Sric009844.1
Basic Information
- Insect
- Samia ricini
- Gene Symbol
- pnr
- Assembly
- None
- Location
- BLXV01000001:15538568-15559901[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 3e-14 52.5 4.1 1 35 216 249 216 250 0.97 2 2 5.2e-18 1.3e-14 53.6 6.0 1 34 270 302 270 304 0.98
Sequence Information
- Coding Sequence
- atggtaatattcgtacagtattctattaaggtgtccctcgccttgcaaatggatcctagtctaataaaacttattaatgtcggcagtcagtctgtccgaccgctaaacacaatgttgcgcaaccgctcagtatcggcgagtggttgcaggcagctgatacccggcgctcccgccgccaccgtcactgccgtcgccactctacagtacctaccgctatccgggattctatcccatcactacaacactgacattaacgaatctacacagaactccaatagagtcgacagtacgcagtgcagagcgatgtttgggggtagcggtggcggcggcgttgggggcgggggcgggggctacgggtccggcgcaggcgacggctccgagggctacggtctaggatacgtgcccggcggcgctcgcctgcagcagtacgccgcgcacttcgcaccacatcagaacgtctggcatcaccatcacgcaccgcaccacgacggatacgggggcagcagtgtcgccggggtgggctcgatggctggtggactctacgggcagaacatggtgatgggctcgtggtgcgccccctacgatgctctccagcgtcctccagcttacgatggagtcgtagaggtgtacgaggagggtcgggagtgcgtgaactgcggcgccaacaacactccactgtggcggcgggactcgaccgggcactacctgtgcaacgcgtgcggtctctaccacaagatcaacggcgtgaaccggccgctcgtgaagccgagcaaacggctgtcggctgcacgacgtcacgggcagtgctgcaccaactgcggctcgcggaacacgacgctctggcggcggaacaacgacggagaacccgtttgcaacgcctgcggactatattacaaattacacggaattaataggcctttagcaatgaggaaagacggaattcagacaagaaagcgcaaacccaagaaggccgcgaacggcgctaaacccaacatggacgcctcgaaaaaggaagggcacagctctccgggtatcgacgacagtaaatcgagcatgtctgacgtgggtttgccactgtcgcagtcgggcgcggtcttgtcgcagaagagtgcacttgcgactccggactcgtcgccgcagggacagcacgcgctcgcgcacgcacactcccatgctcactcacacgcacacgcacgcagtgatccgcagcagtacccgctaggtttagcggcgagcgctccgttcctctcgaacccctccctgttcaacataaagagtgagccgagcggcaccaacggatacgagagctacgtgcccccgccacccccgcacgcccccaccgcagccgccggacactaccacgcgcaccaacactatctgcacacgctgcagtatgggttaggcaacgtggaagaagaggaaggaagcgggttcctacatcagcgcaacgtgacggcacacgccaagctcatggcgtccacgtag
- Protein Sequence
- MVIFVQYSIKVSLALQMDPSLIKLINVGSQSVRPLNTMLRNRSVSASGCRQLIPGAPAATVTAVATLQYLPLSGILSHHYNTDINESTQNSNRVDSTQCRAMFGGSGGGGVGGGGGGYGSGAGDGSEGYGLGYVPGGARLQQYAAHFAPHQNVWHHHHAPHHDGYGGSSVAGVGSMAGGLYGQNMVMGSWCAPYDALQRPPAYDGVVEVYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKAANGAKPNMDASKKEGHSSPGIDDSKSSMSDVGLPLSQSGAVLSQKSALATPDSSPQGQHALAHAHSHAHSHAHARSDPQQYPLGLAASAPFLSNPSLFNIKSEPSGTNGYESYVPPPPPHAPTAAAGHYHAHQHYLHTLQYGLGNVEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -