATTCCTCTGCACCTATTGTGGACAATCGTTTACTTGGAAACGCGGGCTAGAAAGTCATATTTTGACACATTCAGATGAACGACCATTTTCTTGCGAAATTTGTAATAAAGGgtttaaacgttttaatgaTTTGCAATTACATAGAGTCATTCACAGCGATGAAAAACCACATAAATGTTCAGAATGTGGTAAAGCATTTAAACGTGTTGATAAGTTAAAAACGCATATGAGAGTCCATTCGGAATTGAGACCTTATAAGTGTAGCGAATgcgaaaaaacttttaaatatcaGAGTGTTCTAACaacacatatgcatatacacacaGGTCACACGCCATTCACTTGTAAAACCTGTGGGGAGGCATTTTCATTAAGAACATCagtcaaaaaaatattaaaagagaaagaactTTTTCTTTGTACATACTGTGGTCAATCATTTTCTACGAAAGCCGGTCTTGAGAGTCATATTCTAACGCATACAGATGACAGACCATATTCTTGCGACATTTGTGATAAGACTTTTAAACGTCTTAAGATCTTGCAGTTGCATCGTGTCATACATAGTGATGAAAAGCCACATGAATGTCCAGAATGTGGAAAAGCATACAAACGTgttgataaattgaaaattcgtATGGCAGTTCATTCAGAGTTAAGGCCTTACAAAATGAATGAGAAGAGAGTACAAAAGTGCAGGACATGTCTTAAGGATAGTACAAAAACATTTCCTCTTACAAAATCAGTACGGGGATGCACACCAAAGACGACATACGGGCAATTCCTAAAGGATTATGCACAAATTGAgtaCAATATCGAGTATGAATACCACATGCCTCAGTATTTGTGTTTCTTATGCTGCCGTCAGTTAAAAAATACCTACGTTTTCATACGTCAAGCCCAAGATTGTAATCTTAAGCTTATAAATGTATTAACTCAACAAATTGATTGCCTGCGTGAACAGACAATAGCTTTACCTCAAATGCAGGAACAAACatcaatttctatcaaaaagaaaaatctaaacaaCATTGCTGTCCCAGAAGATCGAGATTCCCaagattttattacaacagATGAAAAGAATTCGGAAGCAAATATAACATTAATAGAACTAATTACCGAGGGAGTAAAACAGGCAAAAAATGATAGGGAAGAAAATTTGGAAGAGGATAATAACAActttaatattgaaataaatcaaaatactaCAGTATCAACTACTAATACAGAAGAATTCACCATATTGAATAAATCTGACATTCCACAAACGTTTGAGTCTCTACTGGATGAAGTGcagtataataaattaacaattaagcatgataatttaataaatcatatgCGTATTCATCATGACGTTACTAATATAGTACCATCTAAACATTTACAAAGACTAAACCTATcgtcaaaaaaacaaacatttgcgTGCAAAAAATGTCCTTGTAAGTACAGTAATAAATACAAGTATTTGAATCATGTTAAAGACAAACATGGTAGCAGAGAAGAAGCAAATGCTACGGATAAAAACGTAGAAAAGCCAAagaataaagttattaaatgcCAGTCATGTGATTATACGGCGAAAAGTTATGCAGCTTTAAACTATCACAATCGTTCTAAACATGGTACTGAGTCTGACAAATTAAAgtgtaaattttgttcatacACTAGTTTTAAGAAATGTAACCTATTGGTACATGTTAAAAATGTACACAAGGATCTTATAAAAACTCTTAAGGCTAATACGAAAAGCAAAACGGATGAACgCATTAcatcaaacaataatttaaataatgataattgtACATCAAGAGACTTTTTAACAACACCATTAgctgaagagaattttttagaTCATGTAGAATACTCTAGCGAAGATGACATTCCACTGGCACACACGATGATCCAATCAAGTTCAAAACCTTCATCAGAAGTTGAACAAGAAGAATTCAGTGATGAagatttcataagaaatattttaaatattaaaaaaagaccaCGTAAGATTTTGTCAACCAAATCTTTAGCCAGGCGTTGTGACGAATGCGGTAATATCTACAAAAACTACAAGTCATTATGTGCCCATCAACGCAGCGTACATATTAGCGAAGATAAGTTTAGTTTATGTCCACATTGTGGTAAAAAGTACAAACGAAAAAGTGATCTAAGAATTCATATCGAAAAGACACATGCTGCCACAAAAGATATAGAATCTGTTAAGAAACCCACAATAcctaaaacaagagaaaaacgtTTTATGTGTACAGAGTGTTCATATGTGTGTACGACaataactattttaaatattcacagAAATCGACATCATACTGGTGAAAAACCGCATAAGTGTGATATATGCTATAAATCATTTATAGTGCCATATGATTTAAAGGTTCATCGTTATTTACATACCGGCGAAAAACCTTACAAATGTCCAGTTTGTTGTAAAGGTTTTCGTGATAATTCCCACATGCTTAAGCACAAACGTATACACACTAACGAAAGACCATACAAATGTAATGATTGCGGAAAAAGTTTTACACAATCCTATAATTTGTCAGTACATAAGAGAACACAccttaaagagaaaaagttaaattgtttaatatgcggtaaattctttgaaaataaatcaatgctGAATATACATCgtataaatgaaaatcatcatGACGAGATACCTCCGTACAAGGAATATGTAATGCCACAACAAGTTTGCCTTAAATGTAGCTACCAATTAAAAaCCAGACGCTGTGATGTTTGTCATAAAGTATATCgtgatgaaaaatttcttaaaattcataaacgtTATACACATATGCCAGAAGAGGATAAAATTCCATGCCCTCTGTGCAATTACAAAGCTAATCGGACAGGGGCTTTAAGAGTACACATGGGTTTAGCGCATGGCCAAGACAAGGTTAATGAGTATTTTAAGCCTGTGCTGAAATCACGTAAAACACATGCCTGTAGTCATTGTTCCCGTTCATATACACGCAAAGACAGTTTACAAAGACATATAAGAAGAAAAcatctaaacaaaaattcaccCAAAGAAGACTCTCCAAAACAACTAAAAGCGCCTAAACCTAGGGAGAAAGAACGTTTTCTTTGTACATACTGCGGGCAATCATTTTCTTCGAAAGGCGGTCTAGAAAGTCATATTCTAACTCATACAGATGAAAGACCATTTTCCTGTGACATCTGTGAAAAGACGTTTAAACGTCTTAAAGACTTACAGCTGCATCGTGTCATACATAGTGATGAAAAGCCACATCAATGTTCAGAATGTGGAAAAGCATTTAAACgtgttgataaattaaaaattcacatgAGAGTTCATTCAGAGTTAAGACCTTACAAGTGTAGCGAATgcgaaaaaacttttaagtatCAGAGCGTTCTAAggacacacatgcacatacacacggGTCAAACACCATTCGCTTGCAAAACCTGTGGCGAAGCATTTTCGTTGAGGACATCCTTGAATaatcattgtttaaaaaatggtCATGTGAATGCTAGTCATGAACAGTGA
- Protein Sequence
- MEMENTNVGIFQEQQTKIDCNPIFKYKMTTIISPERDTTIDKCRCCTNPSVNFIKLETSIKTSEGLEKTYRDLLYEITNFQIPVYQEHVMPQQICHKCSQQLKSSYKFFQQACQVSRQYLQMAYEQPTSPVDVKNIEHLEESLIEINESVYDSKLEAKIEVEPLIIEEFNTEIKQEIEDNELLIEGNPPKEEYAEDSSSENPNPTFPLEDDEHDDSEEPESLNGNEDFLANEALARRCDICQKVYRNKKFLNNHIRYTHMPEEDKMPCPLCSYRANRSWSLRIHVGLAHGQDKVLEYFKPVPKSKKIHPCSYCSRSYAHKETLRQHIKTKHLNKSSIEEDVSETKTAKPKKSFLCTYCGQAFNWKHGLESHILTHTDERPFSCDICSKTFKRHKDLQLHRVIHSDEKPYQCTECGKAFKRVDKLKTHIKIVHSDLRPYKCSECEQSFKYQNVLRVHMNIHTGHSLTKPVGKHFRREHHEGLKKTYKDILNEITNFTIPTYQEFIMPQQICRKCCNQLKSSYKFIQEACRALQQHLQMAFDQRNSLDDVKNIEHLQESLIEIAGYSTKCDDEMKLEPFAIEECGTKIKQEIEDSEILMEENFLKQEALEEKNILENSNTDNTLEHDDSDEPESINKNDDFLSNEPLARRCDICHKVYRNEKFLKIHKRYTHMPEEDKISCPLCSYRANRSWALRVHMGLAHGQDKVEEYFKPVPNLNKTHPCSLCPRSYAHKDSLRLHMKSKHLNKTSIKEEFHIEKQTKPKERFLCTYCGQSFTWKRGLESHILTHSDERPFSCEICNKGFKRFNDLQLHRVIHSDEKPHKCSECGKAFKRVDKLKTHMRVHSELRPYKCSECEKTFKYQSVLTTHMHIHTGHTPFTCKTCGEAFSLRTSVKKILKEKELFLCTYCGQSFSTKAGLESHILTHTDDRPYSCDICDKTFKRLKILQLHRVIHSDEKPHECPECGKAYKRVDKLKIRMAVHSELRPYKMNEKRVQKCRTCLKDSTKTFPLTKSVRGCTPKTTYGQFLKDYAQIEYNIEYEYHMPQYLCFLCCRQLKNTYVFIRQAQDCNLKLINVLTQQIDCLREQTIALPQMQEQTSISIKKKNLNNIAVPEDRDSQDFITTDEKNSEANITLIELITEGVKQAKNDREENLEEDNNNFNIEINQNTTVSTTNTEEFTILNKSDIPQTFESLLDEVQYNKLTIKHDNLINHMRIHHDVTNIVPSKHLQRLNLSSKKQTFACKKCPCKYSNKYKYLNHVKDKHGSREEANATDKNVEKPKNKVIKCQSCDYTAKSYAALNYHNRSKHGTESDKLKCKFCSYTSFKKCNLLVHVKNVHKDLIKTLKANTKSKTDERITSNNNLNNDNCTSRDFLTTPLAEENFLDHVEYSSEDDIPLAHTMIQSSSKPSSEVEQEEFSDEDFIRNILNIKKRPRKILSTKSLARRCDECGNIYKNYKSLCAHQRSVHISEDKFSLCPHCGKKYKRKSDLRIHIEKTHAATKDIESVKKPTIPKTREKRFMCTECSYVCTTITILNIHRNRHHTGEKPHKCDICYKSFIVPYDLKVHRYLHTGEKPYKCPVCCKGFRDNSHMLKHKRIHTNERPYKCNDCGKSFTQSYNLSVHKRTHLKEKKLNCLICGKFFENKSMLNIHRINENHHDEIPPYKEYVMPQQVCLKCSYQLKTRRCDVCHKVYRDEKFLKIHKRYTHMPEEDKIPCPLCNYKANRTGALRVHMGLAHGQDKVNEYFKPVLKSRKTHACSHCSRSYTRKDSLQRHIRRKHLNKNSPKEDSPKQLKAPKPREKERFLCTYCGQSFSSKGGLESHILTHTDERPFSCDICEKTFKRLKDLQLHRVIHSDEKPHQCSECGKAFKRVDKLKIHMRVHSELRPYKCSECEKTFKYQSVLRTHMHIHTGQTPFACKTCGEAFSLRTSLNNHCLKNGHVNASHEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -