Sric002744.1
Basic Information
- Insect
- Samia ricini
- Gene Symbol
- Mblk-1
- Assembly
- None
- Location
- BLXV01000002:11200948-11244200[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-14 1.6e-11 43.9 0.0 1 42 300 342 300 344 0.94 2 2 1.4e-18 1.1e-15 57.3 0.0 1 43 510 553 510 555 0.95
Sequence Information
- Coding Sequence
- atggagggtattcattttccgtcaataatctggagaaattgtatacatcttgaccccgatccaggtctagaacgggtggcggaggagttgatgggtcgaagaaaatggaaactatatcaggacgcgttaattccaaagcaaaccgaacaggaatcgagcggagacgagtcaatgccgtccacggaaccaccgccggcgttaaagataaaaaccatcgaggaaataaacgcgccagaagacgaaagaccagaacgggtcgaagaagaaacgaagacggaacgccgccagacgattctagagagtctgatcaacaggccagcgacccaacccaagttagaagtacaagaggaaccgacggattggaaaccgccggacaagtgttacttctgcgttgatggtgaaagaggagaggggcagaccacgacggacgtcacgcaagcgggagcggcgagtccagcgtcagagtcagacagcagttcggtgtcgggcgcgaagagtccagccgcgacaccagcactgctccagcacctgctgcagcttcaagtacagaacccgcaaactatagcacagcaggcgtacacggagatgtgtgtacagttccagcagatgttggcggcgctggctgcgctgggcacggggctggtcccgccgccgctcaccccggcctggatgatgcagcggatggcgcaacagaggcaccacactgacaggctagagggggtcgagaaaggaccagcaccatcgtctccaagtcccgtggaacagcccctcgatcttagcgcgaagtcaacatcaagcaccagtggaacaccaccgccagactcaaaactcctcgacagcaggttgaaacgtgctgtattggagaatgcaagtaatagcggaacacgtcgtgcctacactgatgacgagcttcagtgcgctctccgagacatccagtccgggaggctgggcacgcgtcgtgcagccgtcgtctatggtattccgcgctccactctccgcaacaaagtcaacaagctcggcctcaccacggaccatcaagactctgaaatagacagcgatcccgaacgaacagactctccgccctcagttatattaaagataccaacgttccctcccccggacgacaagagctcgtctcccgccacatccggcaccattcctataaccccaataacatcctcgattccatcccatcagcctacattgaatgcttcgtctaacttacttttgccacactccgtattcgctgacccgcccgctccgcaacatattttcacttctttaaatgacgtaatagcaaaaagcattagccagaaatatcagcagcctctggacaggtcacaccagccggatttatcattcatgagggcgccggacgcccggcatgtctctgtaataaaatctcaaaccgagaatcagagaaactacgcgatgccgagtaattccaaagcgacaccgaacaacaacggacagtctgcagctggcggtaagggaaccaggcctaagcgagggaagtacaggaattacgaccgggacagtctcgtagaagcggtgaaggcggttcagagaggtgaaatgtcggttcacagagcgggctcgtactacggagtgccgcattcgacgctcgagtacaaggtcaaggagagacatctcatgcgaccgaggaagcgagaaccaaagccaccgcaggatacgaaaccgcagccaccgaagcctcccccaccgaaaccgcctgggaaaccgttctcgaatgggcttaatgggcctgataatccgggatatccagcgggatatccattttgggcgggcgccgggtttgcgccgccgccggcaccggacttgtatgcatcacatatgatgcggagacttcgcgaggaggcgccgccgcccgcgaatggttcttttcttgaaggtattatccggtcaagtttagagagaccgggagcggcactgctgcagcggttgacagcggagccgcgtacaccactgccgaccgaagcaccgagcctgctccggcggttggcaggtgaaccggacgaaggtccaccgttgcgacgcgcacgactcgacagttctgaccaccaactagcagcggagatgcgcgaggcagtgcagcggctgcgtgcagacaaactaaggccgcggaacggaacgccgacgccgccc
- Protein Sequence
- MEGIHFPSIIWRNCIHLDPDPGLERVAEELMGRRKWKLYQDALIPKQTEQESSGDESMPSTEPPPALKIKTIEEINAPEDERPERVEEETKTERRQTILESLINRPATQPKLEVQEEPTDWKPPDKCYFCVDGERGEGQTTTDVTQAGAASPASESDSSSVSGAKSPAATPALLQHLLQLQVQNPQTIAQQAYTEMCVQFQQMLAALAALGTGLVPPPLTPAWMMQRMAQQRHHTDRLEGVEKGPAPSSPSPVEQPLDLSAKSTSSTSGTPPPDSKLLDSRLKRAVLENASNSGTRRAYTDDELQCALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKLGLTTDHQDSEIDSDPERTDSPPSVILKIPTFPPPDDKSSSPATSGTIPITPITSSIPSHQPTLNASSNLLLPHSVFADPPAPQHIFTSLNDVIAKSISQKYQQPLDRSHQPDLSFMRAPDARHVSVIKSQTENQRNYAMPSNSKATPNNNGQSAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPPPPKPPGKPFSNGLNGPDNPGYPAGYPFWAGAGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRTPLPTEAPSLLRRLAGEPDEGPPLRRARLDSSDHQLAAEMREAVQRLRADKLRPRNGTPTPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819978; iTF_01429856; iTF_00114032; iTF_00187063;
- 90% Identity
- iTF_00114032;
- 80% Identity
- -