Sric005124.1
Basic Information
- Insect
- Samia ricini
- Gene Symbol
- kn
- Assembly
- None
- Location
- BLXV01000006:24443406-24529531[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-241 4.8e-237 788.1 0.0 11 387 23 397 14 400 0.98 2 2 6.9e-09 0.00014 20.5 9.0 420 561 406 558 398 573 0.63
Sequence Information
- Coding Sequence
- atgtttggcctccatcatcaggaggcggctggagggttacacacgcagccccgagggccggttacatctctcaaagaggaacctttaacccgggcttggatgacacccagttctctagttgacaatactaatagcgtgggagtgggtcgggcgcacttcgagaagcaaccccccagtaacctgcgcaagagcaacttctttcattttgtcgtcgcgctgtacgatcgtgccggacagcctgtcgaaattgagcgtacagcttttattggtttcattgagaaagatcaggaagctgagggtcaaaaaacgaataatggtattcaataccgtctacaacttctgtatgccaatggtattagacaggagcaagacatattcgtacgactcattgattcggtgacgaaacaaccgatcgtctacgaaggtcaagacaagaatccggaaatgtgcagggttttactcacacacgaagttatgtgcagccggtgttgtgataagaagagctgtggaaatagaaacgaaactccttcagatccggttataatcgatcgattttttctcaagttctttctcaaatgcaaccaaaactgtttgaaaaatgctggcaaccctcgagatatgagaaggtttcaagttgtgatatcgacccaggtgatggtggatggtcctctactagcgatatcggataatatgtttgttcataataacagcaagcacggacgacgagcgaaacggctagacccaactgaagccggtctatatccaccgttgcccgtagcaacgccgtgcatcaaggcgatatcaccgagcgagggttggacgtcgggcggctcgactgtgatcattgtcggagacaatttcttcgacggtctccaagtagtcttcggaactatgttggtttggagcgagttaataacatctcacgcgataagagttcaaacgccaccgagacacataccaggcgtggtggaagtaacgctctcatacaaaagcaagcagttctgcaaaggtgcaccggggagattcgtttatgtttcgctgaacgaaccgacaatagattacggatttcagaggctgcagaaacttataccgagacatcccggtgatcccgaaaaactaccaaaggaaataatcctgaaaagagcagcggatctagcagaagccttatactcaatgcctagaaacaatcagctcggtttaggcgcaccccggtcgcctcccgccagtatgcctttcaattcttacactggtcagttggccgtcagtgttcaggacactgcggcatcgcagtggactgaagaagaatacgcgcgaagcggcggttccgtatcgccgcggtattgctccgcgtcgtcgaccccccacgccgcccccgcgtcctacccgcacccgcagcactaccccgcgccacccacctcactcttcaacactacctcactgtcactaggaccatatcatccgaccaacatgaatgggttatcatctgaccatcactataacacgtataacacgaaagatagcggacattacagcgaaagaaatggaaattctaaaagcctggctgactgtccggcaaacattcattctaaatgcaccgggaatgatatgaaagggctacagaataaagaggctaagtcgagaagcgcctttgcggtcgtaaggcagagtccgccgcgcgttaccaatgctcaccaacagaattggcaacatctagctgttcagtga
- Protein Sequence
- MFGLHHQEAAGGLHTQPRGPVTSLKEEPLTRAWMTPSSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSASSTPHAAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPTNMNGLSSDHHYNTYNTKDSGHYSERNGNSKSLADCPANIHSKCTGNDMKGLQNKEAKSRSAFAVVRQSPPRVTNAHQQNWQHLAVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959956;
- 90% Identity
- iTF_00843290;
- 80% Identity
- -