Sric007410.1
Basic Information
- Insect
- Samia ricini
- Gene Symbol
- Jarid2
- Assembly
- None
- Location
- BLXV01000020:4692384-4716862[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 5.6e+03 -2.0 0.0 46 81 631 660 624 661 0.66 2 2 6.2e-16 1.6e-12 47.8 0.0 11 89 907 982 898 982 0.88
Sequence Information
- Coding Sequence
- atgaaaactgaagtcttgtttgttgaaaatatgaaggcaaaaggaaaaaggagtgtacaggcccagaggaaatttgcacagggtgcctacatacctccttccaatcagacaatggaacgaagacgagatacgggacaaagggattacaatattccaaaaatagtgcgcaaaactcgaataaacatgtcagctgcaagccttctggatcacatcacattcaaaaatttatacccacatttacaacccattgttctactagaaaggctgaaatgcactagtgtagaagtggcaacaccaaacaaatcacagccaggttcatcaaatcaaataaatattttagatgaggaacataacaataatgtacctgctaaaatgcaacaacgcgaacatagaagtaaatcacggtgcagtattatgacacgatctcgttcttgtaatcgttatacgggggatgccaaagaaaaattgaaaaagaaacgggtcactttccgcgatgattttagtattgatgataatagaccgctcacgttcttcacaagtaacgtggccgcgaggactcgtcgcagccgcgtggattatgatagagatcgggacgaagtagaaccaacacaggccccaactaatcacaaacagcaagagagcctattggacaaacaaggagaacacagcgcgcgacgaggtcgaccagcacacgtaaagaactcacccgccaccatcacaacagatcttgaccaagatccaggacaatccaatgcaactttgcaaccagaagacattagtctagtcacgaataactcatgtcccagtcttaaatattctcacgctaaagatgtattgtccgccgcagcaaaggaagaattaaagcataggtgtaatttatgcatgtcatgcaagagtgtcgataaattgttgcaaatagctagtctggtagaaaatcctttgagcataagtccgggtgaatcaattgatgtttatcagatagatgccaatgagcatgctgataatacatcagatcaacctaaatacaacgcaagttctccagctacatgttcttcaacgagcaatgctaattcagtgcctatttatttggatataatgtccgaagagtgtactcacgtaattcaaattatgtgggacgaaaataacgatagaatattaagggcccggcttgttccaaaggctcaagtgaatattaataacgaactatcattaaatactcacgggaacttaatggaccaatttataaatacactaaatgagagcagcacattgcgaatgtttaagcttctaagcgatactatggaaggatatgaaaatatgctacataatgacgtccagtggtggaagaaaaaatttaaaacaggtatcaacagcagtacggcatccacatctgcacagccgtttgaggtacctgaagaagtgcaaaatgagcgtgtggaatcaccaccagatgataggcttggaaccaataatgttgaaaatataaacgtcgatttcaatgacatggaaactgttgaaatgaatgaaagcacattcgatgtagaccaattggaaccagtgccgccagattcggaaacaattccaacccaaggagaggctggacaatcacaggctgtgttacgagagccacaacctggagaattcacaacaataaacactgataactatttgagtgaggaaaatatcagttcaataattaaacgtgctattatccaaaataatataatgagacaaaaacagatcgaatcccaaaaatatcattgccgccccgaacgaaatatattgcctccggctgtaagcactacaagcgtaacacctagcaagcgtaagataactaaaaagaccaaaactttgcctaaatctggtgccacacttctaaagaaaaaagggcttaagaaggccaatgcatggaaaaatgtatccacaccaattagagccactaagcgtcagtcggcacgactcatggctaaaactatatatggagcgcccacgcccggacgttccacaacgcgtatcgaatgtgtgcggacccaaagaaacactttacctactccacgaaacctatctctaacctctaaaaatgtaaatacacctatacctatacctataccaattttacatgaaacatccctatcccaaccttctacttcgagtgccacacaattaagccagcctctcatcagtaaacgttctactagtcttgttcagctgccagaacaaacaacgggacgaaaacggagagcatcaataaatatagcgaggaagaaagttaaaatgctgcgcaattcaatgccgggcactttaacaactgaaaatgttgaaattgattcaacatcgagcgacagtggtaccccgttacactgggcgacatcatcgaaaactttattcgtgaataaagcgaacaaacctgcggctggttctaacaacagagaagggctcggcacgaggaacagtttcccgagaggctgtgaaaaagccgagctcgtgaacgctttagttttctatcccactaaagctgaattcgttgatcctatagcatattttgaaaaaataatgccaatggcaaaaaaatttggtctgtgtaaagtcgtacccccaaataattttagcccaacgtgccacattaaggacgagatgcgtttttctgtatctaaccaatatatagctcgcatgtacagccgttggggtgtggctcaacgggaaatgtgcgcgatcaaagtgaattccgccacccaaggggttgtcttcaacaaggcgccattgttggactgcatggaggtaaaccttccaaaactataccatttggtacaacatattggtggattgaagaaagtcattgaaaagaaaaaatggacacgcatcgctgaagatctacgcgttaaccaatgcttgaacccagagagaaaactcgactgtatctatgttaaataccttctctcctacgatacactaacgaatgaagaacgtcaaaaaatgttacgtaaagttgaaagctgttggcataaatacaacatgaaaatgttagaacgtgcaatgaatccactgcacggtaagaagaaattactaggcgagtcggattcgtctggagatgaagaggaggaggagatggaccgttttgtggtttccgctttggccgaagccgaagactgtgtagtagaaggaaggcaaatgaacctcagcatgtttaagaagatcgctaagggcatgatgtacgtccatttcccaaatataccgcagcccattgtggacgacgtcgagaatgaatactggcgcatagtacttctcgcggcagaacacgtttgcgttaacgtggcctccgtggacaccggcccgcaaggttacgggttcacgaagaacaagaacgactcttacggcagacacccctggaatcttaaggtgctgtgccaaaacccgggcaatattctccgttctctgagttcagttctcggggtgacagcgccgactttgcacctcggtatgtgtttctcatgcagctgctggcatagagacccgcatggtctgccctggatggagtacatgcactcgggccctggcaagatatggtatggtatccccgatgagcagagtgataatttccgtaaagccgtcgaggcgttatgccctacgtcgtatcggaacaagtcaatatggctaccgtctgacataacaatgataccgccgaacttgctacgcgagcacaacgtgtcgctctccagagtggtccagaagccgggggaattcataatcgttttccctaaagcgtactcctgctctattagtaccgggtacaccgagtcggagagtgcgtatttcgcaaccagttcgtggctcgcgagcgtacaccaaatcttccaggagttacgtgagagctgcgagccgacagcgttctctgtggaacagctcctggtgagcgtagcccgggacccgcgcgtctccctgagcgtgctgcagcaggtccacgggaacctgaccactgttatatgcgatgagctctcctaccggcagatactacttaagaagggcatcaaggttatttacggcgagataagcatgcgtacgagacaacgtcgcggctggaattcccgtaatgatgaatgcgatatttgccgttctgtcttatatttatcaaaggtaatagggataacaacgaagaagtcccaagtttgtctgcaacacgcggtggacttgataagggtgaggggtaatcgagtgaacatcgctcaggtagaaatgattgtgccgttttcagacgaggagctcaaaaatatcgtcaccaacgtagtggaacggttgacacatttgtaa
- Protein Sequence
- MKTEVLFVENMKAKGKRSVQAQRKFAQGAYIPPSNQTMERRRDTGQRDYNIPKIVRKTRINMSAASLLDHITFKNLYPHLQPIVLLERLKCTSVEVATPNKSQPGSSNQINILDEEHNNNVPAKMQQREHRSKSRCSIMTRSRSCNRYTGDAKEKLKKKRVTFRDDFSIDDNRPLTFFTSNVAARTRRSRVDYDRDRDEVEPTQAPTNHKQQESLLDKQGEHSARRGRPAHVKNSPATITTDLDQDPGQSNATLQPEDISLVTNNSCPSLKYSHAKDVLSAAAKEELKHRCNLCMSCKSVDKLLQIASLVENPLSISPGESIDVYQIDANEHADNTSDQPKYNASSPATCSSTSNANSVPIYLDIMSEECTHVIQIMWDENNDRILRARLVPKAQVNINNELSLNTHGNLMDQFINTLNESSTLRMFKLLSDTMEGYENMLHNDVQWWKKKFKTGINSSTASTSAQPFEVPEEVQNERVESPPDDRLGTNNVENINVDFNDMETVEMNESTFDVDQLEPVPPDSETIPTQGEAGQSQAVLREPQPGEFTTINTDNYLSEENISSIIKRAIIQNNIMRQKQIESQKYHCRPERNILPPAVSTTSVTPSKRKITKKTKTLPKSGATLLKKKGLKKANAWKNVSTPIRATKRQSARLMAKTIYGAPTPGRSTTRIECVRTQRNTLPTPRNLSLTSKNVNTPIPIPIPILHETSLSQPSTSSATQLSQPLISKRSTSLVQLPEQTTGRKRRASINIARKKVKMLRNSMPGTLTTENVEIDSTSSDSGTPLHWATSSKTLFVNKANKPAAGSNNREGLGTRNSFPRGCEKAELVNALVFYPTKAEFVDPIAYFEKIMPMAKKFGLCKVVPPNNFSPTCHIKDEMRFSVSNQYIARMYSRWGVAQREMCAIKVNSATQGVVFNKAPLLDCMEVNLPKLYHLVQHIGGLKKVIEKKKWTRIAEDLRVNQCLNPERKLDCIYVKYLLSYDTLTNEERQKMLRKVESCWHKYNMKMLERAMNPLHGKKKLLGESDSSGDEEEEEMDRFVVSALAEAEDCVVEGRQMNLSMFKKIAKGMMYVHFPNIPQPIVDDVENEYWRIVLLAAEHVCVNVASVDTGPQGYGFTKNKNDSYGRHPWNLKVLCQNPGNILRSLSSVLGVTAPTLHLGMCFSCSCWHRDPHGLPWMEYMHSGPGKIWYGIPDEQSDNFRKAVEALCPTSYRNKSIWLPSDITMIPPNLLREHNVSLSRVVQKPGEFIIVFPKAYSCSISTGYTESESAYFATSSWLASVHQIFQELRESCEPTAFSVEQLLVSVARDPRVSLSVLQQVHGNLTTVICDELSYRQILLKKGIKVIYGEISMRTRQRRGWNSRNDECDICRSVLYLSKVIGITTKKSQVCLQHAVDLIRVRGNRVNIAQVEMIVPFSDEELKNIVTNVVERLTHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -