Basic Information

Gene Symbol
mier1
Assembly
GCA_005959815.1
Location
QOCX01002205.1:20980-23064[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-08 1.2e-05 25.1 0.5 4 46 452 495 449 495 0.94

Sequence Information

Coding Sequence
ATGGCTTCAGAtccattgaatttattattaaaggcaCCGCCTGTGTCTGTGTCAATTGGCCGAGAAAAGCGGAGTGTACCATCACCGTCTGCTTTGATTAATTTACAAGAATCCTTTGCTGATCCACAGTCACCATCGTCATCGTCTACTACGTCACAGTCCACTAGCGCTAACGATGCGACTTTTGAGCCAACAATTGAGATGATGGTCAATGATTTCGATGATGAACAAACGTTAAATGAGGAAGAGGCGTTAGCTGCTTTAGAATCCCAGGATCCAGATGAAGAAATAAACACGTTAAAAGAAGAAAGTGAAATGCCTTTGGAGGAATTATTGGCCAAATATAGAGCGATTCCTCCACCTACAACGTCTACATGCTATGAAGTGCCGAgtaggaaaaaatcaaaaaaatcatcacacaaaaagaaacataaaacgaaacaaaatcatGAACTTCCTTCTACGCCaactataaatgaaaatgtagaaGAGTTTTCCCATTCCAAAGACATCATTATTACGGGAAACGATGAAACAAATAGAGATGAAAAAGGTTTAGTTGCCGATGATGATAAACTGGAAGATTATGATGACGACTTGATTAGTAGTACATTATCTCCTCATCAAACGCCTACCCTTTCACATtcaaacaacgacaacgacaaagAAGCTGACAAAAGTACAGCAGAAAATGATACAGTACATGGTGAAATTCTAAAAGTTCGGAGATCTCATTTACTTGATTTATATCCGGAGGGAACATTTGATAACGTAGTTGTGGTAAATGATGCTATTGCTGGCAATGGCAAAGATATTCCTTTGGAAACACTATTTGGCGTTGAAGATGATGACGAAGATGAAGAAATTGAGGAAGAGGAGGATGAAgattataaaaagaaagttaTGATTGGAACGTCATATCAAGCAACCATACCGGTAGGTTTGTCTCAATATGGAGATATTTTACCATATGAAAATGAAGACAAACTAATTTGGGAGCCCAGTCAAGTGAGTGAACGTGAAGTGGAggaatatttaatacaaattcgagatataaaatcaaatcaacaagGCGAAGATGACGATGGCATTGCCGAACCTAATGAAGAAAACTTGTCAAAGGAAAACGGTAAAACCGAAAATCACAGTGAAgatttagaaaacaattctcTTTTAGCTAATGGAGACAAAGCGCATATTCAGAATGTCGTTGCATCTGATATAGATAGTCAAGCTGTAGTGAAAGACAATGAACAGGCGCTTCACTTGTTGGTGCAGTGTGGCTATGATTTTAAGGAAGCATTACGACGTAAGCGTTTGAATGCTTTACCACTTAATGATTGCATGAGTTTATGGTCTGAAGAAGAAtgtcaaaaatttgaagaaggTATACAAAAGTatggaaaagattttttgaaaatacgaCAAAATCAAGTGCGTACCCGCACTATGCGCGAACTTGTACAATTCTATTATTTGTGGAAGAAAAGTGAAAGAAGAGATCATAATTTCGCCAATGCCGATACAGTAGATCATATGGATATATATTTGAATGAAGATAATGAATACGGTTCTAATCCTGCTTCTGTACTGACGCCGTTAGGTTCTCCAGTTGGCACTACCTCAGCTAGCTCAGGCACTCGAAGAAATAGCAATACttcacagaaaaatatttctataatgaCTACCACAACCACCGCATCTGTTGGCACACATAATAATAGTTCCAATTCTACTGTCTCCAATTCAACTTTAGAAAAGAATTCTTCCACTATTTCTGGgcagcatcaacagcaacaacataaaagaCGTACTCACACCAACAGTCATACAACAAATGATTGTAATAGTGAAAGCCCTGCAACTATATTAACAAACTTATCCAAATGA
Protein Sequence
MASDPLNLLLKAPPVSVSIGREKRSVPSPSALINLQESFADPQSPSSSSTTSQSTSANDATFEPTIEMMVNDFDDEQTLNEEEALAALESQDPDEEINTLKEESEMPLEELLAKYRAIPPPTTSTCYEVPSRKKSKKSSHKKKHKTKQNHELPSTPTINENVEEFSHSKDIIITGNDETNRDEKGLVADDDKLEDYDDDLISSTLSPHQTPTLSHSNNDNDKEADKSTAENDTVHGEILKVRRSHLLDLYPEGTFDNVVVVNDAIAGNGKDIPLETLFGVEDDDEDEEIEEEEDEDYKKKVMIGTSYQATIPVGLSQYGDILPYENEDKLIWEPSQVSEREVEEYLIQIRDIKSNQQGEDDDGIAEPNEENLSKENGKTENHSEDLENNSLLANGDKAHIQNVVASDIDSQAVVKDNEQALHLLVQCGYDFKEALRRKRLNALPLNDCMSLWSEEECQKFEEGIQKYGKDFLKIRQNQVRTRTMRELVQFYYLWKKSERRDHNFANADTVDHMDIYLNEDNEYGSNPASVLTPLGSPVGTTSASSGTRRNSNTSQKNISIMTTTTTASVGTHNNSSNSTVSNSTLEKNSSTISGQHQQQQHKRRTHTNSHTTNDCNSESPATILTNLSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01313747;
80% Identity
-