Spla004436.2
Basic Information
- Insect
- Salpingus planirostris
- Gene Symbol
- stc
- Assembly
- GCA_949788335.1
- Location
- OX460919.1:4399417-4402568[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.8 1.7e+04 -4.0 3.0 6 10 307 311 303 311 0.61 2 14 0.73 4.3e+03 -2.2 0.3 4 10 337 343 337 343 0.87 3 14 1.7e-05 0.1 12.6 12.1 4 18 352 366 350 367 0.93 4 14 1e-07 0.00058 19.8 15.0 1 18 403 420 403 421 0.97 5 14 1.6e-09 9.2e-06 25.5 13.6 1 18 461 478 461 479 0.98 6 14 4.1e-07 0.0024 17.8 15.2 4 19 526 541 519 541 0.87 7 14 1.9 1.1e+04 -3.5 2.0 5 10 570 575 570 575 0.93 8 14 0.0067 39 4.4 9.0 1 11 581 591 581 592 0.96 9 14 2.1 1.2e+04 -3.6 0.8 4 10 596 602 595 602 0.69 10 14 1.1e-08 6.6e-05 22.8 10.5 1 19 608 626 608 626 0.97 11 14 2.3 1.4e+04 -3.8 0.3 6 10 655 659 655 662 0.74 12 14 0.0009 5.2 7.2 12.8 1 19 665 682 665 682 0.93 13 14 1e-07 0.0006 19.7 11.8 1 19 718 737 718 737 0.96 14 14 4.5e-06 0.026 14.5 11.6 1 18 747 765 747 766 0.91
Sequence Information
- Coding Sequence
- atgtcttcttcttcttgcgCGGTTCAGCATATGTCGTATTGGGACCCATACCAGAATCAGCTGCATGGCCAATTCCCCACGTACAGTGAAGACCATGTGCAGCATTTCAACGGTAACATGTCCTATTACGACGACCAAAATCCTCCGCAGTACGGTCTAGCTCAACAATTCACCAATAACTACAGAAATGAGCCAGGACCGAGTCAGGTGACGTCCGCCTATGAATACGAGGCTCCCCCTCATGAAGGCGGACGACCGCAACAGCAACGCGACGGAGGCGCCGTGAGGAAACCCCAGAACGAGCGAAGAAACTGGGGTAATAATGGAAAGAAAAACGAGAGATATGGAAGTGGCAGGACTTTCCACAGTCGTGACCAAAACAGTAAAAGGACACCAGATGAAGCCGCCAACTATCCGGATAATGTTCCACCTCTAGAAACAAGCAGAAACTACGAAGATGGCGGTAAAAATCAAGGGAACAGAAACAGTTATTATCAGAATAACGGAAGAAATCGCAACTATTACCAATACGAAGATAGGAGATTCAACTAccgaagtcgtgatggcaatCGCCAAAATTATTATGGCAAGAACTACAACAAATCCAACGGGAGGAACTACGAGGACTATAATAACGCACCGAGAGAAAAAAACACTTGGAGGAAATCAGAGTCGACAAATTCCAACCGAAAGTGCCCAGGCAACATCACTCAAAAGAATCtGGATGCTGCCTCGCAAAGGGAGCGTTTGGAACAGATGCTCTCCAGGCGGACACTCGAATGCCTAGTCTGTTGCGAAAAGGTTCGTCACACCGATAAGGTCTGGTCGTGCGGCCAGTGCTACCTGATCCTGCATCTGAACTGCACGATCGCCTGGGCCGACTCGTCCAAAGTGGAGAAGGGGTGGAGATGCCCGGCCTGTCAAAACGTCTGCCTGGAAATCCCCAAACAATATTTCTGCTATTGCGGCAAGAGCCTGGAGCCCCGTCCGGTGCCGGGAGTCATCCCGCACGCCTGTGGCGACCCCTGCATGCGCAAGGGCCGCCTGTGCGATCACAAATGCTTGATTCTATGCCACCCGGGCCCTTGCCCCGATTGCAACATAATGGTCTCGAAGTCTTGCGGCTGCGGGGCCACCCAGCAGACCGTCAAATGCAGCTCGGATACGGATATCGTCTGCACCTCGATCTGCAACAAACTTCTCGAGTGCGGCTTGCACTCTTGCGAGTCGCAATGCCACACTGGACCTTGCAATCCTTgcgagaaaattttaaagcaGATTTGCTTCTGCGGTAAAGTCGGTCGAAAAGTTCCCTGCACTTTGGAACACGAAGGCGCGATTTCTTACGCCTGTGGTGACGTCTGTGGCAAAACTCTGAGTTGCGGCAATCACAAATGCGACCAGTTATGCCACGAAGGTCCGTGCGGCGATTGCGTTCGAGATGTCGATAAAGTAGAGACCTGTCCTTGCGGCAGGTCCAAACTGGCGACGGAACGCACGACCTGTCTCGACCCGATTCCTTGTTGTGATAAAATCTGCGCGAAGATTTTGGATTGCGGGCAACCGGCCGCTCCGCACTCCTGTAAAGAGAAATGTCACGAAGGCGAATGCCCGCCGTGCCCGCTCACGACCTTGGTTAGGTGCCGATGCGGTCACATGGATAAAGAAGTGAACTGTAGTCAATTGACGACGAAAGCCGACGATGCCCGCTGCGAAAAGAAGTGCACGAAGAAGCGGTTGTGTGGTAAGCACCGTTGCAACCAACGTTGCTGTATCGAGATCGAGCACTTTTGCCCGCTTCCGTGCAACCACGTGCTGACTTGCGGGCAGCACCGCTGCTACAGGACCTGTCACAGCGGGCGGTGCTTCCCCTGTACCGAGACCAGTTTCGAGGAGCTCTACTGCGAATGCGGCGCCAACGTTCTGTATCCGCCGATCCCTTGCGGGACTCGCCCGCCCGTCTGCAATAATCCCTGTTCGAGGGGGCGCCCTTGCGGTCACGAGGCGAACCATTCGTGCCACACTGGGGCCTGTCCTCCTTGTACGGTCCTGTGTAAGCGTTGGTGCTACGGGAAGCACGAGCAAAGATCCGCGATTCCCTGTTGCCAGGAGGATTTCAGTTGCGGATTGGCGTGCGGTAAACCGTTGCCTTGCGGTATCCACAGATGCGAAAAGCCGTGTCACCAGGGCGTCTGTCTGCTGCCTTGCAAGCAGAAGTGTAACGTCAAGCGGCCCCAATGCGGGCATCCTTGCAACGCGATTTGTCACGAAGGAGCCTGTCCGAAGTCGGTCTGTAAATTTCCGGTTCCGATCACTTGTCAATGCGGACTTCAGAAAAGCACGAGGCTTTGCGTGGATTTGTCCGAGGAGTACTGGGGATTAGAGATGGCGCACTTGAAGGATAAAATGACGGATTTGTTGAAGGATCAGTCGGTCGATATTACAGATATCGTCAATAAAACCAAGAGACCGGCGATTCTGAAAATCCTTGATTGTACGGAAGAGTGTCGTGTTCTGGAGCGAAATCGCCGCTTAGCCATTGGACTGCAGATTCGCAATCCGGACTTGACGCAAAAGTTGACGCCTCGCTACTCGGATTTCATGAGAGGTTGGGCCAAAAAGGATCCCCAGTTCTGTCTGAAAATCCACGAAAAGCTGTCGGAACTGGTCCAATTGGCTAAGCAGAGTAAACAGAAAAGTCGTTCGCTTTCTTTCGAGAGTATGAACAGAGATAAGCGTCATTTCGTTCACGAATACGCCGAACATTTCGGTTGTGACAGTGCCGCCTATGATACGGAGCCTAATAGAAACGTCGTGGCTACCGCCATCAAGGATAAGTCTTGGTTGCCCAGTATGAGTCTTTTGGAGGTGATTCAGAGGGAGAACGGGCAAAGGAGAGTTCCGGGTCCCGTTCTGAGTAAGACTGTTTCCAATAAATCCGAAACTGTGGCTTTAAAGTTGTTGCCTGGAAGGTCATTGGCTCAAAGACCGAGTACTCCTCCTACCAGTGAACCTGTGGACTACTTCGAGAATCCCCCgctttaa
- Protein Sequence
- MSSSSCAVQHMSYWDPYQNQLHGQFPTYSEDHVQHFNGNMSYYDDQNPPQYGLAQQFTNNYRNEPGPSQVTSAYEYEAPPHEGGRPQQQRDGGAVRKPQNERRNWGNNGKKNERYGSGRTFHSRDQNSKRTPDEAANYPDNVPPLETSRNYEDGGKNQGNRNSYYQNNGRNRNYYQYEDRRFNYRSRDGNRQNYYGKNYNKSNGRNYEDYNNAPREKNTWRKSESTNSNRKCPGNITQKNLDAASQRERLEQMLSRRTLECLVCCEKVRHTDKVWSCGQCYLILHLNCTIAWADSSKVEKGWRCPACQNVCLEIPKQYFCYCGKSLEPRPVPGVIPHACGDPCMRKGRLCDHKCLILCHPGPCPDCNIMVSKSCGCGATQQTVKCSSDTDIVCTSICNKLLECGLHSCESQCHTGPCNPCEKILKQICFCGKVGRKVPCTLEHEGAISYACGDVCGKTLSCGNHKCDQLCHEGPCGDCVRDVDKVETCPCGRSKLATERTTCLDPIPCCDKICAKILDCGQPAAPHSCKEKCHEGECPPCPLTTLVRCRCGHMDKEVNCSQLTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHFCPLPCNHVLTCGQHRCYRTCHSGRCFPCTETSFEELYCECGANVLYPPIPCGTRPPVCNNPCSRGRPCGHEANHSCHTGACPPCTVLCKRWCYGKHEQRSAIPCCQEDFSCGLACGKPLPCGIHRCEKPCHQGVCLLPCKQKCNVKRPQCGHPCNAICHEGACPKSVCKFPVPITCQCGLQKSTRLCVDLSEEYWGLEMAHLKDKMTDLLKDQSVDITDIVNKTKRPAILKILDCTEECRVLERNRRLAIGLQIRNPDLTQKLTPRYSDFMRGWAKKDPQFCLKIHEKLSELVQLAKQSKQKSRSLSFESMNRDKRHFVHEYAEHFGCDSAAYDTEPNRNVVATAIKDKSWLPSMSLLEVIQRENGQRRVPGPVLSKTVSNKSETVALKLLPGRSLAQRPSTPPTSEPVDYFENPPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -