Sbul000127.1
Basic Information
- Insect
- Sarcophaga bullata
- Gene Symbol
- -
- Assembly
- GCA_005959815.1
- Location
- QOCX01013864.1:2826-3957[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-18 4e-15 55.0 0.0 1 45 51 96 51 96 0.97 2 2 3.2e-20 6.8e-17 60.7 0.0 1 43 103 146 103 148 0.96
Sequence Information
- Coding Sequence
- ATGTACAATTCCGATACCGGCGATGATTCAATGATGATTGCCAATGGTTCACCCCATGATCAAAATGAACCCCATTATACGAATTTAGATCAACAACATGGCGATATGAAAGGCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATCACCAGAAGATCTGGAACGAGCCTTAGAGGCCATACGAGCTGGTCACACATCGGTACAGAAGGCAAGTGCTGAATTTGGTATACCAACAGgcaCTTTATATGGTCGCTGTAAACGTGAAGGTATTGAATTGTCACGTTCAAATCCTACACCCTGGTCGGAAGATGCTATGAATGAAGCTTTAAATTCTGTGCgCATTGGCCAAATGTCTATCAATCAGGCGGCTATACACTATAATCTACCCTATAGCTCTTTATATGGTCGTTTTAAGCGAGGCAAATATGATGTGACCAATACAAGTGGTACTTCCATTAACAATACATCGGAAATACCTCGtagtattgaaattattgaacatAGTCAAGAGAATTCGGtaagtaaatttcaaattccgATAAAAATTAATCACCAC
- Protein Sequence
- MYNSDTGDDSMMIANGSPHDQNEPHYTNLDQQHGDMKGSLMVPKLGHKMISPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRIGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTNTSGTSINNTSEIPRSIEIIEHSQENSVSKFQIPIKINHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -