Sric017315.1
Basic Information
- Insect
- Samia ricini
- Gene Symbol
- Arid5b
- Assembly
- None
- Location
- BLXV01000022:3446280-3528725[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-10 4.9e-07 30.2 0.0 3 89 311 383 309 383 0.90
Sequence Information
- Coding Sequence
- atggacaaacctttttttcggttggtgggctctccctgtggtcagcacggtcagtacactttctacaaggcactccgagtcaccgggaaaagggagaaaatcatagctataggcgacttctttttcataagaatatggcaggattcggagctcgtttccattggtgaactccaactattgtggacggatcgcgtatcagaccagaccctggtcagtctacggttgtacttcttgcctgagaacacaccggacggtcgaaatcagcatggagaggacgaagtgctggctataaacgacaaggtggtagtaaaggctgaggatctgatgagttggatgtgcgagggcgaggactggcggtggggtttgcgcgccgtctggcgtggttcatgcacacccccgactgaagcaaagccgactgagcctttacaccacacaaaattagactttagcgacgtcgagaaggagaagaattctatagaatcggatgcagatagccccggcgttgtggttttctcgtatcctcgatactgcaggtatcgagccctggttgcaaggttggaggggatccagacggactggctgcgtgactcgctcgttgccgccctaggcggttactctgcgcccagtaacaacaccaggatattgtattgtaaggacacgttcgaatatccagagctagaaggtcacgagttcgtttgcaatcacctcgcgccgagattaaaagggaggcctcgcggccggcggcgtcgcatccctcgatctcgatccagatcacgctcgtccagatctacggattcggatagaggcttccagcaccagagcgatcccgatacccctcggaggctatcgctgcgtaacggggcgtcaggaaagcacagcgaagaagaagaagaagcggtggagaagaaacccgacgagacagctgaagataaagcattcctcgtcaccctcaagcagttctacaaaggcaaaggggagtccttcaaaggacacgcgttaaaagactgttcattgcgttggttatattggtcggtggtgtcgcggggcggttacggggccgtttgccgccggagactttggtcgacggtgtgcgcgcactcaccaactgccgccaggaacctttacgaaagatttttgctaccatacgagaatcacgagaggaggaagggctccatattgaaattcaacgggaaattcgaagagccccaaacgattgtagacaccatagaagtgagcgactctcctctgagggaggtggagagtagagtcgaactgccggagaagagactacgaactccgtcgccgaagatcgaaccgaagatcgacaacgagacgggggagtgtaaagaggagaatgtcgtcacgaaaactgccgaagtgttgaatagagaattcttggaatcgttacctaaggaggaagagaaacccgtcaagatatcagtgaaatctgtagagaaacttctagaagttaaagagccgatggaaaataataaggagtcggtcataaataatgtcataattgacgtcgagaagccgacgttagttaataaagaccatacaaactattacaacgattcggcttataaatttaatctagggttgagggattcgctgcggggtcaacgtgatatatatagtgtaatcccagcgcacgcgctgactacagcggcggccgtggcggccgcggccggggggtccgcccctaatgggtactctgccccccgacccccgtcgcgaccccccgtaccgcaaccagcgccggccgaaccgacctccattggcgctcaccgagttgtgcctacgtcaagcccacaagtaggggcggcggttcgccccctggggcggagctccctgcgcgcagtccgagtgaagccggcgcgtccccaccactccatacatcacaatacgtcccctgcgccacccttacggccggattctgcgtcgagttcgccgccgaccgcgacccccctggggctcgcggtgacccccctgggtcccggggtgcagacccccgtgctgctgtctgtcccacaaccgattagtaccggaatcacgaacttcggtatccatcgaccgccgcagcccgttcataataaccatcacagcgatgacgaaattgtcgaggtgccgtacaaaccgaaatcgccggagatcatcgacctcgacgagtacgaggagggctgcgggaggaacgaacactcctcggccaagaagaagaaactcgatttactgaaagagcgggggctcgaggtgaccgccatcccttgtaccggttggccgaccccgcacggaaacgtcggacccctccagcggcaactgttcacacgagcgcacctcctacagctgtacgggtacggacccccggcgacgcccccgccgccgccgcgcgccgcgcaagccgcctgcccgttcggatcagcgggggtcacgaaaactgtttactgcgacccccgagcccccctgatgccggcgccgcacgtcatactaggcgctccgccccgaccggtaccggtgccgatgcctccgccctcgccggccgcgtcccccgcgggagcgttagacttgacccggccttcgcccccgccggcacccccgaaggtcgagatcacgttagtgaataagtggaaagcggggaacggcagctcgctcgtggagccctacgctacgttgtacggtagaatggccgcgtacaggcaactgaccgggcagagggacaagcgatag
- Protein Sequence
- MDKPFFRLVGSPCGQHGQYTFYKALRVTGKREKIIAIGDFFFIRIWQDSELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPDGRNQHGEDEVLAINDKVVVKAEDLMSWMCEGEDWRWGLRAVWRGSCTPPTEAKPTEPLHHTKLDFSDVEKEKNSIESDADSPGVVVFSYPRYCRYRALVARLEGIQTDWLRDSLVAALGGYSAPSNNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRIPRSRSRSRSSRSTDSDRGFQHQSDPDTPRRLSLRNGASGKHSEEEEEAVEKKPDETAEDKAFLVTLKQFYKGKGESFKGHALKDCSLRWLYWSVVSRGGYGAVCRRRLWSTVCAHSPTAARNLYERFLLPYENHERRKGSILKFNGKFEEPQTIVDTIEVSDSPLREVESRVELPEKRLRTPSPKIEPKIDNETGECKEENVVTKTAEVLNREFLESLPKEEEKPVKISVKSVEKLLEVKEPMENNKESVINNVIIDVEKPTLVNKDHTNYYNDSAYKFNLGLRDSLRGQRDIYSVIPAHALTTAAAVAAAAGGSAPNGYSAPRPPSRPPVPQPAPAEPTSIGAHRVVPTSSPQVGAAVRPLGRSSLRAVRVKPARPHHSIHHNTSPAPPLRPDSASSSPPTATPLGLAVTPLGPGVQTPVLLSVPQPISTGITNFGIHRPPQPVHNNHHSDDEIVEVPYKPKSPEIIDLDEYEEGCGRNEHSSAKKKKLDLLKERGLEVTAIPCTGWPTPHGNVGPLQRQLFTRAHLLQLYGYGPPATPPPPPRAAQAACPFGSAGVTKTVYCDPRAPLMPAPHVILGAPPRPVPVPMPPPSPAASPAGALDLTRPSPPPAPPKVEITLVNKWKAGNGSSLVEPYATLYGRMAAYRQLTGQRDKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00113919;
- 90% Identity
- -
- 80% Identity
- -